Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14389_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 3.6e-140 501.5 240 100.0
Ca_14797_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 3.4e-74 282.3 157 86.6
Ca_14410_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 2.9e-73 279.3 157 85.4
TPR.G12250 Trifolium pratense HOM05D003449 ORTHO05D004133 1.2e-71 273.9 228 62.7
Medtr3g029520 Medicago truncatula HOM05D003449 ORTHO05D004133 3.6e-68 262.3 173 74.0
LjContig00222g0025650 Lotus japonicus HOM05D003449 ORTHO05D004133 1.1e-59 234.2 173 67.6
Lj6g0003881 Lotus japonicus HOM05D003449 ORTHO05D004133 1.8e-59 233.4 173 67.6
arahy.Tifrunner.gnm1.ann1.D2PEHJ Arachis hypogaea HOM05D003449 ORTHO05D004133 3.1e-59 232.6 229 53.7
VMungo1215G1665 Vigna mungo HOM05D003449 ORTHO05D004133 4.0e-59 232.3 173 65.3
arahy.Tifrunner.gnm1.ann1.4WT42H Arachis hypogaea HOM05D003449 ORTHO05D004133 6.9e-59 231.5 158 68.4
arahy.Tifrunner.gnm1.ann1.MLK5V4 Arachis hypogaea HOM05D003449 ORTHO05D004133 8.9e-59 231.1 229 53.3
Glyma.11G010700 Glycine max HOM05D003449 ORTHO05D004133 1.2e-58 230.7 230 54.3
Lalb_Chr09g0320201 Lupinus albus HOM05D003449 ORTHO05D004133 1.2e-58 230.7 232 55.2
Phvul.007G277700 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.6e-55 220.3 157 65.6
Phvul.007G074100 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.9e-53 213.4 157 64.3
FAN05G5719 Fragaria x ananassa HOM05D003449 ORTHO05D004133 6.9e-51 204.9 161 62.1
FAN14G1536 Fragaria x ananassa HOM05D003449 ORTHO05D004133 6.9e-51 204.9 160 61.9
FvH4_6g52520 Fragaria vesca HOM05D003449 ORTHO05D004133 9.0e-51 204.5 160 61.9
FvH4_1g00120 Fragaria vesca HOM05D003449 ORTHO05D004133 7.6e-50 201.4 160 60.6
Haze_11115 Corylus avellana HOM05D003449 ORTHO05D004133 9.9e-50 201.1 228 49.1
FAN28G2575 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.2e-49 199.9 160 60.0
Cfa008526 Carpinus fangiana HOM05D003449 ORTHO05D004133 6.4e-49 198.4 228 48.2
CSS0008419 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 1.1e-48 197.6 157 61.8
RcHm_v2.0_Chr2g0084431 Rosa chinensis HOM05D003449 ORTHO05D004133 1.1e-48 197.6 173 56.6
CSS0013125 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 1.4e-48 197.2 157 61.8
vmacro17029 Vaccinium macrocarpon HOM05D003449 ORTHO05D004133 1.4e-48 197.2 156 60.3
CSS0049757 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 2.4e-48 196.4 157 61.1
QL10p065753 Quercus lobata HOM05D003449 ORTHO05D004133 2.4e-48 196.4 228 49.1
Phvul.002G039900 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 7.1e-48 194.9 158 59.5
QL10p064632 Quercus lobata HOM05D003449 ORTHO05D004133 1.2e-47 194.1 228 49.1
PGR031G2246 Punica granatum HOM05D003449 ORTHO05D004133 1.6e-47 193.7 157 59.2
GSVIVG01038259001 Vitis vinifera HOM05D003449 ORTHO05D004133 1.6e-47 193.7 173 54.9
ECA248G0698 Erigeron canadensis HOM05D003449 ORTHO05D004133 2.7e-47 193.0 160 58.1
Ciclev10019560m.g Citrus clementina HOM05D003449 ORTHO05D004133 6.0e-47 191.8 228 46.9
Dinv24747 Davidia involucrata HOM05D003449 ORTHO05D004133 1.0e-46 191.0 173 56.6
Potri.017G002000 Populus trichocarpa HOM05D003449 ORTHO05D004133 1.3e-46 190.7 229 47.6
Prupe.7G270600 Prunus persica HOM05D003449 ORTHO05D004133 1.3e-46 190.7 157 57.3
Duzib128G1428 Durio zibethinus HOM05D003449 ORTHO05D004133 2.3e-46 189.9 162 58.6
Atru.chr8.1212 Acer truncatum HOM05D003449 ORTHO05D004133 3.0e-46 189.5 173 53.2
Rhsim02G0176000 Rhododendron simsii HOM05D003449 ORTHO05D004133 3.0e-46 189.5 157 59.9
CiPaw.01G202400 Carya illinoinensis HOM05D003449 ORTHO05D004133 3.9e-46 189.1 160 58.1
Rhsim09G0002700 Rhododendron simsii HOM05D003449 ORTHO05D004133 6.7e-46 188.3 157 59.2
Thecc.05G001100 Theobroma cacao HOM05D003449 ORTHO05D004133 8.7e-46 188.0 162 56.2
Actinidia18391 Actinidia chinensis HOM05D003449 ORTHO05D004133 1.1e-45 187.6 157 58.6
HanXRQChr11g0343511 Helianthus annuus HOM05D003449 ORTHO05D004133 1.1e-45 187.6 157 57.3
Nn1g09408 Nelumbo nucifera HOM05D003449 ORTHO05D004133 4.3e-45 185.7 157 56.7
PGR042G0752 Punica granatum HOM05D003449 ORTHO05D004133 4.3e-45 185.7 157 53.5
Lsat_1_v5_gn_1_77061 Lactuca sativa HOM05D003449 ORTHO05D004133 5.6e-45 185.3 160 58.1
Manes.05G207700 Manihot esculenta HOM05D003449 ORTHO05D004133 5.6e-45 185.3 157 56.1
CANSAT54G1991 Cannabis sativa HOM05D003449 ORTHO05D004133 9.6e-45 184.5 228 47.8
Ah.07g203300 Amaranthus hybridus HOM05D003449 ORTHO05D004133 1.6e-44 183.7 157 54.8
COL.COLO4_20652 Corchorus olitorius HOM05D003449 ORTHO05D004133 1.6e-44 183.7 142 60.6
EL10Ac3g06174 Beta vulgaris HOM05D003449 ORTHO05D004133 2.8e-44 183.0 157 56.7
Gohir.A01G231600 Gossypium hirsutum HOM05D003449 ORTHO05D004133 2.8e-44 183.0 162 56.8
Gohir.D01G221700 Gossypium hirsutum HOM05D003449 ORTHO05D004133 2.8e-44 183.0 162 56.8
Gorai.002G268300 Gossypium raimondii HOM05D003449 ORTHO05D004133 2.8e-44 183.0 162 56.8
MD15G1142600 Malus domestica HOM05D003449 ORTHO05D004133 2.8e-44 183.0 230 45.7
Potri.007G145800 Populus trichocarpa HOM05D003449 ORTHO05D004133 2.8e-44 183.0 157 57.3
Aqoxy4G00018 Aquilegia oxysepala HOM05D003449 ORTHO05D004133 4.8e-44 182.2 157 56.1
BraA04t17976Z Brassica rapa HOM05D003449 ORTHO05D004133 4.8e-44 182.2 228 45.6
SGA_v2.0_scaffold319G48551 Striga asiatica HOM05D003449 ORTHO05D004133 6.2e-44 181.8 157 54.8
A04p24550 Brassica napus HOM05D003449 ORTHO05D004133 8.1e-44 181.4 228 45.6
Sc25g0002200 Simmondsia chinensis HOM05D003449 ORTHO05D004133 1.1e-43 181.0 157 55.4
Sopen12g008760 Solanum pennellii HOM05D003449 ORTHO05D004133 1.1e-43 181.0 157 54.8
BcaC02g07961 Brassica carinata HOM05D003449 ORTHO05D004133 1.8e-43 180.3 157 54.8
BcaB06g28571 Brassica carinata HOM05D003449 ORTHO05D004133 2.4e-43 179.9 157 54.8
C04p61440 Brassica napus HOM05D003449 ORTHO05D004133 2.4e-43 179.9 157 54.8
BolC4t27628H Brassica oleracea HOM05D003449 ORTHO05D004133 2.4e-43 179.9 157 54.8
AL4G27160 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 4.0e-43 179.1 228 44.7
Thhalv10016696m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 5.3e-43 178.7 228 43.4
ClCG06G009820 Citrullus lanatus HOM05D003449 ORTHO05D004133 9.0e-43 177.9 142 60.6
THA.LOC104800937 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.5e-42 177.2 158 53.8
Migut.G00914 Erythranthe guttata HOM05D003449 ORTHO05D004133 2.0e-42 176.8 157 54.8
CsaV3_2G011270 Cucumis sativus L. HOM05D003449 ORTHO05D004133 2.6e-42 176.4 157 54.8
SEGI_19112 Sequoiadendron giganteum HOM05D003449 ORTHO05D004133 3.4e-42 176.0 157 54.8
Cpa.g.sc9.246 Carica papaya HOM05D003449 ORTHO05D004133 7.6e-42 174.9 157 55.4
ATR0743G113 Amborella trichopoda HOM05D003449 ORTHO05D004133 1.3e-41 174.1 151 54.3
AUR62023694 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.3e-41 174.1 173 51.4
Gohir.D04G099801 Gossypium hirsutum HOM05D003449 ORTHO05D004133 1.3e-41 174.1 146 60.3
Sp4g14220 Schrenkiella parvula HOM05D003449 ORTHO05D004133 1.3e-41 174.1 157 52.9
CARHR125560 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.7e-41 173.7 207 47.3
PSO675G3012 Papaver somniferum HOM05D003449 ORTHO05D004133 2.2e-41 173.3 157 52.9
MELO3C031172.2 Cucumis melo HOM05D003449 ORTHO05D004133 2.9e-41 172.9 157 54.1
SHI01241 Sapria himalayana HOM05D003449 ORTHO05D004133 2.9e-41 172.9 161 54.7
Sed0014321 Sechium edule HOM05D003449 ORTHO05D004133 3.8e-41 172.6 157 54.1
Nitab4.5_0000160g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 4.9e-41 172.2 169 50.9
Aa31LG5G5180 Aethionema arabicum HOM05D003449 ORTHO05D004133 8.4e-41 171.4 140 56.4
Eucgr.A00416 Eucalyptus grandis HOM05D003449 ORTHO05D004133 8.4e-41 171.4 158 53.8
Carub.0004s1317 Capsella rubella HOM05D003449 ORTHO05D004133 1.1e-40 171.0 228 44.7
EL10Ac3g06177 Beta vulgaris HOM05D003449 ORTHO05D004133 1.4e-40 170.6 166 53.0
A05p13710 Brassica napus HOM05D003449 ORTHO05D004133 2.4e-40 169.9 165 54.5
Aa31sc989G10 Aethionema arabicum HOM05D003449 ORTHO05D004133 4.2e-40 169.1 158 55.1
BraA05t20307Z Brassica rapa HOM05D003449 ORTHO05D004133 5.5e-40 168.7 165 54.5
A04p24130 Brassica napus HOM05D003449 ORTHO05D004133 7.1e-40 168.3 157 51.6
BraA04t17933Z Brassica rapa HOM05D003449 ORTHO05D004133 7.1e-40 168.3 157 51.6
TWI63G1020 Tripterygium wilfordii HOM05D003449 ORTHO05D004133 7.1e-40 168.3 170 52.4
C04p17950 Brassica napus HOM05D003449 ORTHO05D004133 1.2e-39 167.5 164 54.3
BolC4t23342H Brassica oleracea HOM05D003449 ORTHO05D004133 1.2e-39 167.5 164 54.3
CAN.G566.43 Capsicum annuum HOM05D003449 ORTHO05D004133 1.2e-39 167.5 157 52.9
HPP92_007025 Vanilla planifolia HOM05D003449 ORTHO05D004133 1.2e-39 167.5 160 50.6
AT2G31870 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 2.1e-39 166.8 228 43.4
Carub.0004s1301 Capsella rubella HOM05D003449 ORTHO05D004133 2.1e-39 166.8 157 52.9
Nitab4.5_0001110g0060 Nicotiana tabacum HOM05D003449 ORTHO05D004133 2.1e-39 166.8 158 53.8
Oeu050305.2 Olea europaea HOM05D003449 ORTHO05D004133 2.1e-39 166.8 194 46.4
Sopen12g032430 Solanum pennellii HOM05D003449 ORTHO05D004133 2.1e-39 166.8 157 52.2
BcaB06g28530 Brassica carinata HOM05D003449 ORTHO05D004133 2.7e-39 166.4 157 50.3
THA.LOC104800938 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 3.5e-39 166.0 158 51.3
HPP92_007075 Vanilla planifolia HOM05D003449 ORTHO05D004133 3.5e-39 166.0 160 50.6
BcaC02g11292 Brassica carinata HOM05D003449 ORTHO05D004133 4.6e-39 165.6 164 53.7
Cc03_g16150 Coffea canephora HOM05D003449 ORTHO05D004133 4.6e-39 165.6 160 53.1
SGA_v2.0_scaffold12G06234 Striga asiatica HOM05D003449 ORTHO05D004133 4.6e-39 165.6 160 50.0
CARHR125360 Cardamine hirsuta HOM05D003449 ORTHO05D004133 6.0e-39 165.2 182 47.3
Sabra07G0115300 Salix brachista HOM05D003449 ORTHO05D004133 1.0e-38 164.5 157 54.8
BolC4t27577H Brassica oleracea HOM05D003449 ORTHO05D004133 2.3e-38 163.3 157 49.7
CDE02G4666 Ceratophyllum demersum HOM05D003449 ORTHO05D004133 2.3e-38 163.3 166 51.2
PGSC0003DMG400029361 Solanum tuberosum HOM05D003449 ORTHO05D004133 2.3e-38 163.3 157 51.0
Zm00001eb064190 Zea mays HOM05D003449 ORTHO05D004133 2.3e-38 163.3 161 50.3
CARHR125550 Cardamine hirsuta HOM05D003449 ORTHO05D004133 3.9e-38 162.5 157 51.0
THA.LOC104800934 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 5.1e-38 162.2 158 51.9
C04p60860 Brassica napus HOM05D003449 ORTHO05D004133 6.7e-38 161.8 157 49.0
PSO675G3785 Papaver somniferum HOM05D003449 ORTHO05D004133 3.3e-37 159.5 164 49.4
AUR62002371 Chenopodium quinoa HOM05D003449 ORTHO05D004133 5.6e-37 158.7 159 49.1
AL4G27130 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 7.4e-37 158.3 158 53.2
Carub.0004s1316 Capsella rubella HOM05D003449 ORTHO05D004133 2.1e-36 156.8 160 51.9
THA.LOC104800936 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 3.7e-36 156.0 157 50.3
BraA04t17975Z Brassica rapa HOM05D003449 ORTHO05D004133 4.8e-36 155.6 159 48.4
Thhalv10016528m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 6.2e-36 155.2 157 51.0
Thhalv10017878m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 6.2e-36 155.2 190 44.7
BcaC02g07962 Brassica carinata HOM05D003449 ORTHO05D004133 8.2e-36 154.8 159 48.4
Carub.0004s1315 Capsella rubella HOM05D003449 ORTHO05D004133 8.2e-36 154.8 159 51.6
BcaB02g10421 Brassica carinata HOM05D003449 ORTHO05D004133 1.4e-35 154.1 194 43.8
A04p24530 Brassica napus HOM05D003449 ORTHO05D004133 1.8e-35 153.7 159 47.8
SGA_v2.0_scaffold37G14903 Striga asiatica HOM05D003449 ORTHO05D004133 1.8e-35 153.7 158 48.7
BcaB06g28570 Brassica carinata HOM05D003449 ORTHO05D004133 2.4e-35 153.3 157 48.4
C04p61430 Brassica napus HOM05D003449 ORTHO05D004133 2.4e-35 153.3 159 48.4
BolC4t27627H Brassica oleracea HOM05D003449 ORTHO05D004133 2.4e-35 153.3 159 48.4
EL10Ac1g02221 Beta vulgaris HOM05D003449 ORTHO05D004133 9.0e-35 151.4 196 43.4
AT2G31865 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 2.0e-34 150.2 160 50.6
AL4G27150 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 3.4e-34 149.4 160 50.6
Sp2g03830 Schrenkiella parvula HOM05D003449 ORTHO05D004133 7.6e-34 148.3 157 49.0
CARHR125540 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.0e-33 147.9 159 48.4
MBI07_g42065_MAGBIO Magnolia biondii HOM05D003449 ORTHO05D004133 1.4e-32 144.1 157 48.4
SGA_v2.0_scaffold215G42309 Striga asiatica HOM05D003449 ORTHO05D004133 1.4e-32 144.1 161 46.0
SMO364G0163 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 5.5e-32 142.1 161 44.1
Atru.chr8.1215 Acer truncatum HOM05D003449 ORTHO05D004133 1.2e-31 141.0 123 52.8
Ah.06g182940 Amaranthus hybridus HOM05D003449 ORTHO05D004133 4.6e-31 139.0 139 51.1
Phvul.002G040000 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 6.0e-31 138.7 124 55.6
CAN.G1011.3 Capsicum annuum HOM05D003449 ORTHO05D004133 1.8e-30 137.1 123 52.0
Peaxi162Scf00459g00129 Petunia axillaris HOM05D003449 ORTHO05D004133 3.0e-30 136.3 157 49.0
CBR_g41704 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-30 135.2 161 47.2
SalBow3G3320 Salvia bowleyana HOM05D003449 ORTHO05D004133 1.9e-29 133.7 120 50.8
Sabra17G0006000 Salix brachista HOM05D003449 ORTHO05D004133 3.3e-29 132.9 234 38.0
Pp3c4_17510 Physcomitrium patens HOM05D003449 ORTHO05D004133 7.4e-29 131.7 162 41.4
Gorai.009G402700 Gossypium raimondii HOM05D003449 ORTHO05D004133 2.8e-28 129.8 150 48.0
Lj6C291G1 Lonicera japonica HOM05D003449 ORTHO05D004133 1.1e-27 127.9 112 56.2
Nitab4.5_0007046g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 2.4e-27 126.7 104 56.7
BcaB06g28446 Brassica carinata HOM05D003449 ORTHO05D004133 6.9e-27 125.2 204 40.2
Mapoly0009s0113 Marchantia polymorpha HOM05D003449 ORTHO05D004133 6.9e-27 125.2 163 40.5
SMO351G0652 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 5.0e-25 119.0 161 37.3
Nitab4.5_0003108g0040 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.9e-24 117.1 129 49.6
Pp3c3_12290 Physcomitrium patens HOM05D003449 ORTHO05D004133 3.2e-24 116.3 157 38.2
AUR62023816 Chenopodium quinoa HOM05D003449 ORTHO05D004133 7.2e-24 115.2 121 43.8
Os03g0843900 Oryza sativa ssp. japonica HOM05D003449 ORTHO05D004133 7.2e-24 115.2 106 50.0
Hund22678 Selenicereus undatus HOM05D003449 ORTHO05D004133 7.9e-23 111.7 121 45.5
AUR62002491 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.8e-22 110.5 157 42.7
unitig_92.g28209 Utricularia gibba HOM05D003449 ORTHO05D004133 2.3e-22 110.2 98 50.0
Oeu022914.1 Olea europaea HOM05D003449 ORTHO05D004133 1.5e-21 107.5 88 56.8
MD02G1000300 Malus domestica HOM05D003449 ORTHO05D004133 2.5e-21 106.7 117 46.2
EL10Ac4g08586 Beta vulgaris HOM05D003449 ORTHO05D000563 1.9e-16 90.5 67 64.2
Peaxi162Scf00057g02231 Petunia axillaris HOM05D003449 ORTHO05D004133 1.8e-14 84.0 67 58.2
TAR362G0584 Trochodendron aralioides HOM05D003449 ORTHO05D004133 3.3e-13 79.7 67 59.7
DCAR_011557 Daucus carota HOM05D003449 ORTHO05D004133 7.4e-13 78.6 156 34.6
FAN23G2573 Fragaria x ananassa HOM05D003449 ORTHO05D004133 3.6e-07 59.7 54 51.9
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 3.6e-07 59.7 54 51.9


User provided reference genes

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