Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14388_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 5.4e-98 360.9 174 100.0
Ca_14797_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 1.1e-85 320.1 162 94.4
Ca_14410_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 1.8e-85 319.3 164 93.9
TPR.G12250 Trifolium pratense HOM05D003449 ORTHO05D004133 3.5e-73 278.5 162 84.0
Medtr3g029520 Medicago truncatula HOM05D003449 ORTHO05D004133 9.0e-69 263.8 164 79.9
Glyma.11G010700 Glycine max HOM05D003449 ORTHO05D004133 2.8e-62 242.3 167 73.1
Lj6g0003881 Lotus japonicus HOM05D003449 ORTHO05D004133 8.2e-62 240.7 169 74.0
arahy.Tifrunner.gnm1.ann1.D2PEHJ Arachis hypogaea HOM05D003449 ORTHO05D004133 3.1e-61 238.8 169 71.6
VMungo1215G1665 Vigna mungo HOM05D003449 ORTHO05D004133 3.1e-61 238.8 169 73.4
arahy.Tifrunner.gnm1.ann1.4WT42H Arachis hypogaea HOM05D003449 ORTHO05D004133 6.9e-61 237.7 169 71.0
LjContig00222g0025650 Lotus japonicus HOM05D003449 ORTHO05D004133 1.5e-60 236.5 169 72.8
arahy.Tifrunner.gnm1.ann1.MLK5V4 Arachis hypogaea HOM05D003449 ORTHO05D004133 2.0e-60 236.1 169 71.0
Lalb_Chr09g0320201 Lupinus albus HOM05D003449 ORTHO05D004133 2.5e-58 229.2 163 70.6
Phvul.007G277700 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 2.5e-58 229.2 167 70.1
Phvul.007G074100 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.2e-57 226.9 169 69.8
Phvul.002G040000 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 5.7e-55 218.0 167 67.1
Cfa008526 Carpinus fangiana HOM05D003449 ORTHO05D004133 8.2e-54 214.2 172 61.6
Phvul.002G039900 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 2.4e-53 212.6 167 64.7
RcHm_v2.0_Chr2g0084431 Rosa chinensis HOM05D003449 ORTHO05D004133 2.6e-52 209.1 166 60.8
Haze_11115 Corylus avellana HOM05D003449 ORTHO05D004133 1.0e-51 207.2 171 60.2
CANSAT54G1991 Cannabis sativa HOM05D003449 ORTHO05D004133 1.7e-51 206.5 184 57.6
Prupe.7G270600 Prunus persica HOM05D003449 ORTHO05D004133 5.0e-51 204.9 186 57.0
Gohir.D01G221700 Gossypium hirsutum HOM05D003449 ORTHO05D004133 8.5e-51 204.1 169 60.9
Gorai.002G268300 Gossypium raimondii HOM05D003449 ORTHO05D004133 8.5e-51 204.1 169 60.9
FAN05G5719 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.5e-50 202.6 164 60.4
Gohir.A01G231600 Gossypium hirsutum HOM05D003449 ORTHO05D004133 4.2e-50 201.8 169 60.4
FAN23G2573 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.1e-49 199.5 164 60.4
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.1e-49 199.5 164 60.4
QL10p064632 Quercus lobata HOM05D003449 ORTHO05D004133 2.7e-49 199.1 191 52.9
QL10p065753 Quercus lobata HOM05D003449 ORTHO05D004133 2.7e-49 199.1 191 52.9
CAN.G566.43 Capsicum annuum HOM05D003449 ORTHO05D004133 2.3e-48 196.1 179 55.9
FAN28G2575 Fragaria x ananassa HOM05D003449 ORTHO05D004133 1.1e-47 193.7 164 58.5
Sc25g0002200 Simmondsia chinensis HOM05D003449 ORTHO05D004133 1.5e-47 193.4 189 53.4
Nitab4.5_0003108g0040 Nicotiana tabacum HOM05D003449 ORTHO05D004133 2.0e-47 193.0 188 52.1
COL.COLO4_20652 Corchorus olitorius HOM05D003449 ORTHO05D004133 3.3e-47 192.2 186 54.3
FvH4_6g52520 Fragaria vesca HOM05D003449 ORTHO05D004133 3.3e-47 192.2 164 58.5
FAN14G1536 Fragaria x ananassa HOM05D003449 ORTHO05D004133 4.4e-47 191.8 164 58.5
Solyc12g096610.2 Solanum lycopersicum HOM05D003449 ORTHO05D004133 5.7e-47 191.4 177 55.4
Nitab4.5_0001110g0060 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.7e-46 189.9 187 52.4
CSS0049757 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 2.2e-46 189.5 186 53.8
Sed0014321 Sechium edule HOM05D003449 ORTHO05D004133 2.8e-46 189.1 169 56.8
PGSC0003DMG400029361 Solanum tuberosum HOM05D003449 ORTHO05D004133 4.8e-46 188.3 182 54.4
Ciclev10019560m.g Citrus clementina HOM05D003449 ORTHO05D004133 6.3e-46 188.0 188 53.7
GSVIVG01038259001 Vitis vinifera HOM05D003449 ORTHO05D004133 6.3e-46 188.0 185 54.1
CSS0008419 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 8.2e-46 187.6 186 53.8
Atru.chr8.1212 Acer truncatum HOM05D003449 ORTHO05D004133 1.1e-45 187.2 182 52.2
Nn1g09408 Nelumbo nucifera HOM05D003449 ORTHO05D004133 1.8e-45 186.4 185 54.6
CSS0013125 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 2.4e-45 186.0 186 53.2
MD15G1142600 Malus domestica HOM05D003449 ORTHO05D004133 2.4e-45 186.0 187 48.7
PSO675G3012 Papaver somniferum HOM05D003449 ORTHO05D004133 3.1e-45 185.7 177 53.1
HanXRQChr11g0343511 Helianthus annuus HOM05D003449 ORTHO05D004133 4.1e-45 185.3 164 56.7
TWI63G1020 Tripterygium wilfordii HOM05D003449 ORTHO05D004133 4.1e-45 185.3 187 52.9
Dinv24747 Davidia involucrata HOM05D003449 ORTHO05D004133 5.3e-45 184.9 186 51.6
DCAR_011557 Daucus carota HOM05D003449 ORTHO05D004133 9.1e-45 184.1 166 54.8
Lsat_1_v5_gn_1_77061 Lactuca sativa HOM05D003449 ORTHO05D004133 3.5e-44 182.2 164 53.0
Cc03_g16150 Coffea canephora HOM05D003449 ORTHO05D004133 4.5e-44 181.8 186 53.2
Oeu022914.1 Olea europaea HOM05D003449 ORTHO05D004133 4.5e-44 181.8 178 52.2
Oeu050305.2 Olea europaea HOM05D003449 ORTHO05D004133 4.5e-44 181.8 178 52.2
Eucgr.A00416 Eucalyptus grandis HOM05D003449 ORTHO05D004133 5.9e-44 181.4 182 50.5
SHI01241 Sapria himalayana HOM05D003449 ORTHO05D004133 5.9e-44 181.4 184 50.5
EL10Ac3g06174 Beta vulgaris HOM05D003449 ORTHO05D004133 1.3e-43 180.3 177 51.4
BcaC02g07961 Brassica carinata HOM05D003449 ORTHO05D004133 1.3e-43 180.3 180 52.8
TAR362G0102 Trochodendron aralioides HOM05D003449 ORTHO05D003376 1.7e-43 179.9 183 51.9
BraA04t17976Z Brassica rapa HOM05D003449 ORTHO05D004133 2.2e-43 179.5 181 52.5
ECA248G0698 Erigeron canadensis HOM05D003449 ORTHO05D004133 2.2e-43 179.5 163 52.8
Actinidia18391 Actinidia chinensis HOM05D003449 ORTHO05D004133 2.9e-43 179.1 186 51.6
SalBow3G3320 Salvia bowleyana HOM05D003449 ORTHO05D004133 2.9e-43 179.1 171 54.4
Sabra07G0115300 Salix brachista HOM05D003449 ORTHO05D004133 3.8e-43 178.7 181 53.0
Sopen12g008760 Solanum pennellii HOM05D003449 ORTHO05D004133 6.5e-43 177.9 182 53.3
Atru.chr8.1215 Acer truncatum HOM05D003449 ORTHO05D004133 1.1e-42 177.2 181 49.7
Ah.07g203300 Amaranthus hybridus HOM05D003449 ORTHO05D004133 1.1e-42 177.2 180 52.8
BcaB06g28571 Brassica carinata HOM05D003449 ORTHO05D004133 1.1e-42 177.2 183 51.9
Solyc12g017920.3 Solanum lycopersicum HOM05D003449 ORTHO05D004133 1.5e-42 176.8 182 52.7
SGA_v2.0_scaffold319G48551 Striga asiatica HOM05D003449 ORTHO05D004133 1.5e-42 176.8 163 55.2
CAN.G1011.3 Capsicum annuum HOM05D003449 ORTHO05D004133 1.9e-42 176.4 185 51.9
Peaxi162Scf00459g00129 Petunia axillaris HOM05D003449 ORTHO05D004133 2.5e-42 176.0 185 50.3
CsaV3_2G011270 Cucumis sativus L. HOM05D003449 ORTHO05D004133 5.5e-42 174.9 169 52.1
C04p61440 Brassica napus HOM05D003449 ORTHO05D004133 7.2e-42 174.5 179 52.0
BolC4t27628H Brassica oleracea HOM05D003449 ORTHO05D004133 7.2e-42 174.5 179 52.0
SGA_v2.0_scaffold215G42309 Striga asiatica HOM05D003449 ORTHO05D004133 7.2e-42 174.5 163 55.8
Aqoxy4G00018 Aquilegia oxysepala HOM05D003449 ORTHO05D004133 9.4e-42 174.1 183 52.5
A04p24550 Brassica napus HOM05D003449 ORTHO05D004133 9.4e-42 174.1 181 50.8
THA.LOC104800934 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.2e-41 173.7 166 51.8
AT2G31870 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 1.6e-41 173.3 184 50.0
Potri.007G145800 Populus trichocarpa HOM05D003449 ORTHO05D004133 2.1e-41 172.9 186 48.9
AL4G27160 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 2.7e-41 172.6 185 49.2
Carub.0004s1317 Capsella rubella HOM05D003449 ORTHO05D004133 2.7e-41 172.6 171 52.0
THA.LOC104800938 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 2.7e-41 172.6 185 48.6
PGR031G2246 Punica granatum HOM05D003449 ORTHO05D004133 3.6e-41 172.2 184 48.4
Aa31LG5G5180 Aethionema arabicum HOM05D003449 ORTHO05D004133 6.1e-41 171.4 183 50.8
Potri.017G002000 Populus trichocarpa HOM05D003449 ORTHO05D004133 1.0e-40 170.6 187 47.6
EL10Ac3g06177 Beta vulgaris HOM05D003449 ORTHO05D004133 1.4e-40 170.2 172 49.4
Migut.G00914 Erythranthe guttata HOM05D003449 ORTHO05D004133 3.0e-40 169.1 165 52.1
unitig_92.g28210 Utricularia gibba HOM05D003449 ORTHO05D004133 5.2e-40 168.3 163 54.6
PGR042G0752 Punica granatum HOM05D003449 ORTHO05D004133 1.2e-39 167.2 175 50.3
Sp4g14220 Schrenkiella parvula HOM05D003449 ORTHO05D004133 1.2e-39 167.2 185 48.6
THA.LOC104800936 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.5e-39 166.8 174 50.6
EL10Ac1g02221 Beta vulgaris HOM05D003449 ORTHO05D004133 2.0e-39 166.4 163 50.3
AUR62002491 Chenopodium quinoa HOM05D003449 ORTHO05D004133 2.0e-39 166.4 201 46.8
Aa31sc989G10 Aethionema arabicum HOM05D003449 ORTHO05D004133 7.5e-39 164.5 162 48.8
AL4G27150 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 9.7e-39 164.1 163 48.5
BcaC02g11292 Brassica carinata HOM05D003449 ORTHO05D004133 1.3e-38 163.7 164 50.0
C04p17950 Brassica napus HOM05D003449 ORTHO05D004133 1.3e-38 163.7 164 50.0
BolC4t23342H Brassica oleracea HOM05D003449 ORTHO05D004133 1.3e-38 163.7 164 50.0
Carub.0004s1316 Capsella rubella HOM05D003449 ORTHO05D004133 1.7e-38 163.3 168 48.8
CARHR125540 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.7e-38 163.3 164 47.6
Sp2g03830 Schrenkiella parvula HOM05D003449 ORTHO05D004133 1.7e-38 163.3 164 50.0
Carub.0004s1315 Capsella rubella HOM05D003449 ORTHO05D004133 2.2e-38 162.9 164 48.2
Carub.0004s1301 Capsella rubella HOM05D003449 ORTHO05D004133 4.8e-38 161.8 164 49.4
Thhalv10017878m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 4.8e-38 161.8 164 50.6
MBI07_g42065_MAGBIO Magnolia biondii HOM05D003449 ORTHO05D004133 4.8e-38 161.8 214 45.8
AT2G31865 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 8.2e-38 161.0 168 48.2
A05p13710 Brassica napus HOM05D003449 ORTHO05D004133 1.1e-37 160.6 164 50.6
BcaC02g07962 Brassica carinata HOM05D003449 ORTHO05D004133 1.8e-37 159.8 163 50.9
C04p61430 Brassica napus HOM05D003449 ORTHO05D004133 1.8e-37 159.8 163 50.9
BolC4t27627H Brassica oleracea HOM05D003449 ORTHO05D004133 1.8e-37 159.8 163 50.9
Ah.06g182940 Amaranthus hybridus HOM05D003449 ORTHO05D004133 2.4e-37 159.5 163 48.5
BraA04t17975Z Brassica rapa HOM05D003449 ORTHO05D004133 2.4e-37 159.5 163 50.9
BcaB02g10421 Brassica carinata HOM05D003449 ORTHO05D004133 3.1e-37 159.1 164 48.8
ATR0743G113 Amborella trichopoda HOM05D003449 ORTHO05D004133 4.1e-37 158.7 196 45.9
SGA_v2.0_scaffold12G06234 Striga asiatica HOM05D003449 ORTHO05D004133 4.1e-37 158.7 163 50.9
BcaB06g28570 Brassica carinata HOM05D003449 ORTHO05D004133 9.1e-37 157.5 163 49.1
CiPaw.01G202400 Carya illinoinensis HOM05D003449 ORTHO05D004133 9.1e-37 157.5 171 49.1
Sabra17G0006000 Salix brachista HOM05D003449 ORTHO05D004133 9.1e-37 157.5 205 43.4
CDE02G4666 Ceratophyllum demersum HOM05D003449 ORTHO05D004133 1.2e-36 157.1 194 44.8
Sopen12g032430 Solanum pennellii HOM05D003449 ORTHO05D004133 1.6e-36 156.8 155 52.9
AUR62023816 Chenopodium quinoa HOM05D003449 ORTHO05D004133 2.0e-36 156.4 164 45.7
Thhalv10016528m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 2.7e-36 156.0 167 48.5
Zm00001eb064190 Zea mays HOM05D003449 ORTHO05D004133 1.0e-35 154.1 163 47.9
HPP92_007025 Vanilla planifolia HOM05D003449 ORTHO05D004133 1.7e-35 153.3 187 46.0
BraA05t20307Z Brassica rapa HOM05D003449 ORTHO05D004133 2.9e-35 152.5 164 48.8
C04p60860 Brassica napus HOM05D003449 ORTHO05D004133 3.8e-35 152.1 163 47.9
AUR62002371 Chenopodium quinoa HOM05D003449 ORTHO05D004133 3.8e-35 152.1 166 48.2
Lj6C291G1 Lonicera japonica HOM05D003449 ORTHO05D004133 3.8e-35 152.1 168 50.0
THA.LOC104800937 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 3.8e-35 152.1 165 49.7
BcaB06g28530 Brassica carinata HOM05D003449 ORTHO05D004133 5.0e-35 151.8 162 48.1
HPP92_007075 Vanilla planifolia HOM05D003449 ORTHO05D004133 5.0e-35 151.8 187 44.9
Nitab4.5_0000160g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.1e-34 150.6 164 52.4
SEGI_19112 Sequoiadendron giganteum HOM05D003449 ORTHO05D004133 1.1e-34 150.6 183 41.5
BraA04t17933Z Brassica rapa HOM05D003449 ORTHO05D004133 1.5e-34 150.2 163 48.5
Nitab4.5_0007046g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.5e-34 150.2 167 52.1
SGA_v2.0_scaffold37G14903 Striga asiatica HOM05D003449 ORTHO05D004133 2.5e-34 149.4 175 43.4
Peaxi162Scf00057g02231 Petunia axillaris HOM05D003449 ORTHO05D004133 4.2e-34 148.7 168 49.4
MELO3C031172.2 Cucumis melo HOM05D003449 ORTHO05D004133 7.2e-34 147.9 154 48.7
BolC4t27577H Brassica oleracea HOM05D003449 ORTHO05D004133 9.4e-34 147.5 163 46.6
Manes.05G207700 Manihot esculenta HOM05D003449 ORTHO05D004133 1.8e-32 143.3 152 52.0
Rhsim02G0176000 Rhododendron simsii HOM05D003449 ORTHO05D004133 2.3e-32 142.9 163 48.5
Hund22678 Selenicereus undatus HOM05D003449 ORTHO05D004133 6.8e-32 141.4 152 52.0
PSO675G3785 Papaver somniferum HOM05D003449 ORTHO05D004133 8.8e-32 141.0 164 45.7
SMO364G0163 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 7.0e-29 131.3 163 42.3
AUR62023697 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.6e-28 130.2 131 53.4
A04p24530 Brassica napus HOM05D003449 ORTHO05D004133 1.7e-27 126.7 141 48.2
CARHR125550 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.7e-27 126.7 146 45.9
Duzib128G1428 Durio zibethinus HOM05D003449 ORTHO05D004133 2.3e-27 126.3 117 53.8
SMO351G0652 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 3.8e-27 125.6 152 43.4
CARHR125360 Cardamine hirsuta HOM05D003449 ORTHO05D004133 5.0e-27 125.2 141 44.7
Pp3c4_17510 Physcomitrium patens HOM05D003449 ORTHO05D004133 8.6e-27 124.4 200 35.0
Mapoly0009s0113 Marchantia polymorpha HOM05D003449 ORTHO05D004133 4.2e-26 122.1 178 40.4
vmacro17029 Vaccinium macrocarpon HOM05D003449 ORTHO05D004133 2.8e-25 119.4 244 34.4
AL4G27130 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 9.8e-23 110.9 128 42.2
Pp3c3_12290 Physcomitrium patens HOM05D003449 ORTHO05D004133 1.4e-21 107.1 152 39.5
BcaB06g28446 Brassica carinata HOM05D003449 ORTHO05D004133 4.5e-20 102.1 176 37.5
ClCG06G009800 Citrullus lanatus HOM05D003449 ORTHO05D004133 8.0e-17 91.3 108 47.2
Cpa.g.sc9.246 Carica papaya HOM05D003449 ORTHO05D004133 3.0e-16 89.4 115 44.3
Thhalv10016696m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 3.0e-16 89.4 69 59.4
CBR_g41704 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-16 89.0 321 24.6
Thecc.05G001100 Theobroma cacao HOM05D003449 ORTHO05D004133 3.4e-15 85.9 58 67.2
A04p24130 Brassica napus HOM05D003449 ORTHO05D004133 1.3e-14 84.0 60 63.3
FvH4_1g00120 Fragaria vesca HOM05D003449 ORTHO05D004133 3.7e-14 82.4 50 72.0
ClCG06G009820 Citrullus lanatus HOM05D003449 ORTHO05D004133 9.5e-10 67.8 47 63.8


User provided reference genes

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