Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 5.9e-111 404.4 240 100.0
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 4.1e-96 355.1 239 87.0
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 2.8e-92 342.4 209 88.0
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 2.6e-90 335.9 247 83.0
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 2.7e-87 325.9 209 77.0
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 3.5e-87 325.5 200 80.5
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 4.6e-87 325.1 209 78.0
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 7.8e-87 324.3 208 77.4
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 1.7e-86 323.2 208 76.4
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 5.0e-86 321.6 182 83.0
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 2.5e-85 319.3 213 77.5
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 2.8e-84 315.8 180 85.0
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.8e-84 315.8 181 84.5
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 3.6e-84 315.5 182 83.5
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.7e-84 315.1 177 85.9
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 6.2e-84 314.7 210 75.7
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 1.8e-83 313.2 212 74.1
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 3.1e-83 312.4 183 83.1
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 5.2e-83 311.6 179 83.2
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 6.8e-83 311.2 209 75.6
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 8.9e-83 310.8 173 84.4
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 1.2e-82 310.5 199 74.9
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 1.5e-82 310.1 208 72.6
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.5e-82 310.1 184 80.4
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.0e-82 309.7 179 81.6
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.4e-82 308.9 219 75.3
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 4.4e-82 308.5 182 83.0
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 5.8e-82 308.1 182 81.9
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 7.5e-82 307.8 209 73.2
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 7.5e-82 307.8 215 76.3
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 7.5e-82 307.8 183 81.4
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 9.8e-82 307.4 208 74.5
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 9.8e-82 307.4 208 74.5
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 2.2e-81 306.2 209 71.8
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 2.9e-81 305.8 172 84.9
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 3.7e-81 305.4 182 79.7
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 4.9e-81 305.1 199 76.4
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 8.3e-81 304.3 180 81.1
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 8.3e-81 304.3 180 82.8
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.4e-80 303.5 200 76.5
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.4e-80 303.5 216 72.7
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.4e-80 303.5 210 70.5
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.9e-80 303.1 185 79.5
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.4e-80 302.8 179 81.0
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 3.2e-80 302.4 210 71.9
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.2e-80 302.4 205 70.2
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 4.1e-80 302.0 182 80.2
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 4.1e-80 302.0 183 79.8
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 7.0e-80 301.2 209 71.3
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 7.0e-80 301.2 214 73.8
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 9.2e-80 300.8 180 78.9
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 9.2e-80 300.8 182 79.7
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.6e-79 300.1 208 74.5
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 2.7e-79 299.3 184 79.9
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 3.5e-79 298.9 178 80.3
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 4.6e-79 298.5 211 75.4
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 2.3e-78 296.2 180 78.3
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 2.3e-78 296.2 180 78.3
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 2.3e-78 296.2 180 81.1
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 2.3e-78 296.2 215 74.9
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 3.9e-78 295.4 180 79.4
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 5.0e-78 295.0 183 78.1
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 6.6e-78 294.7 178 78.7
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 6.6e-78 294.7 200 74.5
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 1.5e-77 293.5 186 78.5
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 1.5e-77 293.5 186 78.5
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 1.5e-77 293.5 182 76.9
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 1.5e-77 293.5 183 77.0
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 1.9e-77 293.1 186 78.5
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.9e-77 293.1 186 78.5
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 1.9e-77 293.1 185 78.4
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 2.5e-77 292.7 182 76.9
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 4.3e-77 292.0 172 82.0
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 9.5e-77 290.8 212 70.8
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.6e-76 290.0 183 78.1
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 2.1e-76 289.7 182 76.4
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.8e-75 286.6 200 69.5
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.3e-75 286.2 213 72.3
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 2.3e-75 286.2 181 77.3
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 5.2e-75 285.0 186 75.8
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.4e-74 282.0 176 77.8
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.4e-74 282.0 176 77.8
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.3e-73 280.4 177 75.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.1e-72 274.6 207 72.0
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 7.1e-72 274.6 212 66.5
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.2e-71 273.9 180 74.4
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 1.2e-71 273.9 179 71.5
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 4.6e-71 271.9 173 78.0
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 1.1e-69 267.3 247 63.6
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 3.3e-69 265.8 173 73.4
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 3.3e-69 265.8 184 70.7
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 7.3e-69 264.6 173 75.1
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 7.3e-69 264.6 173 75.1
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 1.1e-67 260.8 167 79.0
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 1.8e-67 260.0 150 81.3
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.6e-66 256.1 178 70.8
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 1.7e-65 253.4 180 69.4
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 6.4e-65 251.5 181 69.1
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.5e-63 245.7 173 65.9
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.5e-63 245.7 173 65.9
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 2.3e-62 243.0 173 72.3
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 3.9e-62 242.3 170 67.1
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 9.6e-61 237.7 177 63.8
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.4e-59 233.8 138 79.7
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 6.9e-59 231.5 134 85.8
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 2.6e-58 229.6 169 66.3
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.9e-56 223.4 132 81.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 3.3e-53 212.6 175 57.1
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 6.7e-46 188.3 120 75.0
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 7.4e-45 184.9 124 71.8
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.4e-42 176.0 124 71.0
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.3e-38 164.1 105 80.0
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 2.0e-26 123.6 170 40.0
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.0e-25 119.0 76 76.3
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 2.5e-21 106.7 176 35.2
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 3.8e-17 92.8 173 36.4
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 7.7e-10 68.6 50 64.0
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 9.4e-08 61.6 188 29.8
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 1.6e-07 60.8 153 28.1
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 2.7e-07 60.1 152 30.3
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 8.0e-07 58.5 153 28.1


User provided reference genes

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