Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 1.1e-73 280.4 197 100.0
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.9e-55 219.2 197 86.3
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 4.3e-51 205.3 199 84.9
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 1.4e-49 200.3 197 79.7
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 4.5e-48 195.3 196 82.7
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 2.5e-46 189.5 198 77.8
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 3.5e-45 185.7 199 75.4
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 4.5e-40 168.7 199 69.3
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 7.6e-40 167.9 199 69.3
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.8e-33 146.7 170 72.9
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 9.0e-33 144.4 200 67.5
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 9.0e-33 144.4 167 71.9
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.2e-32 144.1 191 68.1
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 2.0e-32 143.3 174 73.0
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 4.5e-32 142.1 200 67.0
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 4.5e-32 142.1 190 72.6
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.7e-31 140.2 191 69.6
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 2.2e-31 139.8 191 69.6
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 2.2e-31 139.8 173 71.1
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.2e-31 139.8 168 73.2
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 2.9e-31 139.4 200 66.5
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 3.8e-31 139.0 157 79.0
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 5.0e-31 138.7 197 68.0
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 1.1e-30 137.5 163 74.2
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.4e-30 137.1 197 64.0
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 4.2e-30 135.6 165 71.5
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 4.2e-30 135.6 167 69.5
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 5.5e-30 135.2 197 67.5
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 2.7e-29 132.9 191 69.6
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 2.7e-29 132.9 164 71.3
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 4.6e-29 132.1 158 74.7
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 7.9e-29 131.3 175 69.7
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 3.0e-28 129.4 161 74.5
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 3.0e-28 129.4 161 73.9
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 3.9e-28 129.0 157 73.2
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 5.1e-28 128.6 164 69.5
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 6.7e-28 128.3 163 71.8
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 1.5e-27 127.1 164 72.6
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 2.5e-27 126.3 162 71.6
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 4.3e-27 125.6 157 75.8
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 4.3e-27 125.6 163 71.8
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 7.4e-27 124.8 196 64.8
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 7.4e-27 124.8 160 75.0
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.7e-26 123.6 163 73.0
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 6.3e-26 121.7 177 67.8
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.1e-25 120.9 164 73.2
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 2.4e-25 119.8 169 65.7
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 4.1e-25 119.0 197 62.4
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 6.9e-25 118.2 143 74.1
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 9.1e-25 117.9 189 64.0
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 1.5e-24 117.1 189 64.0
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 4.5e-24 115.5 163 69.3
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 5.9e-24 115.2 166 66.3
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 2.2e-23 113.2 194 60.8
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 2.9e-23 112.8 160 66.9
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 3.8e-23 112.5 166 66.9
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 5.0e-23 112.1 198 61.6
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 5.0e-23 112.1 190 62.6
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 5.0e-23 112.1 184 64.1
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.9e-22 110.2 165 66.7
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.9e-22 110.2 165 66.7
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 2.5e-22 109.8 194 59.3
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 3.2e-22 109.4 165 66.7
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 3.2e-22 109.4 163 66.3
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 4.2e-22 109.0 165 66.7
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 5.5e-22 108.6 165 66.7
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 7.2e-22 108.2 166 66.3
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 9.4e-22 107.8 167 67.1
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 2.1e-21 106.7 136 77.9
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 7.9e-21 104.8 136 77.2
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.0e-20 104.4 161 65.8
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 1.0e-20 104.4 193 58.5
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.4e-20 104.0 162 63.6
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.8e-20 103.6 166 65.7
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 3.9e-20 102.4 158 67.7
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 6.7e-20 101.7 158 68.4
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 8.8e-20 101.3 162 66.7
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.1e-19 100.9 166 62.7
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 1.1e-19 100.9 143 73.4
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.1e-19 100.9 162 67.3
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.1e-19 100.9 162 64.8
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.0e-19 100.1 126 77.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 3.3e-19 99.4 185 60.5
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.7e-18 97.1 158 66.5
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 2.2e-18 96.7 167 63.5
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 3.7e-18 95.9 133 72.2
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.7e-18 95.9 195 58.5
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 6.3e-18 95.1 166 62.7
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 6.3e-18 95.1 159 66.7
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.1e-17 94.4 121 75.2
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 2.4e-17 93.2 167 62.9
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 5.3e-17 92.0 163 65.0
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 7.0e-17 91.7 154 67.5
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 9.1e-17 91.3 127 78.0
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.2e-16 90.9 188 60.1
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 1.2e-16 90.9 162 63.6
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.0e-16 90.1 127 77.2
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.6e-16 89.7 195 54.4
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 2.9e-15 86.3 160 65.6
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.9e-15 86.3 186 53.8
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 3.8e-15 85.9 64 71.9
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 6.5e-15 85.1 149 65.8
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 6.5e-15 85.1 162 61.7
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.1e-14 84.3 127 66.1
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 4.2e-14 82.4 148 63.5
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 2.3e-12 76.6 64 60.9
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 5.2e-12 75.5 152 37.5
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 3.5e-08 62.8 111 54.1


User provided reference genes

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