Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14230_v3 Cicer arietinum L. HOM05D001327 ORTHO05D025027 6.4e-51 203.8 100 100.0
Ca_14238_v3 Cicer arietinum L. HOM05D001327 ORTHO05D002270 2.8e-38 161.8 80 97.5
Medtr3g013430 Medicago truncatula HOM05D001327 ORTHO05D002270 2.4e-34 148.7 80 86.2
Psat5g223320 Pisum sativum HOM05D001327 ORTHO05D002270 6.0e-33 144.1 80 88.8
TPR.G1434 Trifolium pratense HOM05D001327 ORTHO05D025027 1.5e-31 139.4 83 81.9
Lj3g0008969 Lotus japonicus HOM05D001327 ORTHO05D002270 4.0e-29 131.3 80 78.8
Glyma.04G132000 Glycine max HOM05D001327 ORTHO05D002270 6.9e-29 130.6 81 80.2
Glyma.06G309300 Glycine max HOM05D001327 ORTHO05D002270 3.4e-28 128.3 81 77.8
VMungo1080G0614 Vigna mungo HOM05D001327 ORTHO05D002270 1.2e-25 119.8 76 73.7
Lalb_Chr15g0079171 Lupinus albus HOM05D001327 ORTHO05D002270 2.1e-25 119.0 82 74.4
arahy.Tifrunner.gnm1.ann1.54YKSM Arachis hypogaea HOM05D001327 ORTHO05D002270 1.1e-21 106.7 92 62.0
arahy.Tifrunner.gnm1.ann1.L6T0BS Arachis hypogaea HOM05D001327 ORTHO05D002270 1.1e-21 106.7 92 62.0
Medtr8g041330 Medicago truncatula HOM05D001327 ORTHO05D002270 1.8e-16 89.4 78 56.4
Phvul.005G017000 Phaseolus vulgaris HOM05D001327 ORTHO05D002270 6.7e-16 87.4 47 85.1
LjContig00267g0024726 Lotus japonicus HOM05D001327 ORTHO05D002270 1.5e-15 86.3 78 56.4
Lalb_Chr03g0032621 Lupinus albus HOM05D001327 ORTHO05D002270 1.4e-13 79.7 79 50.6
Glyma.13G189900 Glycine max HOM05D001327 ORTHO05D002270 1.1e-10 70.1 81 45.7
VMungo1127G0317 Vigna mungo HOM05D001327 ORTHO05D002270 1.0e-08 63.5 74 43.2
TPR.G16385 Trifolium pratense HOM05D001327 ORTHO05D002270 1.1e-07 60.1 46 63.0
Dinv32001 Davidia involucrata HOM05D001327 ORTHO05D002270 1.6e-06 56.2 47 53.2
arahy.Tifrunner.gnm1.ann1.W6L6BX Arachis hypogaea HOM05D001327 ORTHO05D002270 2.1e-06 55.8 37 64.9
QL04p021516 Quercus lobata HOM05D001327 ORTHO05D002270 2.1e-06 55.8 48 52.1
TWI60G0781 Tripterygium wilfordii HOM05D001327 ORTHO05D002270 2.1e-06 55.8 39 64.1
arahy.Tifrunner.gnm1.ann1.HVHQ42 Arachis hypogaea HOM05D001327 ORTHO05D002270 2.8e-06 55.5 37 64.9
EL10Ac1g01609 Beta vulgaris HOM05D001327 ORTHO05D002270 2.8e-06 55.5 56 48.2
Cfa010956 Carpinus fangiana HOM05D001327 ORTHO05D002270 2.8e-06 55.5 44 54.5
Potri.002G063700 Populus trichocarpa HOM05D001327 ORTHO05D002270 2.8e-06 55.5 44 56.8
GSVIVG01001426001 Vitis vinifera HOM05D001327 ORTHO05D002270 3.7e-06 55.1 33 69.7
arahy.Tifrunner.gnm1.ann1.3M5TZ5 Arachis hypogaea HOM05D001327 ORTHO05D002270 4.8e-06 54.7 46 54.3
arahy.Tifrunner.gnm1.ann1.WTIT2S Arachis hypogaea HOM05D001327 ORTHO05D002270 4.8e-06 54.7 46 54.3
Glyma.02G078500 Glycine max HOM05D001327 ORTHO05D002270 4.8e-06 54.7 37 64.9
Oeu052708.1 Olea europaea HOM05D001327 ORTHO05D002270 4.8e-06 54.7 47 48.9
Psat4g144040 Pisum sativum HOM05D001327 ORTHO05D002270 4.8e-06 54.7 44 59.1
RcHm_v2.0_Chr6g0274111 Rosa chinensis HOM05D001327 ORTHO05D002270 4.8e-06 54.7 37 64.9
AUR62026631 Chenopodium quinoa HOM05D001327 ORTHO05D002270 6.2e-06 54.3 42 59.5
AUR62034888 Chenopodium quinoa HOM05D001327 ORTHO05D002270 6.2e-06 54.3 42 59.5
DCAR_014738 Daucus carota HOM05D001327 ORTHO05D002270 6.2e-06 54.3 44 59.1
Glyma.20G170300 Glycine max HOM05D001327 ORTHO05D002270 6.2e-06 54.3 43 58.1
Lalb_Chr19g0130011 Lupinus albus HOM05D001327 ORTHO05D002270 6.2e-06 54.3 37 62.2
MD10G1036100 Malus domestica HOM05D001327 ORTHO05D002270 6.2e-06 54.3 37 62.2
FvH4_2g12980 Fragaria vesca HOM05D001327 ORTHO05D002270 8.2e-06 53.9 33 69.7
FAN15G1323 Fragaria x ananassa HOM05D001327 ORTHO05D002270 8.2e-06 53.9 33 69.7
FAN24G2393 Fragaria x ananassa HOM05D001327 ORTHO05D002270 8.2e-06 53.9 33 69.7
FAN27G3364 Fragaria x ananassa HOM05D001327 ORTHO05D002270 8.2e-06 53.9 33 69.7
Glyma.10G221200 Glycine max HOM05D001327 ORTHO05D002270 8.2e-06 53.9 50 52.0


User provided reference genes

Program Settings