Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 3.6e-78 295.0 169 100.0
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 9.4e-47 190.7 170 72.4
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 4.7e-46 188.3 169 71.0
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 3.0e-45 185.7 173 70.5
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 1.6e-41 173.3 123 79.7
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 8.9e-37 157.5 167 67.7
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 1.8e-34 149.8 162 60.5
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 2.4e-34 149.4 161 61.5
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 7.0e-34 147.9 168 63.7
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 9.2e-34 147.5 168 61.9
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 3.3e-31 139.0 167 52.7
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 4.3e-31 138.7 172 54.7
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 7.3e-31 137.9 106 77.4
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 7.3e-31 137.9 167 52.7
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 2.0e-28 129.8 186 47.8
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 2.0e-28 129.8 168 50.6
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 2.6e-28 129.4 170 51.8
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 7.5e-28 127.9 186 47.8
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 1.7e-27 126.7 170 50.0
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 2.2e-27 126.3 167 51.5
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 2.2e-27 126.3 173 48.0
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.7e-27 125.6 168 53.6
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 4.9e-27 125.2 167 56.3
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 6.4e-27 124.8 172 52.3
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 1.1e-26 124.0 168 50.6
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 1.4e-26 123.6 102 66.7
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 1.9e-26 123.2 168 53.6
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.4e-26 122.9 172 52.3
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 3.2e-26 122.5 170 49.4
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 9.2e-26 120.9 172 51.2
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 1.2e-25 120.6 172 51.2
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.6e-25 120.2 167 53.9
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 2.0e-25 119.8 167 55.1
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 2.7e-25 119.4 175 48.0
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 3.5e-25 119.0 172 47.1
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 6.0e-25 118.2 168 50.0
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 7.8e-25 117.9 176 49.4
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 1.0e-24 117.5 110 60.9
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 3.0e-24 115.9 173 50.3
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 3.0e-24 115.9 171 46.2
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 5.0e-24 115.2 171 52.0
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 6.6e-24 114.8 178 45.5
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 6.6e-24 114.8 172 47.1
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 6.6e-24 114.8 107 68.2
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 8.6e-24 114.4 168 45.2
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 1.1e-23 114.0 189 46.0
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 1.1e-23 114.0 112 58.0
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 1.1e-23 114.0 177 46.9
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 1.5e-23 113.6 161 52.2
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.9e-23 113.2 125 56.8
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 1.9e-23 113.2 176 45.5
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 4.3e-23 112.1 168 50.0
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 5.6e-23 111.7 120 58.3
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 5.6e-23 111.7 176 45.5
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 9.5e-23 110.9 183 45.4
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 1.6e-22 110.2 168 48.2
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.6e-22 110.2 168 47.0
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 2.8e-22 109.4 134 53.7
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 2.8e-22 109.4 170 45.9
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 3.6e-22 109.0 181 48.1
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 4.7e-22 108.6 171 45.0
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 4.7e-22 108.6 170 50.0
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 8.0e-22 107.8 167 49.7
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 3.1e-21 105.9 168 45.2
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 6.8e-21 104.8 105 59.0
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 1.2e-20 104.0 168 43.5
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 2.0e-20 103.2 168 46.4
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 4.4e-20 102.1 170 45.3
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 4.4e-20 102.1 170 45.9
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 5.8e-20 101.7 168 46.4
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 1.3e-19 100.5 121 53.7
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 2.2e-19 99.8 166 45.2
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 2.9e-19 99.4 168 43.5
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 2.9e-19 99.4 168 43.5
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 2.9e-19 99.4 178 44.4
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 2.9e-19 99.4 176 42.0
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 3.7e-19 99.0 163 45.4
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 4.9e-19 98.6 168 42.9
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 4.9e-19 98.6 169 45.6
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 6.4e-19 98.2 169 45.6
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 1.1e-18 97.4 168 43.5
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 1.1e-18 97.4 125 53.6
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 1.4e-18 97.1 154 53.2
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.9e-18 96.7 170 43.5
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 4.1e-18 95.5 175 47.4
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 5.4e-18 95.1 168 43.5
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 1.2e-17 94.0 169 45.0
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.2e-17 94.0 152 50.7
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 2.1e-17 93.2 112 51.8
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 3.5e-17 92.4 171 42.7
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 3.5e-17 92.4 149 53.0
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 3.5e-17 92.4 169 47.3
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 1.7e-16 90.1 103 54.4
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 2.3e-16 89.7 107 59.8
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 2.3e-16 89.7 179 38.0
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 6.6e-16 88.2 165 41.8
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 1.5e-15 87.0 99 54.5
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 1.9e-15 86.7 168 41.7
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 5.6e-15 85.1 79 62.0
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 2.1e-14 83.2 152 44.7
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 4.7e-14 82.0 159 43.4
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 1.4e-13 80.5 88 52.3
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 3.1e-13 79.3 143 49.0
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 8.9e-13 77.8 109 46.8
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 9.2e-10 67.8 59 62.7
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 6.0e-09 65.1 166 38.6
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 1.0e-08 64.3 79 54.4
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 1.7e-08 63.5 182 34.6
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 3.9e-08 62.4 95 46.3
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 3.9e-08 62.4 95 46.3
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 1.5e-07 60.5 103 45.6
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 9.5e-07 57.8 172 34.3


User provided reference genes

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