Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 9.6e-303 1042.7 541 100.0
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 6.3e-145 518.5 288 95.1
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 6.6e-126 455.3 242 98.8
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.5e-111 406.4 290 75.9
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 5.6e-109 399.1 317 71.3
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.8e-108 396.7 289 77.2
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 6.0e-103 379.0 297 71.7
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.5e-101 374.4 264 75.4
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.1e-99 368.2 288 70.5
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 5.4e-96 355.9 322 61.5
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-87 327.4 300 63.7
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.7e-86 322.4 253 69.6
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 7.4e-85 318.9 248 67.3
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 5.1e-78 296.2 325 56.6
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 5.1e-78 296.2 325 56.6
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 5.6e-77 292.7 399 50.4
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 2.4e-75 287.3 292 57.9
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 9.0e-75 285.4 289 60.6
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 1.0e-73 282.0 268 62.3
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 2.2e-73 280.8 288 58.0
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 3.2e-72 276.9 292 56.8
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 1.6e-71 274.6 308 55.8
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 7.9e-71 272.3 310 57.1
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 3.9e-70 270.0 300 55.0
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 8.7e-70 268.9 301 56.8
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 1.9e-69 267.7 287 55.4
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 3.3e-69 266.9 252 63.5
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 3.3e-69 266.9 312 56.7
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 1.6e-68 264.6 301 56.5
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 2.8e-68 263.8 296 56.8
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 4.8e-68 263.1 261 61.3
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 8.2e-68 262.3 288 54.5
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 1.4e-67 261.5 252 61.9
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 9.0e-67 258.8 249 61.8
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-66 257.7 273 56.0
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 4.5e-66 256.5 386 45.3
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-64 251.1 272 57.0
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 7.9e-63 245.7 237 60.8
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 7.9e-63 245.7 237 60.8
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 3.0e-62 243.8 282 56.0
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 5.1e-62 243.0 196 68.4
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-61 241.5 235 60.9
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 5.9e-58 229.6 261 55.9
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-56 224.6 192 63.5
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 3.0e-54 217.2 258 53.1
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 8.8e-54 215.7 322 46.0
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 2.8e-52 210.7 151 72.8
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 6.3e-52 209.5 162 69.1
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 4.1e-51 206.8 241 56.4
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 4.8e-44 183.3 288 42.7
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 4.8e-44 183.3 307 43.0
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 3.1e-43 180.6 190 55.3
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.0e-42 177.9 244 47.5
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 2.2e-41 174.5 289 42.9
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 1.9e-40 171.4 307 40.1
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 7.2e-40 169.5 246 50.8
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-39 167.9 269 45.7
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 1.0e-38 165.6 133 66.2
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 3.3e-37 160.6 157 59.2
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 1.7e-36 158.3 174 58.0
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 4.8e-36 156.8 307 39.1
Ca_31309_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.4e-35 155.2 98 85.7
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 2.4e-35 154.5 172 55.2
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 2.2e-33 147.9 307 37.8
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 2.9e-33 147.5 307 37.8
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 1.5e-32 145.2 307 38.1
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 7.2e-32 142.9 96 74.0
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 2.7e-31 141.0 117 65.0
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 6.1e-31 139.8 167 52.7
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 6.1e-31 139.8 114 65.8
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 1.0e-30 139.0 307 36.2
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 2.0e-29 134.8 108 61.1
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 4.4e-29 133.7 111 65.8
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 9.8e-29 132.5 141 58.2
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 8.3e-28 129.4 91 70.3
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.1e-27 129.0 96 71.9
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 9.1e-27 125.9 96 70.8
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 4.5e-26 123.6 97 69.1
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 5.0e-25 120.2 98 65.3
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 8.6e-25 119.4 96 66.7
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 2.5e-24 117.9 96 65.6
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 4.2e-24 117.1 96 67.7
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 4.2e-24 117.1 96 67.7
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 5.5e-24 116.7 88 68.2
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 7.2e-24 116.3 96 64.6
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 9.5e-24 115.9 96 65.6
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 1.2e-23 115.5 100 62.0
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 2.1e-23 114.8 88 63.6
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 2.8e-23 114.4 88 64.8
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 2.8e-23 114.4 96 63.5
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 3.6e-23 114.0 96 65.6
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 4.7e-23 113.6 96 60.4
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 4.7e-23 113.6 96 64.6
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 6.1e-23 113.2 96 61.5
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 8.0e-23 112.8 96 64.6
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 8.0e-23 112.8 96 64.6
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 8.0e-23 112.8 96 64.6
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 8.0e-23 112.8 96 64.6
Medtr3g063320 Medicago truncatula HOM05D000092 ORTHO05D005910 8.0e-23 112.8 81 72.8
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 1.4e-22 112.1 88 64.8
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 1.8e-22 111.7 96 60.4
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 2.3e-22 111.3 96 61.5
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 4.0e-22 110.5 96 61.5
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 5.2e-22 110.2 96 61.5
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 6.8e-22 109.8 96 61.5
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 8.9e-22 109.4 96 61.5
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 8.9e-22 109.4 96 59.4
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 8.9e-22 109.4 96 61.5
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 8.9e-22 109.4 96 61.5
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.2e-21 109.0 143 49.0
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 1.5e-21 108.6 96 60.4
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 2.0e-21 108.2 96 59.4
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 2.0e-21 108.2 96 61.5
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 2.0e-21 108.2 78 66.7
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.6e-21 107.8 89 65.2
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 3.4e-21 107.5 96 60.4
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 3.4e-21 107.5 78 66.7
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 3.4e-21 107.5 96 62.5
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 4.4e-21 107.1 96 60.4
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 4.4e-21 107.1 88 63.6
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 5.7e-21 106.7 96 59.4
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 7.5e-21 106.3 96 58.3
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 7.5e-21 106.3 111 55.0
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 9.8e-21 105.9 78 66.7
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 9.8e-21 105.9 78 64.1
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 9.8e-21 105.9 96 61.5
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 9.8e-21 105.9 96 60.4
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 9.8e-21 105.9 96 59.4
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.3e-20 105.5 96 61.5
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 1.3e-20 105.5 96 61.5
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 1.7e-20 105.1 96 61.5
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 1.7e-20 105.1 78 69.2
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 2.2e-20 104.8 96 59.4
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 2.2e-20 104.8 96 59.4
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 2.8e-20 104.4 96 57.3
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 2.8e-20 104.4 96 59.4
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 2.8e-20 104.4 96 61.5
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 2.8e-20 104.4 96 59.4
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 3.7e-20 104.0 97 59.8
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 8.3e-20 102.8 96 58.3
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 1.1e-19 102.4 96 58.3
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 1.4e-19 102.1 96 58.3
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 4.1e-19 100.5 78 66.7
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 4.1e-19 100.5 111 54.1
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 4.1e-19 100.5 111 54.1
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 5.4e-19 100.1 96 57.3
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 5.4e-19 100.1 78 62.8
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.2e-18 99.0 101 55.4
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 1.2e-18 99.0 96 57.3
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 1.6e-18 98.6 89 60.7
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 1.6e-18 98.6 79 62.0
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 2.0e-18 98.2 97 53.6
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.0e-18 98.2 96 58.3
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 2.0e-18 98.2 96 57.3
TPR.G22712 Trifolium pratense HOM05D001598 ORTHO05D046738 2.0e-18 98.2 64 78.1
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 3.5e-18 97.4 126 44.4
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 5.9e-18 96.7 78 66.7
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 5.9e-18 96.7 88 56.8
TPR.G10936 Trifolium pratense HOM05D000092 ORTHO05D005910 1.3e-17 95.5 210 36.7
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 1.3e-17 95.5 97 54.6
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 1.7e-17 95.1 96 57.3
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 1.9e-16 91.7 88 53.4
TPR.G11462 Trifolium pratense HOM05D001598 ORTHO05D007192 1.9e-16 91.7 248 33.5
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 2.3e-14 84.7 97 52.6
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 8.9e-14 82.8 79 57.0
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 1.5e-13 82.0 78 52.6
TPR.G20665 Trifolium pratense HOM05D008660 ORTHO05D005910 2.0e-13 81.6 75 62.7
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 2.6e-13 81.3 110 49.1
TPR.G29423 Trifolium pratense HOM05D000092 ORTHO05D005910 3.7e-12 77.4 300 29.7
TPR.G24627 Trifolium pratense HOM05D001598 ORTHO05D007192 4.9e-12 77.0 42 88.1
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 8.3e-12 76.3 88 48.9
arahy.Tifrunner.gnm1.ann1.79SUWC Arachis hypogaea HOM05D000092 ORTHO05D011874 9.2e-11 72.8 185 27.6
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 6.0e-10 70.1 120 40.0
Medtr1142s0010 Medicago truncatula HOM05D008660 ORTHO05D013095 1.0e-09 69.3 73 57.5
arahy.Tifrunner.gnm1.ann1.CULB88 Arachis hypogaea HOM05D008660 ORTHO05D005910 1.7e-09 68.6 362 25.1
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.7e-09 68.6 61 62.3
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.7e-09 68.6 61 62.3
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.7e-09 68.6 61 62.3
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 3.9e-09 67.4 53 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 5.0e-09 67.0 112 39.3
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 1.5e-08 65.5 30 96.7
TPR.G8117 Trifolium pratense HOM05D027040 ORTHO05D036751 9.5e-08 62.8 156 23.7
TPR.G40329 Trifolium pratense HOM05D000092 ORTHO05D000042 1.8e-06 58.5 70 54.3
Ca_06450_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 2.3e-06 58.2 189 23.3
Medtr3g466530 Medicago truncatula HOM05D008660 ORTHO05D013095 3.1e-06 57.8 167 37.1
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 3.1e-06 57.8 53 62.3


User provided reference genes

Program Settings