Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.4e-175 618.2 318 100.0
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 7.6e-114 414.5 302 73.8
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.1e-112 410.6 290 75.9
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.8e-91 340.1 242 74.8
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 5.3e-91 338.6 306 61.8
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 8.7e-86 321.2 285 62.5
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 5.6e-85 318.5 267 64.4
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 7.4e-85 318.2 297 62.3
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 5.3e-83 312.0 302 60.3
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 5.8e-82 308.5 322 55.6
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 9.3e-80 301.2 318 55.7
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 9.7e-77 291.2 246 63.4
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 2.6e-74 283.1 309 56.0
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 2.6e-74 283.1 309 56.0
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.2e-72 276.2 277 58.5
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 3.2e-72 276.2 278 57.9
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 2.2e-68 263.5 248 58.1
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 8.2e-68 261.5 282 53.2
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 2.4e-67 260.0 289 54.0
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 1.2e-66 257.7 281 55.2
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 3.8e-65 252.7 287 51.2
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 4.2e-64 249.2 286 53.8
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 7.2e-64 248.4 337 48.4
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 7.9e-63 245.0 244 57.8
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 1.8e-62 243.8 250 56.4
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 1.8e-62 243.8 308 50.6
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 3.0e-62 243.0 261 55.2
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 3.9e-62 242.7 224 60.7
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 2.6e-61 240.0 258 54.7
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 1.7e-60 237.3 301 49.8
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-59 234.6 260 54.2
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 4.1e-59 232.6 224 58.0
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 4.1e-59 232.6 289 49.8
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 1.5e-58 230.7 310 49.0
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 2.6e-58 229.9 221 57.9
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 1.3e-57 227.6 289 51.6
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 3.2e-56 223.0 217 56.2
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 3.2e-56 223.0 217 56.2
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 5.5e-56 222.2 253 53.0
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 9.4e-56 221.5 270 50.7
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.6e-55 220.7 236 53.4
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.1e-55 220.3 203 59.1
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 8.2e-52 208.4 258 47.7
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 2.6e-50 203.4 189 59.3
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 3.2e-48 196.4 161 64.6
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 2.1e-47 193.7 190 55.8
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 1.4e-46 191.0 351 39.3
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 5.2e-46 189.1 233 49.8
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 1.5e-45 187.6 248 49.6
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 1.4e-38 164.5 157 59.9
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 6.3e-36 155.6 172 53.5
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-35 154.8 133 61.7
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-35 152.1 167 54.5
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 2.7e-34 150.2 236 44.5
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 2.9e-33 146.7 266 41.7
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 8.0e-31 138.7 184 50.0
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 8.0e-31 138.7 96 69.8
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 2.3e-30 137.1 114 62.3
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 1.2e-29 134.8 111 64.0
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 1.5e-29 134.4 117 60.7
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 2.6e-29 133.7 182 49.5
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 5.7e-29 132.5 108 59.3
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 8.6e-25 118.6 93 63.4
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 7.3e-24 115.5 121 52.9
Medtr3g063320 Medicago truncatula HOM05D000092 ORTHO05D005910 6.8e-22 109.0 81 69.1
Ca_31309_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.2e-20 104.0 78 73.1
Ca_14168_v3 Cicer arietinum L. HOM05D000092 ORTHO05D148953 3.7e-20 103.2 54 96.3
TPR.G10936 Trifolium pratense HOM05D000092 ORTHO05D005910 2.3e-17 94.0 124 47.6
arahy.Tifrunner.gnm1.ann1.CULB88 Arachis hypogaea HOM05D008660 ORTHO05D005910 3.4e-13 80.1 183 31.1
arahy.Tifrunner.gnm1.ann1.79SUWC Arachis hypogaea HOM05D000092 ORTHO05D011874 2.2e-12 77.4 183 30.1
TPR.G20665 Trifolium pratense HOM05D008660 ORTHO05D005910 2.2e-12 77.4 75 57.3
TPR.G29423 Trifolium pratense HOM05D000092 ORTHO05D005910 8.3e-12 75.5 264 29.2
TPR.G8117 Trifolium pratense HOM05D027040 ORTHO05D036751 3.0e-09 67.0 190 24.7
Medtr1g027630 Medicago truncatula HOM05D000092 ORTHO05D265152 3.6e-07 60.1 113 38.9
Medtr1g094040 Medicago truncatula HOM05D000092 ORTHO05D005910 8.9e-06 55.5 93 32.3


User provided reference genes

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