Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 0.0e+00 1617.4 818 100.0
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 0.0e+00 1325.8 833 83.3
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 0.0e+00 1300.4 824 81.4
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 0.0e+00 1290.0 822 81.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 0.0e+00 1246.9 828 77.7
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 0.0e+00 1163.3 813 73.2
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 0.0e+00 1116.7 813 69.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 0.0e+00 1115.1 827 69.0
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.7e-298 1029.2 815 66.9
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.9e-287 991.5 814 65.2
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 3.3e-286 988.4 818 65.3
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 7.8e-272 940.6 833 59.4
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 8.6e-271 937.2 813 58.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 7.3e-270 934.1 832 59.7
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 2.8e-269 932.2 817 58.9
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 4.0e-268 928.3 832 58.4
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.0e-267 926.0 831 59.0
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 5.8e-267 924.5 815 58.9
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.3e-266 923.3 815 58.8
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 9.2e-265 917.1 831 57.9
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 9.6e-262 907.1 832 57.5
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 6.9e-260 901.0 831 56.3
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 4.4e-259 898.3 833 57.0
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.2e-256 890.2 796 56.9
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.6e-256 889.8 823 56.3
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.1e-256 889.4 832 56.6
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.7e-255 886.3 818 56.4
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 5.1e-255 884.8 817 55.7
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 2.8e-253 879.0 823 56.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 4.8e-253 878.2 830 57.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 2.4e-252 875.9 810 55.1
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 6.9e-252 874.4 812 54.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 9.9e-251 870.5 824 57.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 6.4e-250 867.8 825 55.5
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 8.4e-250 867.5 818 55.5
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.0e-247 860.5 814 55.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 9.6e-246 854.0 816 55.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 8.1e-245 850.9 814 55.3
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.3e-242 843.6 826 53.1
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.9e-242 842.4 809 55.4
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.9e-242 841.6 826 53.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 8.4e-242 840.9 831 54.5
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 2.7e-240 835.9 795 54.5
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 7.9e-240 834.3 822 53.8
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 2.3e-239 832.8 833 53.4
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 3.0e-239 832.4 817 54.1
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 3.9e-239 832.0 833 53.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 3.9e-239 832.0 833 53.3
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 2.5e-238 829.3 811 53.6
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 7.4e-238 827.8 811 53.5
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 3.1e-236 822.4 802 54.2
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 3.4e-235 818.9 803 54.4
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 1.3e-234 817.0 809 53.2
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 4.6e-232 808.5 807 53.2
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 6.7e-231 804.7 805 52.4
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.1e-230 803.9 835 51.9
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 4.3e-230 802.0 809 51.8
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.4e-228 797.0 827 51.9
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.9e-227 791.6 815 53.0
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.4e-225 786.9 795 52.3
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.9e-225 786.6 827 51.6
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.5e-225 786.2 758 53.0
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 4.6e-224 781.9 834 50.2
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.5e-222 776.9 833 50.4
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.5e-219 766.9 822 51.2
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 2.0e-219 766.5 824 49.8
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.3e-215 753.1 522 75.3
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 6.3e-213 745.0 829 49.3
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.3e-213 745.0 819 50.5
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.2e-211 740.7 770 51.0
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.0e-210 737.6 745 51.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.4e-209 733.8 797 50.3
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.4e-209 733.8 827 49.5
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 4.2e-209 732.3 818 50.0
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 2.1e-208 729.9 796 50.6
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 2.1e-208 729.9 790 51.4
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 4.7e-208 728.8 788 50.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 4.7e-208 728.8 788 50.9
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 6.1e-208 728.4 805 49.6
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 3.9e-207 725.7 790 51.5
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 3.9e-207 725.7 814 49.6
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 9.7e-206 721.1 819 49.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 4.8e-205 718.8 818 48.5
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 7.7e-203 711.4 742 51.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.5e-201 706.4 746 51.1
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.1e-196 691.0 790 49.5
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 4.5e-195 685.6 813 46.2
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.7e-187 659.8 656 54.0
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.3e-186 656.8 795 46.5
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.9e-186 656.4 610 56.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 2.2e-181 640.2 616 55.5
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.4e-180 636.7 821 42.8
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.4e-165 585.5 759 46.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 3.5e-163 579.7 807 42.3
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 9.9e-158 561.6 795 40.1
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 4.1e-156 556.2 559 54.2
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 6.4e-149 532.3 610 48.7
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 5.8e-142 509.2 423 61.2
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.4e-140 504.6 564 47.3
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.9e-135 485.7 487 53.8
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 4.6e-131 473.0 785 37.5
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 7.6e-118 429.1 771 39.8
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.1e-107 394.4 327 62.1
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.5e-92 343.2 284 60.2
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.3e-90 337.8 914 29.1
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.8e-88 330.9 876 28.3
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 8.8e-82 309.3 260 60.0
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.3e-79 300.1 497 41.4
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.9e-76 291.6 279 55.2
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 7.2e-76 289.7 224 66.1
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.6e-62 245.4 200 60.0
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 3.3e-60 237.7 260 47.7
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 9.5e-60 236.1 847 27.9
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.8e-58 231.9 383 37.1
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 2.8e-51 208.0 543 27.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.2e-48 198.4 604 29.0
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.5e-44 185.7 224 48.2
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.3e-19 102.8 160 41.2
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.8e-16 91.3 71 59.2
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 1.0e-13 83.2 308 24.7


User provided reference genes

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