Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14101_v3 Cicer arietinum L. HOM05D000641 ORTHO05D009503 1.7e-120 436.0 229 100.0
TPR.G12185 Trifolium pratense HOM05D000641 ORTHO05D009503 4.1e-77 292.0 305 58.4
Medtr3g408360 Medicago truncatula HOM05D000641 ORTHO05D009503 1.8e-72 276.6 192 79.2
Psat5g228240 Pisum sativum HOM05D000641 ORTHO05D009503 2.3e-72 276.2 206 75.2
Glyma.06G318000 Glycine max HOM05D000641 ORTHO05D009503 3.8e-51 205.7 332 43.1
Lj3g0012958 Lotus japonicus HOM05D000641 ORTHO05D009503 2.2e-46 189.9 212 58.5
Glyma.04G120400 Glycine max HOM05D000641 ORTHO05D009503 5.4e-45 185.3 226 54.4
Phvul.005G008600 Phaseolus vulgaris HOM05D000641 ORTHO05D009503 5.4e-45 185.3 228 53.1
VMungo1080G1510 Vigna mungo HOM05D000641 ORTHO05D009503 9.2e-45 184.5 232 53.9
Lalb_Chr18g0048911 Lupinus albus HOM05D000641 ORTHO05D009503 6.6e-43 178.3 203 56.7
arahy.Tifrunner.gnm1.ann1.TAG6ZD Arachis hypogaea HOM05D000641 ORTHO05D009503 1.1e-24 117.9 225 44.0
arahy.Tifrunner.gnm1.ann1.S24B42 Arachis hypogaea HOM05D000641 ORTHO05D009503 4.0e-24 115.9 195 47.2
Haze_13894 Corylus avellana HOM05D000641 ORTHO05D009503 4.9e-22 109.0 192 42.2
Thecc.03G153400 Theobroma cacao HOM05D000641 ORTHO05D009503 8.3e-22 108.2 203 40.9
arahy.Tifrunner.gnm1.ann1.W6IUV8 Arachis hypogaea HOM05D000641 ORTHO05D009503 3.2e-21 106.3 96 60.4
Cfa008148 Carpinus fangiana HOM05D000641 ORTHO05D009503 5.4e-21 105.5 193 41.5
Duzib068G1481 Durio zibethinus HOM05D000641 ORTHO05D009503 4.6e-20 102.4 204 38.2
Dinv06573 Davidia involucrata HOM05D000641 ORTHO05D009503 6.0e-20 102.1 189 40.7
arahy.Tifrunner.gnm1.ann1.20MRK9 Arachis hypogaea HOM05D000641 ORTHO05D009503 1.3e-19 100.9 129 47.3
Manes.06G133400 Manihot esculenta HOM05D000641 ORTHO05D009503 3.0e-19 99.8 196 40.3
TAR375G0077 Trochodendron aralioides HOM05D000641 ORTHO05D009503 3.0e-19 99.8 212 36.8
Lj8A43T54 Lonicera japonica HOM05D000641 ORTHO05D009503 6.6e-19 98.6 195 41.0
TWI39G0625 Tripterygium wilfordii HOM05D000641 ORTHO05D009503 6.6e-19 98.6 188 38.3
QL09p005284 Quercus lobata HOM05D000641 ORTHO05D009503 5.6e-18 95.5 156 41.0
arahy.Tifrunner.gnm1.ann1.YH4NKV Arachis hypogaea HOM05D000641 ORTHO05D009503 9.6e-18 94.7 137 44.5
Cpa.g.sc13.292 Carica papaya HOM05D000641 ORTHO05D009503 2.8e-17 93.2 216 33.3
Nitab4.5_0003647g0030 Nicotiana tabacum HOM05D000641 ORTHO05D009503 2.8e-17 93.2 191 39.8
COL.COLO4_14100 Corchorus olitorius HOM05D000641 ORTHO05D009503 1.1e-16 91.3 215 35.8
ECA232G0602 Erigeron canadensis HOM05D000641 ORTHO05D009503 2.0e-15 87.0 99 49.5
Atru.chr1.747 Acer truncatum HOM05D000641 ORTHO05D009503 2.6e-15 86.7 209 34.0
Peaxi162Scf00167g00069 Petunia axillaris HOM05D000641 ORTHO05D009503 3.4e-15 86.3 194 39.2
Migut.F00487 Erythranthe guttata HOM05D000641 ORTHO05D009503 4.4e-15 85.9 201 36.8
Gohir.A07G042000 Gossypium hirsutum HOM05D000641 ORTHO05D009503 7.6e-15 85.1 187 34.8
ClCG09G013070 Citrullus lanatus HOM05D000641 ORTHO05D009503 9.9e-15 84.7 189 40.2
MD07G1252100 Malus domestica HOM05D000641 ORTHO05D009503 1.3e-14 84.3 201 36.8
Sabra01G0097000 Salix brachista HOM05D000641 ORTHO05D009503 2.2e-14 83.6 159 40.3
Potri.001G126000 Populus trichocarpa HOM05D000641 ORTHO05D009503 4.9e-14 82.4 211 37.0
CsaV3_3G050080 Cucumis sativus L. HOM05D000641 ORTHO05D009503 6.4e-14 82.0 187 38.5
Gorai.001G049400 Gossypium raimondii HOM05D000641 ORTHO05D009503 6.4e-14 82.0 187 34.2
Ciclev10006535m.g Citrus clementina HOM05D000641 ORTHO05D009503 8.4e-14 81.6 97 49.5
Prupe.2G275600 Prunus persica HOM05D000641 ORTHO05D009503 1.9e-13 80.5 206 36.9
Oeu021704.1 Olea europaea HOM05D000641 ORTHO05D009503 3.2e-13 79.7 230 32.6
Sopen05g030110 Solanum pennellii HOM05D000641 ORTHO05D009503 3.2e-13 79.7 201 34.8
CiPaw.04G013400 Carya illinoinensis HOM05D000641 ORTHO05D009503 5.4e-13 79.0 220 35.0
PGSC0003DMG400007216 Solanum tuberosum HOM05D000641 ORTHO05D009503 5.4e-13 79.0 211 33.2
EL10Ac3g05858 Beta vulgaris HOM05D000641 ORTHO05D009503 9.3e-13 78.2 248 32.7
C01p20610 Brassica napus HOM05D000641 ORTHO05D009503 9.3e-13 78.2 108 46.3
Gohir.D07G046200 Gossypium hirsutum HOM05D000641 ORTHO05D009503 9.3e-13 78.2 161 34.8
AUR62002222 Chenopodium quinoa HOM05D003096 ORTHO05D003521 1.2e-12 77.8 112 43.8
Eucgr.K00166 Eucalyptus grandis HOM05D000641 ORTHO05D009503 2.1e-12 77.0 199 39.2
MELO3C003310.2 Cucumis melo HOM05D000641 ORTHO05D009503 2.7e-12 76.6 182 37.4
Sp7g23210 Schrenkiella parvula HOM05D000641 ORTHO05D009503 2.7e-12 76.6 120 42.5
HanXRQChr16g0512821 Helianthus annuus HOM05D000641 ORTHO05D009503 4.6e-12 75.9 219 34.2
BolC1t01992H Brassica oleracea HOM05D000641 ORTHO05D009503 7.8e-12 75.1 107 44.9
THA.LOC104811527 Tarenaya hassleriana HOM05D000641 ORTHO05D009503 7.8e-12 75.1 104 42.3
AUR62015434 Chenopodium quinoa HOM05D000641 ORTHO05D009503 1.3e-11 74.3 236 33.1
FvH4_7g27280 Fragaria vesca HOM05D000641 ORTHO05D009503 1.3e-11 74.3 198 35.4
SGA_v2.0_scaffold2G01221 Striga asiatica HOM05D000641 ORTHO05D009503 1.3e-11 74.3 182 35.2
FAN06G1376 Fragaria x ananassa HOM05D000641 ORTHO05D009503 1.7e-11 73.9 206 34.0
Aa31LG7G10390 Aethionema arabicum HOM05D000641 ORTHO05D009503 2.3e-11 73.6 95 46.3
Actinidia24993 Actinidia chinensis HOM05D000641 ORTHO05D009503 3.0e-11 73.2 95 48.4
CARHR232590 Cardamine hirsuta HOM05D000641 ORTHO05D009503 5.1e-11 72.4 141 37.6
FAN10G0113 Fragaria x ananassa HOM05D000641 ORTHO05D009503 5.1e-11 72.4 198 34.8
BcaC06g32833 Brassica carinata HOM05D000641 ORTHO05D009503 8.7e-11 71.6 118 41.5
FAN03G1792 Fragaria x ananassa HOM05D000641 ORTHO05D009503 1.1e-10 71.2 198 36.4
Sed0005950 Sechium edule HOM05D000641 ORTHO05D009503 1.1e-10 71.2 176 36.4
Lsat_1_v5_gn_9_51881 Lactuca sativa HOM05D000641 ORTHO05D009503 1.5e-10 70.9 216 32.9
CAN.G937.2 Capsicum annuum HOM05D000641 ORTHO05D009503 1.9e-10 70.5 194 32.5
Thhalv10025380m.g Eutrema salsugineum HOM05D000641 ORTHO05D009503 1.9e-10 70.5 153 36.6
FAN01G2651 Fragaria x ananassa HOM05D000641 ORTHO05D009503 1.9e-10 70.5 235 31.9
FAN06G5028 Fragaria x ananassa HOM05D000641 ORTHO05D009503 1.9e-10 70.5 206 33.5
CANSAT56G4329 Cannabis sativa HOM05D000641 ORTHO05D009503 2.5e-10 70.1 94 46.8
Cc02_g04410 Coffea canephora HOM05D000641 ORTHO05D009503 4.3e-10 69.3 161 37.3
AL7G27960 Arabidopsis lyrata HOM05D000641 ORTHO05D009503 1.3e-09 67.8 165 35.2
RcHm_v2.0_Chr1g0374111 Rosa chinensis HOM05D000641 ORTHO05D009503 1.3e-09 67.8 125 40.0
Eucgr.K00991 Eucalyptus grandis HOM05D000641 ORTHO05D009503 1.6e-09 67.4 103 46.6
Carub.0007s1584 Capsella rubella HOM05D000641 ORTHO05D009503 2.8e-09 66.6 175 33.1
AT4G25190 Arabidopsis thaliana HOM05D000641 ORTHO05D009503 3.6e-09 66.2 171 35.1
C07p54090 Brassica napus HOM05D000641 ORTHO05D009503 3.6e-09 66.2 167 36.5
CANSAT56G1736 Cannabis sativa HOM05D000641 ORTHO05D009503 3.6e-09 66.2 196 33.2
BolC7t45895H Brassica oleracea HOM05D000641 ORTHO05D009503 4.8e-09 65.9 165 37.6
A03p55810 Brassica napus HOM05D000641 ORTHO05D009503 6.2e-09 65.5 153 36.6
BraA03t14649Z Brassica rapa HOM05D000641 ORTHO05D009503 6.2e-09 65.5 153 36.6
MD01G1181900 Malus domestica HOM05D000641 ORTHO05D009503 1.1e-08 64.7 213 31.5
PSO541G2384 Papaver somniferum HOM05D000641 ORTHO05D008820 2.4e-08 63.5 225 29.8
PSO675G1637 Papaver somniferum HOM05D000641 ORTHO05D008820 3.1e-08 63.2 225 29.3
Eucgr.A00872 Eucalyptus grandis HOM05D000641 ORTHO05D009503 4.0e-08 62.8 171 38.6
Sc19g0002090 Simmondsia chinensis HOM05D000641 ORTHO05D009503 4.0e-08 62.8 93 40.9
BcaC09g50799 Brassica carinata HOM05D001514 ORTHO05D002956 6.9e-08 62.0 58 55.2
PGR142G1585 Punica granatum HOM05D000641 ORTHO05D009503 6.9e-08 62.0 206 31.6
DCAR_018115 Daucus carota HOM05D000641 ORTHO05D009503 1.2e-07 61.2 213 31.0
PSO561G0075 Papaver somniferum HOM05D000641 ORTHO05D009503 1.5e-07 60.8 150 34.0
PSO063G1769 Papaver somniferum HOM05D000641 ORTHO05D009503 4.4e-07 59.3 151 35.1
Lj3g0004709 Lotus japonicus HOM05D000641 ORTHO05D008820 2.9e-06 56.6 108 37.0
arahy.Tifrunner.gnm1.ann1.BVJ6NA Arachis hypogaea HOM05D000641 ORTHO05D009503 4.9e-06 55.8 258 29.1
CAN.G248.59 Capsicum annuum HOM05D000641 ORTHO05D008820 6.4e-06 55.5 131 33.6


User provided reference genes

Program Settings