Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 0.0e+00 1416.4 722 100.0
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 0.0e+00 1310.0 766 89.4
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 2.3e-267 925.6 1001 55.9
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 5.1e-267 924.5 861 63.3
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 5.1e-259 897.9 910 59.6
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 1.2e-207 727.2 808 57.1
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 3.6e-204 715.7 805 54.0
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 2.1e-196 689.9 833 51.9
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 8.0e-196 688.0 822 51.7
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 4.4e-178 629.0 839 48.5
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 4.9e-169 599.0 799 48.9
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 5.3e-163 578.9 808 47.0
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 1.4e-78 298.5 786 34.0
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 5.4e-75 286.6 850 31.1
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.8e-70 271.6 850 30.6
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 6.0e-66 256.5 188 76.6
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 1.1e-64 252.3 850 30.8
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 1.5e-61 241.9 912 29.8
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 1.3e-60 238.8 819 31.0
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 2.2e-60 238.0 832 28.6
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 2.9e-60 237.7 847 29.0
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.1e-56 225.7 834 29.1
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 7.3e-56 223.0 832 29.6
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 1.4e-54 218.8 828 29.0
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.4e-54 218.8 840 28.3
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 3.1e-54 217.6 828 28.9
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 2.6e-53 214.5 842 29.6
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 9.9e-53 212.6 828 28.6
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 9.9e-53 212.6 833 29.8
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 7.1e-51 206.5 718 29.9
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 3.5e-50 204.1 802 30.7
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 1.0e-49 202.6 737 29.6
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 6.6e-49 199.9 850 27.3
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 8.7e-49 199.5 803 29.6
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 1.5e-48 198.7 840 27.7
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.3e-44 185.7 833 27.4
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 3.8e-44 184.1 846 28.0
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 8.4e-44 183.0 637 31.9
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 1.4e-43 182.2 664 31.3
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 1.0e-41 176.0 838 26.5
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.9e-41 174.1 664 30.6
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 9.6e-40 169.5 702 28.9
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 4.8e-39 167.2 781 27.7
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 2.4e-38 164.9 586 30.9
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 4.0e-38 164.1 889 25.9
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 2.0e-37 161.8 810 27.8
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 1.7e-36 158.7 802 26.4
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 2.9e-36 157.9 758 27.2
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.2e-34 152.5 812 27.2
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.8e-33 148.7 848 25.8
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 2.8e-31 141.4 810 26.2
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 6.9e-30 136.7 663 26.5
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 5.9e-29 133.7 818 25.6
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.0e-28 132.9 859 24.9
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 1.0e-28 132.9 814 25.2
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 2.2e-28 131.7 389 30.6
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 3.8e-28 131.0 725 25.8
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.1e-27 129.4 900 24.7
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 3.5e-26 124.4 887 23.8
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 1.3e-25 122.5 824 24.6
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 1.3e-25 122.5 775 25.7
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 5.1e-25 120.6 735 26.1
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 6.7e-25 120.2 801 25.7
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.8e-22 112.1 740 23.9
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 6.9e-22 110.2 829 25.0
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 9.0e-22 109.8 495 27.3
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 1.1e-19 102.8 237 37.1
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.6e-18 99.0 337 29.7
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 4.6e-18 97.4 626 24.9
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 3.3e-16 91.3 259 34.4
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 4.1e-14 84.3 241 36.5
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 3.8e-12 77.8 187 36.4
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 7.2e-11 73.6 361 26.6
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.6e-10 72.4 603 24.7
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 1.0e-09 69.7 83 51.8
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 1.8e-09 68.9 265 27.9
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 5.1e-09 67.4 636 24.4
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 1.7e-07 62.4 642 24.6
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 6.3e-07 60.5 379 25.6
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 3.1e-06 58.2 164 29.3
SEGI_25891 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 3.1e-06 58.2 115 40.9


User provided reference genes

Program Settings