Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 9.9e-130 466.8 246 100.0
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 1.7e-105 386.3 211 82.5
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 3.1e-91 339.0 205 75.1
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 8.5e-89 330.9 215 72.1
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 5.7e-85 318.2 213 67.1
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 1.4e-83 313.5 211 67.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 8.8e-70 267.7 208 61.1
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 7.5e-69 264.6 214 58.4
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.6e-63 246.9 168 69.6
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.6e-63 245.7 206 59.2
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 4.7e-63 245.4 219 57.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 5.7e-61 238.4 234 52.6
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.5e-56 223.8 209 55.0
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 2.5e-56 223.0 217 52.5
VMungo1383G0643 Vigna mungo HOM05D004124 ORTHO05D004779 1.2e-53 214.2 179 57.0
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 2.6e-53 213.0 176 60.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.4e-51 206.5 211 51.7
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 3.5e-50 202.6 211 51.7
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 7.8e-50 201.4 150 62.0
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.9e-44 183.0 192 47.9
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.6e-42 177.2 225 44.0
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 3.9e-41 172.6 220 45.9
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 3.3e-40 169.5 155 53.5
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.6e-39 167.2 232 42.7
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.9e-35 153.7 177 46.9
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 9.2e-35 151.4 219 40.6
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 8.6e-33 144.8 232 38.4
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 5.6e-32 142.1 252 38.1
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 2.6e-29 133.3 248 35.1
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 4.9e-28 129.0 233 39.1
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 8.4e-28 128.3 199 42.2
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.9e-27 127.1 233 36.9
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 2.4e-27 126.7 233 34.3
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 3.2e-27 126.3 239 36.4
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 1.6e-26 124.0 230 37.8
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 2.1e-26 123.6 236 35.6
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 2.7e-26 123.2 237 35.4
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 3.5e-26 122.9 233 37.3
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 3.5e-26 122.9 235 36.2
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 7.8e-26 121.7 232 33.6
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 7.8e-26 121.7 235 37.0
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 7.8e-26 121.7 233 37.3
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 7.8e-26 121.7 228 36.4
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.0e-25 121.3 230 35.2
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.3e-25 120.9 227 34.4
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.7e-25 120.6 218 39.0
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 1.7e-25 120.6 236 35.6
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.7e-25 120.6 234 34.6
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 1.7e-25 120.6 151 45.0
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.3e-25 120.2 230 34.3
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 2.3e-25 120.2 228 36.4
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 2.3e-25 120.2 229 34.9
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 2.3e-25 120.2 231 36.8
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 2.3e-25 120.2 230 34.3
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 3.0e-25 119.8 219 37.0
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 3.9e-25 119.4 230 34.3
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.9e-25 119.4 230 34.3
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.9e-25 119.4 230 34.3
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.9e-25 119.4 230 34.3
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 3.9e-25 119.4 227 37.4
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 3.9e-25 119.4 236 35.2
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 3.9e-25 119.4 232 37.1
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 3.9e-25 119.4 237 34.2
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 3.9e-25 119.4 235 36.2
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 5.1e-25 119.0 235 35.3
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 5.1e-25 119.0 236 36.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 5.1e-25 119.0 234 35.9
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 8.7e-25 118.2 236 36.4
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 8.7e-25 118.2 236 36.0
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 8.7e-25 118.2 221 34.8
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 8.7e-25 118.2 230 34.8
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 1.1e-24 117.9 242 33.9
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 1.1e-24 117.9 238 33.2
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.5e-24 117.5 232 34.1
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 1.5e-24 117.5 229 37.1
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.9e-24 117.1 235 37.0
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 1.9e-24 117.1 231 34.6
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 2.5e-24 116.7 228 34.2
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.5e-24 116.7 232 37.9
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 2.5e-24 116.7 231 35.9
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 3.3e-24 116.3 230 36.1
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 4.3e-24 115.9 236 34.7
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 4.3e-24 115.9 228 34.2
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 4.3e-24 115.9 241 36.1
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 5.6e-24 115.5 219 36.1
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 5.6e-24 115.5 234 33.3
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 5.6e-24 115.5 219 35.6
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 5.6e-24 115.5 220 35.0
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 7.3e-24 115.2 238 33.2
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 7.3e-24 115.2 231 34.2
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 7.3e-24 115.2 231 34.2
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 9.6e-24 114.8 229 34.9
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 9.6e-24 114.8 229 34.5
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 9.6e-24 114.8 224 35.3
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 1.3e-23 114.4 222 37.4
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.3e-23 114.4 257 35.4
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 1.3e-23 114.4 224 34.8
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 1.6e-23 114.0 220 34.5
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 2.1e-23 113.6 157 41.4
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 2.1e-23 113.6 238 34.0
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.1e-23 113.6 231 34.6
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 2.8e-23 113.2 231 33.3
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 2.8e-23 113.2 233 31.8
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 2.8e-23 113.2 230 34.3
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 2.8e-23 113.2 238 34.0
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 2.8e-23 113.2 220 35.0
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.8e-23 113.2 230 34.3
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 2.8e-23 113.2 237 34.6
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.6e-23 112.8 236 36.9
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 3.6e-23 112.8 217 35.5
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 3.6e-23 112.8 230 33.0
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 4.8e-23 112.5 237 32.9
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 4.8e-23 112.5 226 35.0
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 4.8e-23 112.5 233 33.0
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 4.8e-23 112.5 237 34.2
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 6.2e-23 112.1 215 38.1
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 8.1e-23 111.7 221 33.5
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.1e-22 111.3 231 33.8
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.4e-22 110.9 235 37.9
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 1.4e-22 110.9 234 33.8
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 1.8e-22 110.5 235 33.2
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 1.8e-22 110.5 235 32.8
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 2.4e-22 110.2 233 34.3
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 3.1e-22 109.8 233 33.0
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 3.1e-22 109.8 199 35.2
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 3.1e-22 109.8 228 35.1
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 3.1e-22 109.8 228 33.8
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.1e-22 109.8 225 32.9
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 5.3e-22 109.0 236 33.1
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 6.9e-22 108.6 248 31.9
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 6.9e-22 108.6 212 34.9
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 6.9e-22 108.6 195 36.9
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 9.0e-22 108.2 237 34.2
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 9.0e-22 108.2 233 32.2
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 1.2e-21 107.8 212 34.9
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 1.5e-21 107.5 226 35.8
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.0e-21 107.1 232 31.9
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 2.6e-21 106.7 208 35.1
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 3.4e-21 106.3 241 32.4
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 4.5e-21 105.9 228 35.1
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 4.5e-21 105.9 235 33.2
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 4.5e-21 105.9 243 32.9
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.7e-20 104.0 233 33.0
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 2.2e-20 103.6 143 40.6
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 2.9e-20 103.2 218 34.4
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 3.8e-20 102.8 234 31.6
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 3.8e-20 102.8 225 32.9
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 4.9e-20 102.4 233 31.8
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 6.4e-20 102.1 231 34.2
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 6.4e-20 102.1 225 32.4
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 8.4e-20 101.7 241 31.1
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 1.4e-19 100.9 225 34.7
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 2.4e-19 100.1 233 33.0
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 3.2e-19 99.8 211 32.7
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 4.2e-19 99.4 241 32.4
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 7.1e-19 98.6 216 33.8
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 1.6e-18 97.4 215 36.7
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 6.0e-18 95.5 58 74.1
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 1.4e-14 84.3 278 28.8
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 6.4e-12 75.5 176 36.9
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 1.9e-11 73.9 154 37.7
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 1.0e-09 68.2 142 31.7
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 5.1e-09 65.9 174 29.3
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 1.9e-08 63.9 163 31.9
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.9e-08 63.9 38 68.4
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 3.3e-08 63.2 160 31.9
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 7.4e-08 62.0 147 29.3
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 9.6e-08 61.6 132 31.1
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 3.7e-07 59.7 151 29.8
Lj6A827G49 Lonicera japonica HOM05D022640 ORTHO05D028383 6.2e-07 58.9 53 41.5
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 8.1e-07 58.5 46 54.3
Medtr8g075970 Medicago truncatula HOM05D006394 ORTHO05D008057 5.3e-06 55.8 204 27.9
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 6.9e-06 55.5 158 33.5


User provided reference genes

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