Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.6e-86 322.8 168 100.0
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.1e-74 283.5 168 84.5
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 4.9e-72 274.6 166 81.3
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 2.5e-71 272.3 167 83.8
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.4e-63 246.5 165 77.0
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 6.1e-54 214.5 165 65.5
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 3.0e-53 212.2 117 93.2
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 6.7e-53 211.1 117 92.3
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 9.1e-50 200.7 167 61.7
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.4e-47 193.4 167 59.9
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 1.9e-47 193.0 160 61.2
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 6.1e-46 188.0 155 60.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 7.9e-46 187.6 160 60.0
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.4e-45 186.8 160 60.0
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 2.6e-44 182.6 166 58.4
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 3.3e-44 182.2 160 60.0
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 5.7e-44 181.4 160 59.4
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 1.3e-43 180.3 160 57.5
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 1.3e-43 180.3 164 55.5
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 2.8e-43 179.1 165 53.9
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 3.7e-43 178.7 165 53.9
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 3.7e-43 178.7 161 57.8
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 4.8e-43 178.3 159 57.2
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 4.8e-43 178.3 166 53.0
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.8e-43 178.3 166 54.2
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 8.2e-43 177.6 161 58.4
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 8.2e-43 177.6 140 62.9
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 1.4e-42 176.8 160 56.9
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 1.8e-42 176.4 159 56.6
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 2.0e-41 172.9 144 56.9
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.0e-41 172.9 164 52.4
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 3.5e-41 172.2 143 55.2
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 5.9e-41 171.4 159 54.7
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.0e-40 170.6 160 54.4
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 1.0e-40 170.6 144 57.6
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 1.3e-40 170.2 159 52.8
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 1.7e-40 169.9 144 59.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 5.0e-40 168.3 132 62.1
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.1e-39 167.2 159 54.1
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.1e-39 167.2 161 54.0
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 1.9e-39 166.4 159 54.1
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 4.2e-39 165.2 160 51.9
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 7.2e-39 164.5 163 50.9
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 9.4e-39 164.1 157 54.8
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.2e-38 163.7 175 49.7
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.6e-38 163.3 167 49.7
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 1.6e-38 163.3 157 53.5
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 3.6e-38 162.2 157 54.1
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 6.1e-38 161.4 159 53.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.0e-37 160.6 144 54.2
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 2.3e-37 159.5 154 53.9
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 2.3e-37 159.5 157 52.2
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 2.3e-37 159.5 143 51.0
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 4.0e-37 158.7 160 50.0
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 4.0e-37 158.7 157 52.9
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 5.2e-37 158.3 166 47.6
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 8.8e-37 157.5 140 52.9
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 2.0e-36 156.4 157 51.6
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 2.0e-36 156.4 160 48.8
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 3.3e-36 155.6 162 51.9
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 5.7e-36 154.8 159 49.7
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.3e-35 153.7 149 46.3
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 2.2e-35 152.9 169 49.1
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 2.2e-35 152.9 169 49.1
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 2.2e-35 152.9 166 50.0
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 3.7e-35 152.1 167 47.9
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-34 150.2 166 48.2
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 3.1e-34 149.1 141 52.5
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 7.0e-34 147.9 149 46.3
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.6e-33 146.7 155 51.0
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.0e-33 146.4 149 45.6
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 4.5e-33 145.2 145 46.9
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 7.7e-33 144.4 137 52.6
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 1.3e-32 143.7 178 47.2
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 3.8e-32 142.1 167 46.7
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 1.9e-31 139.8 155 50.3
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 1.9e-31 139.8 164 42.7
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 3.2e-31 139.0 150 46.0
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 9.4e-31 137.5 154 47.4
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.1e-30 136.3 149 42.3
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 3.6e-30 135.6 148 46.6
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 6.1e-30 134.8 150 44.0
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 8.0e-30 134.4 159 45.3
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 2.3e-29 132.9 148 41.9
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.2e-28 130.6 114 57.9
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 2.0e-28 129.8 149 48.3
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 2.0e-28 129.8 149 48.3
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 7.5e-28 127.9 160 40.0
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 2.2e-27 126.3 101 60.4
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 3.1e-26 122.5 137 50.4
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 1.2e-25 120.6 158 45.6
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 2.7e-25 119.4 168 37.5
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 3.5e-25 119.0 144 42.4
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 3.8e-24 115.5 122 48.4
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 1.1e-23 114.0 119 47.1
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 1.9e-23 113.2 158 41.8
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.3e-21 106.3 140 41.4
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 2.0e-20 103.2 92 56.5
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 2.6e-20 102.8 108 45.4
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.7e-19 100.1 125 36.8
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 1.8e-18 96.7 165 37.6
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 7.0e-18 94.7 160 39.4
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 1.6e-17 93.6 98 50.0
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 3.5e-17 92.4 70 64.3
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.3e-16 89.7 172 33.1
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 3.8e-16 89.0 96 49.0
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 5.0e-16 88.6 90 52.2
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 1.9e-15 86.7 79 51.9
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.5e-15 86.3 144 29.9
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 3.3e-15 85.9 108 35.2
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 9.5e-15 84.3 77 49.4
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 1.2e-14 84.0 135 32.6
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 1.2e-14 84.0 159 30.8
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 1.2e-14 84.0 164 32.3
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 6.1e-14 81.6 112 43.8
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 8.0e-14 81.3 134 39.6
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 4.0e-13 79.0 107 44.9
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 1.5e-12 77.0 126 36.5
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 1.7e-11 73.6 70 50.0
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 2.2e-11 73.2 153 32.7
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 2.7e-09 66.2 77 39.0
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.9e-07 60.1 71 46.5
Medtr8g021220 Medicago truncatula HOM05D002637 ORTHO05D009046 3.3e-07 59.3 42 66.7
SEGI_22185 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 8.0e-06 54.7 127 27.6
SEGI_22584 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 8.0e-06 54.7 127 27.6
SEGI_29719 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 8.0e-06 54.7 127 27.6


User provided reference genes

Program Settings