Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 1.4e-45 186.0 101 100.0
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 5.1e-32 141.0 103 80.6
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 9.7e-31 136.7 101 79.2
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 5.3e-29 131.0 98 74.5
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 6.5e-27 124.0 107 72.0
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 2.5e-26 122.1 94 75.5
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 2.3e-24 115.5 100 66.0
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 2.3e-24 115.5 107 69.2
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 5.3e-21 104.4 101 66.3
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 6.9e-21 104.0 100 65.0
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 1.2e-20 103.2 96 66.7
arahy.Tifrunner.gnm1.ann1.F37JRW Arachis hypogaea HOM05D007293 ORTHO05D009143 4.7e-17 91.3 99 64.6
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 1.0e-16 90.1 103 55.3
arahy.Tifrunner.gnm1.ann1.HDCN36 Arachis hypogaea HOM05D007293 ORTHO05D009143 8.8e-16 87.0 99 63.6
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 1.1e-15 86.7 103 54.4
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 1.1e-15 86.7 103 56.3
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 2.0e-15 85.9 100 54.0
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 2.6e-15 85.5 98 55.1
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.3e-14 83.2 103 54.4
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 3.7e-14 81.6 99 54.5
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 4.8e-14 81.3 103 53.4
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 1.1e-13 80.1 102 53.9
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 1.4e-13 79.7 104 53.8
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 1.4e-13 79.7 99 50.5
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.4e-13 79.7 103 52.4
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.4e-13 79.7 103 52.4
Medtr5g034360 Medicago truncatula HOM05D007293 ORTHO05D009143 2.4e-13 79.0 99 56.6
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 2.4e-13 79.0 104 51.9
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 3.1e-13 78.6 104 53.8
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 7.0e-13 77.4 94 51.1
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 9.1e-13 77.0 101 49.5
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 1.6e-12 76.3 101 51.5
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 1.6e-12 76.3 101 53.5
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 4.5e-12 74.7 105 48.6
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 5.9e-12 74.3 102 50.0
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 5.9e-12 74.3 106 50.9
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 1.0e-11 73.6 107 47.7
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 1.7e-11 72.8 102 52.0
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.7e-11 72.8 105 47.6
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 2.9e-11 72.0 113 46.9
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 6.5e-11 70.9 98 48.0
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 6.5e-11 70.9 105 46.7
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 6.5e-11 70.9 104 47.1
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 8.5e-11 70.5 107 48.6
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 1.9e-10 69.3 104 47.1
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 3.2e-10 68.6 102 49.0
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 3.2e-10 68.6 100 52.0
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 4.2e-10 68.2 98 50.0
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 5.5e-10 67.8 98 50.0
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 5.5e-10 67.8 104 47.1
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 7.2e-10 67.4 100 50.0
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 7.2e-10 67.4 104 48.1
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 2.7e-09 65.5 100 49.0
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 2.7e-09 65.5 104 47.1
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 3.6e-09 65.1 103 47.6
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 6.1e-09 64.3 101 46.5
FAN07G2443 Fragaria x ananassa HOM05D007293 ORTHO05D009143 8.0e-09 63.9 90 53.3
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 1.0e-08 63.5 100 50.0
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 1.8e-08 62.8 85 52.9
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 2.3e-08 62.4 111 44.1
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 6.7e-08 60.8 100 46.0
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 8.8e-08 60.5 101 45.5
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 8.8e-08 60.5 101 45.5
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 8.8e-08 60.5 101 46.5
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 1.1e-07 60.1 112 45.5
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 3.3e-07 58.5 102 47.1
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 3.3e-07 58.5 102 47.1
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 4.4e-07 58.2 112 45.5
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 7.5e-07 57.4 101 45.5
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 7.5e-07 57.4 101 45.5
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 1.7e-06 56.2 108 43.5
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 1.7e-06 56.2 109 43.1


User provided reference genes

Program Settings