Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 1.9e-119 432.6 224 100.0
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 2.6e-100 369.0 228 84.6
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.8e-98 362.8 221 82.4
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 3.8e-96 355.1 206 87.4
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 1.6e-94 349.7 206 86.4
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 1.1e-90 337.0 208 82.2
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 7.0e-90 334.3 205 79.0
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 6.6e-88 327.8 208 77.4
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 8.6e-88 327.4 208 76.9
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 2.1e-86 322.8 224 68.8
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 9.8e-84 313.9 208 77.9
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 3.9e-80 302.0 208 73.1
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 6.6e-80 301.2 204 74.5
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 2.1e-78 296.2 221 65.2
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 2.8e-78 295.8 205 68.8
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 3.6e-78 295.4 208 67.8
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.4e-77 293.5 205 69.3
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 2.3e-77 292.7 204 68.6
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 2.3e-77 292.7 207 65.2
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 5.2e-77 291.6 208 67.8
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 2.6e-76 289.3 214 65.4
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 9.8e-76 287.3 207 64.3
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 2.2e-75 286.2 205 66.3
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.2e-75 286.2 205 65.4
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 2.4e-74 282.7 208 66.3
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 4.1e-74 282.0 205 65.4
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 6.0e-73 278.1 205 62.9
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.3e-72 276.9 204 65.2
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 1.7e-72 276.6 207 62.3
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 3.0e-72 275.8 207 63.3
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 3.9e-72 275.4 205 64.9
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-71 273.5 205 64.4
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 1.5e-71 273.5 221 60.2
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 3.3e-71 272.3 203 64.0
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 4.3e-71 271.9 205 63.9
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 5.6e-71 271.6 205 62.4
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 2.1e-70 269.6 213 62.9
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 2.1e-70 269.6 207 60.4
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.8e-70 269.2 205 63.4
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.8e-70 269.2 208 62.5
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 8.1e-70 267.7 205 62.0
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 1.4e-69 266.9 208 61.1
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 1.8e-69 266.5 200 63.5
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 2.3e-69 266.2 207 60.9
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 3.1e-69 265.8 208 59.1
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 4.0e-69 265.4 206 60.7
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 1.2e-68 263.8 205 61.5
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 7.5e-68 261.2 205 60.0
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 1.7e-67 260.0 208 57.2
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 3.7e-67 258.8 206 59.2
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 6.4e-67 258.1 208 59.6
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 6.4e-67 258.1 207 60.4
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 6.4e-67 258.1 205 58.5
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 5.4e-66 255.0 205 57.1
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 1.2e-65 253.8 205 58.0
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 1.2e-65 253.8 205 58.0
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 1.6e-65 253.4 203 58.6
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 2.1e-65 253.1 206 58.3
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 2.7e-65 252.7 205 57.1
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 2.7e-65 252.7 205 56.6
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 1.3e-64 250.4 205 56.6
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.3e-64 250.4 205 56.1
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 6.6e-64 248.1 205 57.6
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 6.6e-64 248.1 208 56.7
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 8.6e-64 247.7 205 56.1
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.5e-63 246.1 205 56.1
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 2.5e-63 246.1 205 57.1
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 3.3e-63 245.7 189 63.5
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 7.3e-63 244.6 200 60.5
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 1.4e-61 240.4 197 57.4
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 2.3e-61 239.6 197 57.4
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 2.0e-60 236.5 197 56.9
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 5.8e-60 235.0 204 53.9
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 9.9e-60 234.2 220 55.5
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 3.7e-59 232.3 194 57.2
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.0e-56 224.2 243 49.0
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 9.6e-55 217.6 205 55.6
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 2.8e-54 216.1 203 49.3
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.6e-54 215.7 207 53.6
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.4e-52 208.8 205 52.7
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.7e-49 199.5 152 63.2
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.7e-49 199.5 151 60.9
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 4.6e-49 198.7 205 49.3
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 4.6e-49 198.7 205 42.9
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 1.3e-48 197.2 184 54.9
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.3e-48 197.2 158 60.8
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.7e-48 196.8 178 55.6
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 8.7e-48 194.5 208 49.5
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 1.5e-47 193.7 230 47.0
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 4.3e-47 192.2 214 44.4
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 1.1e-45 187.6 122 68.9
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 3.9e-40 169.1 217 46.1
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 6.6e-40 168.3 126 65.1
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.6e-38 163.7 127 60.6
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 3.6e-38 162.5 210 41.4
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 9.9e-36 154.5 96 75.0
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 6.7e-32 141.7 91 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 8.7e-32 141.4 200 38.5
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 1.1e-26 124.4 79 73.4
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 6.3e-22 108.6 166 32.5
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.1e-21 106.3 89 57.3
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 5.3e-21 105.5 89 57.3
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 6.1e-17 92.0 245 29.0
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.1e-13 79.7 164 36.0
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.1e-13 79.7 164 36.0
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 9.4e-10 68.2 131 35.1
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.2e-09 67.8 157 33.1
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 6.1e-09 65.5 148 33.1
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 7.9e-09 65.1 72 48.6
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 5.7e-07 58.9 47 59.6
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.3e-06 57.8 44 63.6


User provided reference genes

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