Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.7e-106 389.4 210 100.0
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.6e-99 366.3 210 94.8
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 3.6e-56 222.2 211 64.5
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.2e-53 213.0 215 61.4
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 6.4e-53 211.5 211 61.6
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 1.9e-49 199.9 229 53.7
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 5.3e-47 191.8 99 97.0
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.1e-44 184.1 224 50.9
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 4.2e-44 182.2 226 50.4
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 5.4e-44 181.8 219 52.5
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 2.7e-43 179.5 221 54.3
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 1.1e-41 174.1 209 52.6
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 2.5e-41 172.9 220 51.8
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 6.2e-40 168.3 209 52.2
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 6.9e-39 164.9 213 52.1
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 3.4e-38 162.5 214 51.4
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 4.2e-36 155.6 221 45.2
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 3.5e-35 152.5 221 47.1
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 3.9e-34 149.1 221 47.5
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 5.7e-33 145.2 220 46.8
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 1.3e-32 144.1 215 43.7
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 4.8e-32 142.1 210 43.8
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 6.2e-32 141.7 213 42.7
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 8.2e-32 141.4 215 43.7
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.8e-31 140.2 218 41.7
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 6.9e-31 138.3 202 42.6
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 6.9e-31 138.3 230 41.7
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 2.6e-30 136.3 196 45.9
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 7.6e-30 134.8 217 42.9
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.6e-30 134.8 222 41.0
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.0e-29 134.4 223 42.2
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.0e-29 134.4 221 40.3
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.3e-29 134.0 204 46.1
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.3e-29 134.0 226 41.2
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.7e-29 133.7 229 41.9
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.7e-29 133.7 219 42.0
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 2.2e-29 133.3 234 37.6
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 2.9e-29 132.9 179 48.0
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.9e-29 132.9 179 48.0
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.0e-29 132.1 159 49.7
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 5.0e-29 132.1 224 41.1
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.4e-28 130.6 215 40.5
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.9e-28 130.2 217 41.5
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.9e-28 130.2 215 40.5
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 4.2e-28 129.0 239 40.6
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 4.2e-28 129.0 215 40.0
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.5e-28 128.6 198 44.9
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 7.1e-28 128.3 207 42.5
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.2e-27 127.5 224 42.4
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 2.1e-27 126.7 205 37.6
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 2.7e-27 126.3 228 43.4
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.7e-27 126.3 222 41.4
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 6.1e-27 125.2 201 39.8
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 6.1e-27 125.2 268 36.6
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 7.9e-27 124.8 175 45.7
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.0e-26 124.4 205 41.0
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.3e-26 124.0 250 40.4
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.8e-26 123.6 202 42.1
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.8e-26 123.6 208 37.0
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.3e-26 123.2 210 42.4
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 2.3e-26 123.2 219 40.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 3.9e-26 122.5 209 41.6
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 3.9e-26 122.5 222 40.5
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 8.7e-26 121.3 233 37.3
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 8.7e-26 121.3 219 42.0
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.5e-25 120.6 201 41.3
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.5e-25 120.6 205 43.4
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.9e-25 120.2 231 41.1
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.9e-25 120.2 218 38.1
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 2.5e-25 119.8 219 40.6
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 3.3e-25 119.4 214 42.5
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 3.3e-25 119.4 226 38.9
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 4.3e-25 119.0 216 39.8
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 4.3e-25 119.0 216 38.9
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 4.3e-25 119.0 194 39.7
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 5.7e-25 118.6 224 40.6
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 9.7e-25 117.9 235 36.6
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.3e-24 117.5 219 37.4
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 1.3e-24 117.5 182 42.9
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 2.8e-24 116.3 240 37.1
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 4.8e-24 115.5 218 38.5
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 6.3e-24 115.2 207 38.2
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 8.2e-24 114.8 232 39.7
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 8.2e-24 114.8 223 39.0
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.1e-23 114.4 205 40.5
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 1.1e-23 114.4 205 40.5
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.4e-23 114.0 212 39.6
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 3.1e-23 112.8 205 40.0
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 4.1e-23 112.5 205 40.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 4.1e-23 112.5 212 39.2
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 5.3e-23 112.1 215 38.1
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 9.0e-23 111.3 160 46.2
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 4.5e-22 109.0 206 39.3
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 4.5e-22 109.0 161 46.0
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.3e-21 107.5 252 36.1
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 5.0e-21 105.5 223 37.2
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 5.0e-21 105.5 223 37.2
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 3.2e-20 102.8 213 36.6
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 4.2e-20 102.4 148 41.9
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 5.5e-20 102.1 144 43.1
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 5.5e-20 102.1 160 40.6
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 7.2e-20 101.7 186 39.2
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 9.4e-20 101.3 191 40.3
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 4.6e-19 99.0 205 38.0
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 1.0e-18 97.8 206 35.0
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.3e-18 96.7 197 38.1
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 2.3e-18 96.7 206 36.9
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 8.8e-18 94.7 205 34.6
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.1e-15 87.8 162 37.7
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 6.9e-15 85.1 169 36.7
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 6.9e-15 85.1 80 50.0
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 3.4e-14 82.8 208 33.2
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 5.9e-14 82.0 159 40.3
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 5.9e-14 82.0 178 34.3
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.3e-13 80.9 159 40.3
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.4e-12 77.4 160 39.4
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 7.2e-12 75.1 180 33.3
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 1.5e-09 67.4 224 28.1
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.6e-09 66.6 141 39.7
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 4.4e-09 65.9 177 30.5
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 8.2e-08 61.6 63 47.6
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 2.4e-07 60.1 215 30.7


User provided reference genes

Program Settings