Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13848_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.1e-194 682.2 337 100.0
Ca_13847_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.4e-136 487.6 361 68.7
Ca_03536_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.5e-120 434.5 371 63.6
Ca_07368_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-118 430.3 456 53.9
Ca_04804_v3 Cicer arietinum L. HOM05D000047 ORTHO05D015604 1.6e-101 373.6 260 70.4
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.4e-96 355.5 616 39.3
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-94 350.5 538 43.1
Ca_14960_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.6e-93 345.5 267 69.3
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.2e-85 320.9 171 91.8
Ca_04496_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.4e-80 302.4 154 95.5
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.6e-72 276.6 171 77.2
Ca_14479_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.2e-70 269.6 153 86.3
Ca_07046_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.2e-70 269.2 191 72.3
Ca_19351_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 9.3e-70 268.1 143 92.3
Ca_06964_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000589 2.1e-66 256.9 171 73.1
Ca_12330_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.3e-65 252.3 156 75.6
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 8.4e-63 245.0 615 31.5
Ca_19272_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 8.4e-63 245.0 132 92.4
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.7e-61 240.0 792 28.7
Ca_07643_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 6.7e-60 235.3 344 43.6
Ca_02998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.7e-58 229.6 486 37.2
Ca_12132_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.3e-55 221.1 117 94.0
Ca_19966_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.5e-53 213.0 227 53.3
Ca_06732_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 7.9e-53 211.8 136 74.3
Ca_30319_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.5e-46 190.3 126 73.8
Ca_23089_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.5e-45 186.4 133 70.7
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.0e-44 184.9 142 69.7
Ca_04945_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 8.2e-42 175.3 274 40.9
Ca_26135_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 8.2e-42 175.3 90 94.4
Ca_19747_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.1e-41 174.9 166 58.4
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.1e-41 173.3 164 57.9
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.1e-38 164.9 335 39.1
Ca_19521_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.3e-34 151.4 117 68.4
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 1.1e-27 128.3 177 43.5
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 2.6e-27 127.1 228 36.8
Ca_04839_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.4e-27 125.6 219 37.9
Ca_13990_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.8e-26 123.6 77 79.2
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.1e-25 119.8 196 36.7
Ca_13752_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.3e-25 119.4 78 75.6
Ca_11754_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.8e-23 113.2 120 55.0
Ca_27971_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.1e-22 111.7 74 71.6
Thecc.09G167400 Theobroma cacao HOM05D000047 ORTHO05D000589 1.5e-22 111.3 216 34.3
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 8.0e-21 105.5 185 37.3
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 2.3e-20 104.0 180 36.1
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 5.7e-19 99.4 181 34.8
TPR.G40443 Trifolium pratense HOM05D000047 ORTHO05D000589 5.7e-19 99.4 184 36.4
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 7.5e-19 99.0 181 34.8
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 7.5e-19 99.0 181 34.8
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 6.3e-18 95.9 218 30.3
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 1.1e-17 95.1 159 33.3
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 4.1e-17 93.2 195 31.8
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 4.1e-17 93.2 195 31.8
Duzib114G0732 Durio zibethinus HOM05D000047 ORTHO05D000589 1.2e-16 91.7 162 32.1
Ca_06966_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.5e-16 89.7 90 52.2
Ca_27714_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.3e-15 88.2 117 47.0
Ca_02596_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.5e-14 84.0 181 38.7
Sopen01g013970 Solanum pennellii HOM05D000047 ORTHO05D000589 7.2e-14 82.4 153 36.6
Ca_22936_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.2e-13 81.6 87 54.0
Sopen05g011640 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-13 81.6 163 35.6
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 1.6e-13 81.3 155 34.2
Sopen01g019870 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-13 80.9 177 33.9
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.7e-13 80.5 186 32.8
COL.COLO4_37417 Corchorus olitorius HOM05D000047 ORTHO05D000589 4.7e-13 79.7 193 29.5
Sopen10g026950 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-13 79.7 177 33.3
PGSC0003DMG400022100 Solanum tuberosum HOM05D000047 ORTHO05D000589 1.0e-12 78.6 181 33.7
Sopen02g008640 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-12 78.2 182 32.4
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-12 78.2 152 36.8
TWI18G1396 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.4e-12 78.2 186 30.1
Ca_20044_v3 Cicer arietinum L. HOM05D010089 ORTHO05D012093 1.8e-12 77.8 39 89.7
Duzib268G1526 Durio zibethinus HOM05D000047 ORTHO05D000589 1.8e-12 77.8 200 28.5
Sopen12g015710 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-12 77.8 163 34.4
Sopen12g017170 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-12 77.8 163 32.5
TWI56G0286 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.8e-12 77.8 156 34.0
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 2.3e-12 77.4 182 31.3
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 4.0e-12 76.6 186 30.6
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 5.2e-12 76.3 177 36.7
Sopen01g010260 Solanum pennellii HOM05D000047 ORTHO05D000044 5.2e-12 76.3 151 34.4
Sopen01g016590 Solanum pennellii HOM05D000047 ORTHO05D000589 5.2e-12 76.3 163 32.5
Sopen03g009570 Solanum pennellii HOM05D000047 ORTHO05D000589 6.8e-12 75.9 182 30.8
Sopen06g010460 Solanum pennellii HOM05D000047 ORTHO05D000589 8.8e-12 75.5 163 33.1
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 8.8e-12 75.5 181 32.0
Sopen12g019250 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-11 75.1 167 34.7
Sopen05g022280 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-11 74.7 180 30.0
Sopen05g018910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-11 74.3 180 30.6
Sopen06g013990 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-11 74.3 180 31.1
TWI59G1198 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.0e-11 74.3 177 32.2
Sopen03g011900 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-11 73.9 163 32.5
Ca_06788_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 4.4e-11 73.2 180 32.8
TWI15G0138 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.7e-11 72.8 151 32.5
TWI15G0701 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.7e-11 72.8 175 31.4
Ca_04844_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000002 7.5e-11 72.4 107 46.7
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 9.8e-11 72.0 163 31.9
Ca_12020_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 1.3e-10 71.6 165 33.9
Sopen04g012230 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-10 71.2 181 31.5
Sopen04g023920 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-10 71.2 181 31.5
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 1.7e-10 71.2 200 28.0
Sopen12g012670 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-10 70.9 186 29.6
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-10 69.7 181 31.5
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-10 69.7 361 23.8
Ca_27196_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 6.3e-10 69.3 166 38.0
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 6.3e-10 69.3 155 34.2
Sopen01g017210 Solanum pennellii HOM05D000047 ORTHO05D001422 1.1e-09 68.6 163 31.3
Sopen04g013020 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-09 68.6 263 27.0
Sopen05g022540 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-09 68.6 296 27.0
Sopen01g016210 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-09 68.2 163 34.4
Ca_23456_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 1.8e-09 67.8 141 34.0
Sopen06g010590 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-09 67.8 163 33.1
Sopen07g009210 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-09 67.4 156 32.7
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 2.4e-09 67.4 163 30.7
Sopen01g025530 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-09 67.0 182 29.1
Ca_19543_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.1e-09 66.6 97 47.4
Ca_19865_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 5.4e-09 66.2 104 46.2
Ca_04058_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 7.0e-09 65.9 107 43.9
Sopen05g021780 Solanum pennellii HOM05D000047 ORTHO05D000589 9.1e-09 65.5 157 31.8
Sopen01g020560 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-08 65.1 162 28.4
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-08 65.1 165 30.9
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 1.2e-08 65.1 206 27.7
Ca_27655_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 1.6e-08 64.7 107 43.9
Ca_28022_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 1.6e-08 64.7 107 44.9
Sopen06g011100 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-08 63.5 149 30.9
Thecc.05G072600 Theobroma cacao HOM05D002881 ORTHO05D002983 3.5e-08 63.5 123 35.8
Sopen01g016600 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-08 63.2 163 31.9
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-07 61.6 158 31.0
PGR142G3646 Punica granatum HOM05D000047 ORTHO05D000589 1.7e-07 61.2 178 29.8
Sopen07g017440 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-07 60.8 168 33.3
Sopen11g018130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-07 60.8 140 32.1
Sed0016672 Sechium edule HOM05D000047 ORTHO05D000589 2.9e-07 60.5 89 37.1
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 2.9e-07 60.5 190 27.9
Lalb_Chr03g0038241 Lupinus albus HOM05D000047 ORTHO05D000352 5.0e-07 59.7 174 28.2
Sopen10g007040 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-07 59.7 180 28.9
Ca_02710_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 8.5e-07 58.9 168 32.7
Thecc.10G163100 Theobroma cacao HOM05D000047 ORTHO05D000589 8.5e-07 58.9 101 36.6
PGR031G1973 Punica granatum HOM05D000047 ORTHO05D000044 1.9e-06 57.8 177 27.7
PGR042G0671 Punica granatum HOM05D000047 ORTHO05D007790 1.9e-06 57.8 177 27.7
PGR044G2529 Punica granatum HOM05D000047 ORTHO05D000044 1.9e-06 57.8 177 27.7
PGR083G1005 Punica granatum HOM05D000047 ORTHO05D000044 1.9e-06 57.8 177 27.7
PGR083G1772 Punica granatum HOM05D000047 ORTHO05D007790 1.9e-06 57.8 177 27.7
PGR118G0003 Punica granatum HOM05D000047 ORTHO05D007790 1.9e-06 57.8 177 27.7
TWI34G1550 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.9e-06 57.8 176 28.4
Ca_06604_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 2.5e-06 57.4 84 45.2
Duzib168G2089 Durio zibethinus HOM05D000047 ORTHO05D000589 4.2e-06 56.6 100 38.0
PGR031G2480 Punica granatum HOM05D000047 ORTHO05D007790 4.2e-06 56.6 178 28.1
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 7.2e-06 55.8 188 25.5
Sopen02g006620 Solanum pennellii HOM05D000047 ORTHO05D000589 9.5e-06 55.5 127 30.7
Sopen02g008900 Solanum pennellii HOM05D000047 ORTHO05D000589 9.5e-06 55.5 139 30.9
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 9.5e-06 55.5 154 27.3


User provided reference genes

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