Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13840_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.5e-33 142.9 71 100.0
Ca_16239_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.4e-22 107.5 70 77.1
Ca_02484_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-16 87.0 69 66.7
PGSC0003DMG400046219 Solanum tuberosum HOM05D000002 ORTHO05D000001 1.4e-15 85.9 70 61.4
CAN.G74.41 Capsicum annuum HOM05D000696 ORTHO05D001068 4.0e-15 84.3 69 59.4
Ca_28067_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.6e-14 81.6 68 63.2
CiPaw.14G083000 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.7e-13 79.0 69 55.1
Ca_03858_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.9e-13 78.2 68 64.7
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-13 77.4 70 58.6
QL11p039861 Quercus lobata HOM05D000002 ORTHO05D000001 8.3e-13 76.6 70 58.6
THA.LOC104814053 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.5e-11 71.2 69 55.1
CSS0046672 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-11 70.9 69 50.7
PSO013G0135 Papaver somniferum HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 51.4
EL10Ac4g08708 Beta vulgaris HOM05D000002 ORTHO05D000001 7.8e-11 70.1 59 62.7
PSO732G0520 Papaver somniferum HOM05D000002 ORTHO05D000001 7.8e-11 70.1 70 50.0
AUR62037961 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-10 69.7 70 50.0
Sed0022174 Sechium edule HOM05D000002 ORTHO05D000001 1.0e-10 69.7 71 47.9
PSO210G4029 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-10 69.3 70 51.4
PSO384G4495 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-10 69.3 70 51.4
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-10 68.6 70 51.4
PSO190G0003 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-10 68.6 70 50.0
TWI77G0407 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.0e-10 68.2 70 50.0
CAN.G370.97 Capsicum annuum HOM05D000828 ORTHO05D000623 3.9e-10 67.8 55 60.0
PSO017G5132 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-10 67.8 70 50.0
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-10 67.4 70 40.0
Sed0018924 Sechium edule HOM05D000002 ORTHO05D000001 5.1e-10 67.4 71 46.5
AT1G48720 Arabidopsis thaliana HOM05D000002 ORTHO05D000001 8.6e-10 66.6 69 49.3
SHI19884 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-10 66.6 70 44.3
Sed0023100 Sechium edule HOM05D000002 ORTHO05D000001 8.6e-10 66.6 70 45.7
AUR62009291 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.1e-09 66.2 70 51.4
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 66.2 70 44.3
PSO781G0062 Papaver somniferum HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 48.6
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 44.3
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 44.3
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 44.3
SHI02822 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 64.7 70 44.3
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-09 63.9 70 38.6
SHI05086 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-09 63.9 71 43.7
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-09 63.9 70 42.9
SHI18342 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-09 63.9 70 42.9
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-09 63.9 70 44.3
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-09 63.2 70 38.6
PSO832G0380 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-08 62.8 70 47.1
SHI37456 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-08 62.0 70 44.3
CSS0000779 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 2.8e-08 61.6 70 37.1
AUR62033534 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.8e-08 61.6 65 47.7
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-08 61.6 70 41.4
SHI23530 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-08 61.6 69 42.0
FvH4_7g11221 Fragaria vesca HOM05D000002 ORTHO05D000001 3.6e-08 61.2 61 49.2
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-08 61.2 69 42.0
Sed0005115 Sechium edule HOM05D000002 ORTHO05D000001 3.6e-08 61.2 65 46.2
Sed0007235 Sechium edule HOM05D000002 ORTHO05D000001 3.6e-08 61.2 65 44.6
SHI14662 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-08 60.8 71 42.3
SHI17759 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-08 60.8 70 40.0
SHI00983 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-08 60.5 68 42.6
SHI02929 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-08 60.5 71 42.3
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-08 60.5 70 41.4
SHI27923 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-08 60.5 68 42.6
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.1e-08 60.1 73 39.7
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-08 60.1 68 44.1
SHI37457 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-08 60.1 70 42.9
SHI44612 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-08 60.1 70 41.4
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 59.7 70 37.1
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 59.7 70 40.0
SHI45229 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 59.7 71 42.3
AUR62005322 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.4e-07 59.3 73 41.1
SHI44368 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-07 59.3 70 41.4
AUR62010047 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.8e-07 58.9 73 39.7
AUR62020335 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.8e-07 58.9 73 39.7
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 58.9 70 41.4
SHI19085 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 58.5 70 41.4
SHI31472 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 58.5 70 41.4
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 3.1e-07 58.2 70 41.4
CANSAT21G0923 Cannabis sativa HOM05D000002 ORTHO05D000001 4.0e-07 57.8 70 42.9
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-07 57.4 63 41.3
TPR.G8649 Trifolium pratense HOM05D000002 ORTHO05D000001 5.2e-07 57.4 60 50.0
Ca_27878_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.8e-07 57.0 53 54.7
PSO210G4968 Papaver somniferum HOM05D000002 ORTHO05D000001 6.8e-07 57.0 70 42.9
SHI32854 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-07 57.0 70 38.6
Gorai.013G068100 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 71 39.4
Sabra13G0054700 Salix brachista HOM05D000002 ORTHO05D011000 1.2e-06 56.2 64 40.6
SHI27649 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 71 38.0
THA.LOC104800056 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 70 41.4
FvH4_5g22952 Fragaria vesca HOM05D019108 ORTHO05D000001 1.5e-06 55.8 62 38.7
SHI12969 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 55.8 70 38.6
SEGI_02381 Sequoiadendron giganteum HOM05D003001 ORTHO05D026104 2.0e-06 55.5 73 43.8
SEGI_35443 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.0e-06 55.5 73 42.5
TWI18G0957 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.0e-06 55.5 71 43.7
Atru.chr6.330 Acer truncatum HOM05D000002 ORTHO05D000001 2.6e-06 55.1 71 46.5
SEGI_32204 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.6e-06 55.1 73 39.7
Atru.chr3.4253 Acer truncatum HOM05D000264 ORTHO05D000152 3.4e-06 54.7 73 39.7
SHI29412 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-06 54.7 59 42.4
SEGI_09407 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.4e-06 54.7 72 43.1
TWI31G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.4e-06 54.7 70 41.4
Gohir.D08G059650 Gossypium hirsutum HOM05D000002 ORTHO05D000001 4.4e-06 54.3 71 38.0
PSO832G3521 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-06 54.3 70 40.0
Potri.011G016400 Populus trichocarpa HOM05D000097 ORTHO05D000041 4.4e-06 54.3 70 38.6
SHI19100 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-06 54.3 70 38.6
THA.LOC104810237 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.4e-06 54.3 72 41.7
CSS0000608 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-06 53.9 73 37.0
SEGI_27320 Sequoiadendron giganteum HOM05D000046 ORTHO05D000001 5.8e-06 53.9 71 42.3
VMungo0331G1422 Vigna mungo HOM05D003553 ORTHO05D005072 5.8e-06 53.9 70 37.1
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 7.6e-06 53.5 70 41.4
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 7.6e-06 53.5 70 41.4
PSO063G0686 Papaver somniferum HOM05D000002 ORTHO05D000001 7.6e-06 53.5 70 38.6
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 7.6e-06 53.5 70 35.7
SHI21848 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 53.5 70 37.1
Gorai.N009900 Gossypium raimondii HOM05D000002 ORTHO05D000001 9.9e-06 53.1 74 44.6
RcHm_v2.0_Chr5g0064041 Rosa chinensis HOM05D000002 ORTHO05D000001 9.9e-06 53.1 70 35.7
SHI49496 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-06 53.1 69 39.1


User provided reference genes

Program Settings