Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.6e-45 184.5 89 100.0
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.3e-34 147.1 91 82.4
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 1.7e-18 95.9 55 83.6
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 2.2e-18 95.5 55 83.6
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.8e-17 92.4 59 74.6
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 4.1e-17 91.3 73 67.1
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 9.1e-17 90.1 55 78.2
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.2e-16 89.7 55 76.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 3.5e-16 88.2 55 76.4
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 4.5e-16 87.8 55 72.7
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 4.5e-16 87.8 55 72.7
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 5.9e-16 87.4 55 72.7
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 5.9e-16 87.4 55 74.5
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.6e-13 78.2 57 66.7
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 8.0e-13 77.0 60 63.3
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 2.3e-12 75.5 57 63.2
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.3e-12 75.5 56 66.1
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.0e-12 75.1 57 63.2
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 5.2e-12 74.3 60 63.3
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 6.8e-12 73.9 61 60.7
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 8.9e-12 73.6 60 60.0
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 8.9e-12 73.6 57 64.9
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.5e-11 72.8 60 60.0
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 2.0e-11 72.4 61 59.0
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 2.0e-11 72.4 61 57.4
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.6e-11 72.0 60 58.3
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.4e-11 71.6 60 58.3
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 3.4e-11 71.6 61 57.4
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 3.4e-11 71.6 57 59.6
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 3.4e-11 71.6 57 61.4
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.4e-11 71.2 60 58.3
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 9.8e-11 70.1 60 58.3
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 9.8e-11 70.1 60 58.3
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.3e-10 69.7 57 56.1
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.3e-10 69.7 60 56.7
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.7e-10 69.3 60 55.0
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.7e-10 69.3 56 60.7
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.7e-10 69.3 57 59.6
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 2.2e-10 68.9 56 60.7
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 2.2e-10 68.9 60 53.3
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 2.2e-10 68.9 58 60.3
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.8e-10 68.6 57 59.6
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 2.8e-10 68.6 57 54.4
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 3.7e-10 68.2 60 55.0
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 4.9e-10 67.8 57 54.4
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 4.9e-10 67.8 61 54.1
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 6.3e-10 67.4 57 54.4
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 8.3e-10 67.0 60 55.0
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.1e-09 66.6 57 57.9
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.4e-09 66.2 57 56.1
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.8e-09 65.9 60 53.3
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 1.8e-09 65.9 60 51.7
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.8e-09 65.9 57 54.4
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 1.8e-09 65.9 60 55.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.8e-09 65.9 60 51.7
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.8e-09 65.9 56 51.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 2.4e-09 65.5 60 53.3
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.1e-09 65.1 57 57.9
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 3.1e-09 65.1 58 56.9
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.1e-09 65.1 53 60.4
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 4.1e-09 64.7 60 53.3
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 7.0e-09 63.9 56 58.9
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 7.0e-09 63.9 57 54.4
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 9.2e-09 63.5 60 50.0
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 9.2e-09 63.5 56 53.6
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 1.2e-08 63.2 56 57.1
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.2e-08 63.2 60 53.3
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.2e-08 63.2 58 55.2
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.2e-08 63.2 60 51.7
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.6e-08 62.8 60 50.0
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.6e-08 62.8 60 51.7
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 2.0e-08 62.4 56 53.6
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.7e-08 62.0 57 52.6
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 2.7e-08 62.0 56 53.6
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.7e-08 62.0 53 58.5
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.7e-08 62.0 57 54.4
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 3.5e-08 61.6 56 55.4
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 3.5e-08 61.6 56 53.6
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.5e-08 61.6 57 50.9
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 7.8e-08 60.5 60 48.3
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 7.8e-08 60.5 56 51.8
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.0e-07 60.1 55 52.7
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.3e-07 59.7 57 50.9
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 5.0e-07 57.8 82 40.2
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 6.6e-07 57.4 61 47.5
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 6.6e-07 57.4 57 50.9
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 6.6e-07 57.4 57 50.9
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 6.6e-07 57.4 57 50.9
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 8.6e-07 57.0 53 54.7
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.1e-06 56.6 56 48.2
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 4.3e-06 54.7 53 50.9
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 4.3e-06 54.7 57 47.4
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 5.6e-06 54.3 54 50.0


User provided reference genes

Program Settings