Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 6.2e-140 500.7 246 100.0
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 5.5e-88 328.2 224 74.6
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 8.8e-86 320.9 217 75.6
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 3.7e-84 315.5 186 87.6
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 5.4e-67 258.5 229 62.4
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 1.4e-62 243.8 224 60.3
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 5.2e-62 241.9 221 62.0
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 2.0e-58 229.9 230 59.1
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 3.6e-55 219.2 221 58.4
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 7.8e-50 201.4 116 88.8
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 3.9e-49 199.1 230 52.6
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.2e-47 194.1 230 52.2
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 1.8e-46 190.3 215 52.6
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 2.3e-46 189.9 215 52.6
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 2.6e-45 186.4 224 51.8
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 4.7e-39 165.6 182 57.1
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 1.1e-30 137.9 200 44.5
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 2.0e-29 133.7 236 41.5
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 3.8e-28 129.4 214 42.1
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 8.4e-28 128.3 239 38.5
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 2.1e-26 123.6 221 39.8
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 4.6e-26 122.5 221 38.0
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 3.9e-25 119.4 215 39.5
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 3.9e-25 119.4 202 41.6
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 6.6e-25 118.6 203 42.4
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 8.7e-25 118.2 210 38.6
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 2.1e-23 113.6 210 38.1
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.1e-23 113.6 219 35.6
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.8e-23 113.2 70 82.9
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 4.8e-23 112.5 219 35.6
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 6.2e-23 112.1 219 39.3
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.4e-22 110.2 233 37.3
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 3.1e-22 109.8 221 35.3
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 5.3e-22 109.0 211 40.8
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 6.9e-22 108.6 227 34.8
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 9.0e-22 108.2 201 40.8
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 9.0e-22 108.2 221 35.7
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 1.5e-21 107.5 219 38.8
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 2.0e-21 107.1 194 40.7
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 4.5e-21 105.9 205 39.5
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 7.6e-21 105.1 210 40.5
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.7e-20 104.0 221 40.3
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 8.4e-20 101.7 218 36.7
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 7.1e-19 98.6 204 38.2
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 9.3e-19 98.2 217 34.6
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 2.7e-18 96.7 186 37.1
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 3.5e-18 96.3 254 33.1
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.0e-17 94.7 198 34.8
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 1.3e-17 94.4 206 33.5
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 3.9e-17 92.8 220 34.5
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 5.1e-17 92.4 197 35.5
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 1.5e-16 90.9 202 33.7
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 3.3e-16 89.7 217 32.7
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 3.3e-16 89.7 211 31.8
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 4.3e-16 89.4 209 34.9
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 4.3e-16 89.4 213 34.7
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 4.3e-16 89.4 195 34.9
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 5.6e-16 89.0 192 35.4
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 9.6e-16 88.2 196 33.7
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.3e-15 87.8 196 35.7
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 1.6e-15 87.4 200 36.5
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 1.6e-15 87.4 212 32.1
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 2.8e-15 86.7 226 30.1
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 6.2e-15 85.5 197 35.5
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 3.1e-14 83.2 217 33.6
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 4.0e-14 82.8 201 35.8
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 5.3e-14 82.4 194 33.0
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 9.0e-14 81.6 213 34.3
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.5e-13 80.9 192 33.9
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 2.0e-13 80.5 196 34.2
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 2.6e-13 80.1 201 31.8
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 3.4e-13 79.7 213 34.3
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 4.5e-13 79.3 195 33.3
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 1.7e-12 77.4 192 30.7
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 3.8e-12 76.3 191 35.1
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 6.4e-12 75.5 191 34.6
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 1.9e-11 73.9 71 52.1
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 1.9e-11 73.9 78 50.0
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 3.2e-11 73.2 54 61.1
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 3.2e-11 73.2 46 65.2
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 4.2e-11 72.8 197 34.5
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 4.2e-11 72.8 213 28.6
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 4.2e-11 72.8 54 59.3
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 5.5e-11 72.4 54 59.3
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 5.5e-11 72.4 230 30.9
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 1.6e-10 70.9 200 33.5
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 2.1e-10 70.5 197 30.5
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 2.1e-10 70.5 197 33.0
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 2.1e-10 70.5 191 33.0
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 4.6e-10 69.3 186 35.5
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 4.6e-10 69.3 49 59.2
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 6.0e-10 68.9 196 32.7
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 6.0e-10 68.9 49 61.2
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 3.0e-09 66.6 42 66.7
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 3.0e-09 66.6 106 39.6
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 5.1e-09 65.9 49 55.1
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 5.1e-09 65.9 49 55.1
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 5.1e-09 65.9 187 32.6
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 8.7e-09 65.1 195 30.3
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 8.7e-09 65.1 47 57.4
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 1.1e-08 64.7 48 54.2
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 1.1e-08 64.7 48 54.2
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 1.1e-08 64.7 48 54.2
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 2.5e-08 63.5 225 28.0
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 2.1e-07 60.5 192 31.2
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 57 47.4
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 4.8e-07 59.3 57 47.4
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 5.3e-06 55.8 45 51.1


User provided reference genes

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