Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13714_v3 Cicer arietinum L. HOM05D000141 ORTHO05D147664 1.5e-159 566.2 299 100.0
Ca_10156_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 2.6e-84 316.2 189 91.0
Psat6g152280 Pisum sativum HOM05D000141 ORTHO05D000780 8.9e-48 194.9 193 64.2
Medtr1g083770 Medicago truncatula HOM05D000141 ORTHO05D000780 2.6e-39 166.8 219 55.7
Medtr7g112420 Medicago truncatula HOM05D000141 ORTHO05D000780 5.4e-37 159.1 198 52.5
TPR.G17736 Trifolium pratense HOM05D000141 ORTHO05D000780 7.8e-36 155.2 216 50.0
Glyma.10G149500 Glycine max HOM05D000141 ORTHO05D000780 1.2e-33 147.9 213 52.6
Phvul.007G199000 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 3.6e-33 146.4 234 46.6
Ca_09325_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 8.0e-33 145.2 253 43.9
Glyma.19G230100 Glycine max HOM05D000141 ORTHO05D000780 1.5e-31 141.0 205 46.3
Lj1g0002894 Lotus japonicus HOM05D000141 ORTHO05D000780 5.4e-29 132.5 298 35.6
Psat0s1701g0040 Pisum sativum HOM05D000141 ORTHO05D000780 1.2e-28 131.3 194 46.9
Glyma.03G233100 Glycine max HOM05D000141 ORTHO05D000780 1.6e-28 131.0 207 44.0
Lalb_Chr21g0310431 Lupinus albus HOM05D000141 ORTHO05D000780 7.8e-28 128.6 204 48.0
Lalb_Chr15g0077551 Lupinus albus HOM05D000141 ORTHO05D000780 2.3e-27 127.1 275 40.0
TPR.G1608 Trifolium pratense HOM05D000141 ORTHO05D000780 1.1e-26 124.8 205 45.9
Phvul.001G226700 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 1.6e-25 120.9 234 38.9
Lalb_Chr04g0260541 Lupinus albus HOM05D000141 ORTHO05D000780 4.0e-24 116.3 223 41.3
VMungo1383G2616 Vigna mungo HOM05D000141 ORTHO05D000780 1.3e-19 101.3 249 36.5
QL03p017919 Quercus lobata HOM05D000141 ORTHO05D000780 6.6e-19 99.0 212 39.2
Potri.013G011500 Populus trichocarpa HOM05D000141 ORTHO05D000780 1.6e-17 94.4 230 35.2
Sabra13G0010100 Salix brachista HOM05D000141 ORTHO05D000780 1.6e-17 94.4 271 33.6
Potri.005G021100 Populus trichocarpa HOM05D000141 ORTHO05D000780 1.5e-15 87.8 246 33.7
CiPaw.08G158200 Carya illinoinensis HOM05D000141 ORTHO05D000780 2.0e-15 87.4 231 37.7
Cfa006675 Carpinus fangiana HOM05D000141 ORTHO05D000780 3.4e-15 86.7 226 36.7
Sabra05G0027100 Salix brachista HOM05D000141 ORTHO05D000780 7.6e-15 85.5 248 33.9
MD12G1209400 Malus domestica HOM05D000141 ORTHO05D000780 1.7e-14 84.3 226 36.7
Ciclev10000131m.g Citrus clementina HOM05D000141 ORTHO05D000780 8.4e-14 82.0 262 31.3
MD04G1196400 Malus domestica HOM05D000141 ORTHO05D000780 8.4e-14 82.0 226 36.7
Manes.08G113800 Manihot esculenta HOM05D000141 ORTHO05D000780 8.4e-14 82.0 244 34.0
ClCG03G017570 Citrullus lanatus HOM05D000141 ORTHO05D000780 9.2e-13 78.6 274 32.8
Hma1.2p1_0472F.1_g159780 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 1.2e-12 78.2 212 33.5
CsaV3_1G038470 Cucumis sativus L. HOM05D000141 ORTHO05D000780 1.6e-12 77.8 270 32.2
CiPaw.07G025900 Carya illinoinensis HOM05D000141 ORTHO05D000780 2.3e-11 73.9 211 36.5
MELO3C015272.2 Cucumis melo HOM05D000141 ORTHO05D000780 3.9e-11 73.2 270 30.7
RcHm_v2.0_Chr3g0456621 Rosa chinensis HOM05D000141 ORTHO05D000780 5.1e-11 72.8 208 35.6
TWI36G1075 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 8.7e-11 72.0 221 33.0
Dinv30854 Davidia involucrata HOM05D000141 ORTHO05D000780 1.5e-10 71.2 227 32.2
TWI56G1115 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 3.3e-10 70.1 265 31.7
CANSAT54G0478 Cannabis sativa HOM05D000141 ORTHO05D000780 1.3e-09 68.2 229 31.0
Dinv24413 Davidia involucrata HOM05D000141 ORTHO05D000780 1.3e-09 68.2 226 31.9
Glyma.19G213600 Glycine max HOM05D000141 ORTHO05D000780 1.1e-08 65.1 201 28.4
Nitab4.5_0009189g0030 Nicotiana tabacum HOM05D000141 ORTHO05D000780 1.4e-08 64.7 252 31.0
Sed0011635 Sechium edule HOM05D000141 ORTHO05D000780 2.4e-08 63.9 262 30.2
Sc09g0002810 Simmondsia chinensis HOM05D000141 ORTHO05D000780 2.4e-08 63.9 184 31.0
Hma1.2p1_1320F.1_g275320 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 4.0e-08 63.2 280 29.3
Phvul.007G217400 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 9.0e-08 62.0 197 29.4
FvH4_6g07070 Fragaria vesca HOM05D000141 ORTHO05D000780 1.5e-07 61.2 209 34.4
Glyma.10G016000 Glycine max HOM05D000141 ORTHO05D000780 1.5e-07 61.2 199 30.7
Glyma.03G217000 Glycine max HOM05D000141 ORTHO05D000780 2.0e-07 60.8 202 29.2
Peaxi162Scf00073g00013 Petunia axillaris HOM05D000141 ORTHO05D000780 2.0e-07 60.8 272 29.4
Eucgr.H03277 Eucalyptus grandis HOM05D000141 ORTHO05D000780 3.4e-07 60.1 223 32.7
CAN.G1273.20 Capsicum annuum HOM05D000141 ORTHO05D000780 5.8e-07 59.3 216 31.9
FAN02G3600 Fragaria x ananassa HOM05D000141 ORTHO05D000780 7.6e-07 58.9 217 32.7
FAN09G0109 Fragaria x ananassa HOM05D000141 ORTHO05D000780 1.3e-06 58.2 218 33.0
Glyma.02G015500 Glycine max HOM05D000141 ORTHO05D000780 1.3e-06 58.2 200 32.0
AUR62000714 Chenopodium quinoa HOM05D000141 ORTHO05D000780 1.7e-06 57.8 244 29.1
CsaV3_4G001020 Cucumis sativus L. HOM05D000141 ORTHO05D000780 1.7e-06 57.8 210 28.6
Lalb_Chr21g0309371 Lupinus albus HOM05D000141 ORTHO05D000780 1.7e-06 57.8 194 30.9
Thecc.05G319100 Theobroma cacao HOM05D000141 ORTHO05D000780 1.7e-06 57.8 250 29.6
VMungo0720G0660 Vigna mungo HOM05D000141 ORTHO05D000780 2.2e-06 57.4 195 28.7
AT5G27000 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 2.9e-06 57.0 182 31.9
Eucgr.H01079 Eucalyptus grandis HOM05D000141 ORTHO05D000780 2.9e-06 57.0 201 31.3
Cpa.g.sc48.130 Carica papaya HOM05D000141 ORTHO05D000780 4.9e-06 56.2 210 29.0
ClCG10G011150 Citrullus lanatus HOM05D000141 ORTHO05D000780 4.9e-06 56.2 210 26.7
Cc02_g34570 Coffea canephora HOM05D000141 ORTHO05D000780 6.4e-06 55.8 188 30.9
MELO3C017936.2 Cucumis melo HOM05D000141 ORTHO05D000780 6.4e-06 55.8 209 28.2
AUR62005249 Chenopodium quinoa HOM05D000141 ORTHO05D000780 8.4e-06 55.5 245 27.8
Manes.09G174500 Manihot esculenta HOM05D000141 ORTHO05D000780 8.4e-06 55.5 125 36.8


User provided reference genes

Program Settings