Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13618_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 6.3e-28 126.7 64 100.0
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 4.7e-15 84.0 60 71.7
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 1.8e-14 82.0 60 68.3
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 5.8e-13 77.0 60 65.0
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 7.5e-13 76.6 60 68.3
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 2.9e-12 74.7 60 65.0
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.1e-11 72.8 60 63.3
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.4e-11 72.4 60 63.3
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 9.2e-11 69.7 60 61.7
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.2e-10 69.3 60 60.0
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.6e-10 68.9 60 60.0
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 5.6e-08 60.5 59 49.2
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 1.6e-07 58.9 69 47.8
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 3.1e-06 54.7 59 50.8
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 3.1e-06 54.7 59 50.8
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 4.0e-06 54.3 59 52.5
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.8e-06 53.5 58 53.4
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.8e-06 53.5 57 52.6
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 8.9e-06 53.1 60 46.7


User provided reference genes

Program Settings