Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 4.6e-112 407.9 205 100.0
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 8.1e-101 370.5 205 88.8
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 1.2e-96 356.7 193 92.7
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 1.4e-92 343.2 193 87.0
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 2.2e-90 335.9 193 87.6
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 1.4e-89 333.2 193 85.5
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 2.4e-89 332.4 208 81.2
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 4.2e-89 331.6 193 85.5
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 1.6e-88 329.7 193 85.0
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 1.6e-88 329.7 193 85.5
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 2.1e-88 329.3 193 85.0
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 2.7e-88 328.9 193 85.0
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 1.3e-87 326.6 193 84.5
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 2.3e-87 325.9 193 84.5
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 3.9e-87 325.1 193 84.5
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 3.9e-87 325.1 193 84.5
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 3.9e-87 325.1 193 83.9
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 3.9e-87 325.1 193 82.9
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 3.9e-87 325.1 193 84.5
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 5.1e-87 324.7 193 82.9
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 5.1e-87 324.7 193 83.9
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 6.6e-87 324.3 197 83.2
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 8.7e-87 323.9 193 83.9
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 8.7e-87 323.9 193 83.9
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 8.7e-87 323.9 204 81.9
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 1.1e-86 323.6 193 84.5
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 1.1e-86 323.6 193 84.5
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 1.5e-86 323.2 193 84.5
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.9e-86 322.8 193 83.9
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 2.5e-86 322.4 193 82.9
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 2.5e-86 322.4 193 84.5
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 3.3e-86 322.0 193 81.9
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 3.3e-86 322.0 193 83.9
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 4.3e-86 321.6 193 83.4
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 7.3e-86 320.9 193 80.8
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 7.3e-86 320.9 193 83.4
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 7.3e-86 320.9 193 83.4
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 1.3e-85 320.1 193 83.4
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 2.1e-85 319.3 193 82.9
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 2.8e-85 318.9 193 81.9
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 3.6e-85 318.5 193 82.9
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 4.8e-85 318.2 193 82.4
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 4.8e-85 318.2 193 82.4
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.2e-85 317.8 193 82.4
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 6.2e-85 317.8 193 82.9
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 8.1e-85 317.4 193 82.4
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 8.1e-85 317.4 193 81.9
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 1.4e-84 316.6 193 81.9
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.4e-84 316.6 193 81.9
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 1.8e-84 316.2 193 82.4
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 1.8e-84 316.2 193 81.9
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 2.4e-84 315.8 193 82.4
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 5.3e-84 314.7 193 82.4
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 1.5e-83 313.2 193 79.8
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 2.0e-83 312.8 193 81.3
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 2.0e-83 312.8 193 80.8
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 3.4e-83 312.0 193 81.9
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 4.5e-83 311.6 193 80.3
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 4.5e-83 311.6 193 81.3
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 9.9e-83 310.5 193 79.8
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 1.3e-82 310.1 193 80.3
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.7e-82 309.7 193 80.8
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 2.2e-82 309.3 193 81.9
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 6.4e-82 307.8 193 79.8
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 1.1e-81 307.0 193 80.8
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 1.4e-81 306.6 193 78.8
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 2.4e-81 305.8 193 81.3
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 3.2e-81 305.4 198 77.3
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 4.2e-81 305.1 193 79.3
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 4.2e-81 305.1 193 79.3
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 1.2e-80 303.5 244 67.6
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 2.1e-80 302.8 192 78.6
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 6.0e-80 301.2 193 77.2
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 7.9e-80 300.8 193 76.7
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 1.0e-79 300.4 193 78.8
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 3.9e-79 298.5 193 76.7
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 3.9e-79 298.5 193 77.2
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 6.7e-79 297.7 193 76.2
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 1.1e-78 297.0 193 76.2
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.5e-78 296.6 193 75.6
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 2.5e-78 295.8 193 75.6
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 2.5e-78 295.8 193 77.2
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 3.3e-78 295.4 193 75.6
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 4.3e-78 295.0 193 75.6
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 4.3e-78 295.0 193 75.1
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 4.3e-78 295.0 193 76.7
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 5.6e-78 294.7 193 75.1
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 7.4e-78 294.3 193 75.1
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 1.1e-76 290.4 193 76.2
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 5.3e-76 288.1 193 76.7
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 7.6e-75 284.3 198 74.2
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 2.4e-73 279.3 193 72.5
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.7e-72 275.8 193 72.0
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 3.5e-72 275.4 193 73.6
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 4.6e-72 275.0 193 71.5
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 6.0e-72 274.6 282 54.6
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 1.3e-71 273.5 173 81.5
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 2.5e-70 269.2 193 68.9
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 7.4e-70 267.7 162 81.5
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 3.4e-67 258.8 207 66.2
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 4.5e-67 258.5 162 79.6
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 8.4e-66 254.2 193 71.5
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 1.2e-64 250.4 161 77.0
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 3.5e-64 248.8 193 67.9
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 4.6e-64 248.4 195 70.3
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 1.4e-60 236.9 193 68.9
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 1.3e-58 230.3 193 63.7
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.6e-56 223.4 193 62.7
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 2.5e-54 216.1 195 60.0
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 2.0e-51 206.5 130 79.2
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 8.8e-47 191.0 162 59.3
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 1.5e-46 190.3 125 76.0
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 4.1e-44 182.2 152 65.8
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 5.9e-43 178.3 162 60.5
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.1e-40 169.9 168 57.7
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 3.7e-37 159.1 101 75.2
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 4.5e-35 152.1 107 70.1
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 1.8e-28 130.2 128 55.5
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 5.2e-23 112.1 180 45.6
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 1.2e-22 110.9 142 48.6
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 2.8e-21 106.3 133 52.6
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 2.8e-21 106.3 129 51.9
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 1.9e-17 93.6 133 45.1
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 3.2e-17 92.8 81 64.2
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 3.0e-15 86.3 52 76.9
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 8.8e-15 84.7 134 47.0
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 1.2e-14 84.3 49 79.6
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 4.4e-14 82.4 54 68.5
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 1.1e-12 77.8 66 59.1
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 1.4e-07 60.8 37 78.4
Medtr4g129075 Medicago truncatula HOM05D005661 ORTHO05D266434 8.9e-07 58.2 32 81.2


User provided reference genes

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