Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.4e-138 496.5 290 100.0
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 5.5e-103 378.3 217 89.4
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 3.9e-101 372.1 215 85.6
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.3e-99 367.1 214 83.2
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 6.9e-98 361.3 214 83.2
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 6.9e-98 361.3 214 82.7
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 7.7e-97 357.8 214 82.2
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 6.5e-96 354.8 214 81.8
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.4e-93 347.1 214 80.4
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 3.9e-93 345.5 214 79.0
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 3.9e-93 345.5 215 78.6
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.9e-93 345.5 213 80.3
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 6.7e-93 344.7 235 74.5
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 6.7e-93 344.7 235 74.5
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 2.0e-92 343.2 213 80.8
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 3.3e-92 342.4 213 80.3
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 3.3e-92 342.4 199 83.4
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 6.3e-91 338.2 214 79.4
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 6.3e-91 338.2 214 79.4
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 6.3e-91 338.2 214 79.0
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 8.2e-91 337.8 214 79.4
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 8.2e-91 337.8 213 77.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.8e-90 336.7 212 77.4
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.8e-90 336.7 213 77.0
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 3.1e-90 335.9 214 76.6
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 3.1e-90 335.9 213 77.5
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 4.1e-90 335.5 213 77.0
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 5.3e-90 335.1 214 78.0
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 6.9e-90 334.7 214 78.0
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 9.1e-90 334.3 213 77.5
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 9.1e-90 334.3 212 78.8
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.2e-89 334.0 212 75.9
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.2e-89 334.0 213 77.9
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.5e-89 333.6 213 76.5
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 3.4e-89 332.4 214 77.1
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 4.5e-89 332.0 214 77.6
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 1.0e-88 330.9 215 75.3
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.0e-88 330.9 212 76.4
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.7e-88 330.1 213 75.1
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.2e-88 329.7 213 75.6
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 3.8e-88 328.9 214 72.9
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 5.0e-88 328.6 229 72.9
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 5.0e-88 328.6 213 75.6
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 8.5e-88 327.8 235 70.6
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.4e-87 327.0 212 75.9
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.4e-87 327.0 213 75.1
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 1.9e-87 326.6 200 80.0
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 3.2e-87 325.9 213 76.1
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 7.2e-87 324.7 213 75.1
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 7.2e-87 324.7 213 75.6
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 9.4e-87 324.3 213 73.7
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 9.4e-87 324.3 212 76.9
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 9.4e-87 324.3 213 76.5
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.2e-86 323.9 215 74.9
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.1e-86 323.2 212 75.5
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.1e-86 323.2 212 75.5
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.1e-86 323.2 245 68.6
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 6.1e-86 321.6 212 75.0
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.3e-85 319.7 213 72.3
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 2.3e-85 319.7 217 72.8
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 2.3e-85 319.7 217 72.8
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 2.3e-85 319.7 217 72.8
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 3.0e-85 319.3 213 73.7
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 5.2e-85 318.5 213 71.8
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.1e-84 317.4 277 68.6
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.5e-84 317.0 217 71.9
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.5e-84 317.0 217 71.9
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 2.0e-84 316.6 215 73.0
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 2.6e-84 316.2 200 76.5
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 7.4e-84 314.7 198 76.8
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 3.7e-83 312.4 197 78.2
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 2.4e-82 309.7 207 72.5
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 5.3e-82 308.5 221 70.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 5.0e-80 302.0 186 79.0
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.2e-79 299.3 213 70.4
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 8.0e-78 294.7 213 71.4
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 8.8e-77 291.2 230 66.5
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.0e-76 290.0 214 69.2
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 7.5e-76 288.1 185 74.6
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.2e-75 286.6 192 71.9
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 2.7e-73 279.6 253 57.7
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 5.0e-72 275.4 276 54.7
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.2e-70 270.8 212 65.6
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 2.3e-69 266.5 169 79.9
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 6.8e-69 265.0 218 61.9
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.2e-68 264.2 186 71.5
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 5.4e-66 255.4 216 59.7
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 7.2e-63 245.0 224 58.9
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 9.5e-63 244.6 158 76.6
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.6e-62 242.7 217 55.3
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.0e-61 239.6 217 56.2
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 4.4e-60 235.7 220 55.5
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.2e-59 233.4 188 63.3
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.8e-59 233.0 172 66.3
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 9.2e-58 228.0 183 63.9
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-54 217.6 212 53.3
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.6e-54 217.2 213 55.4
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 2.8e-54 216.5 186 59.1
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 5.2e-45 185.7 121 75.2
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.2e-41 174.5 124 70.2
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.3e-40 171.0 216 47.7
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.5e-23 114.4 99 51.5
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 9.6e-23 111.7 57 91.2
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 8.1e-22 108.6 57 89.5
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 4.4e-20 102.8 116 50.9
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-18 97.4 119 45.4
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 9.3e-18 95.1 86 59.3
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 2.1e-17 94.0 70 64.3
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.5e-17 93.2 56 76.8
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 8.7e-16 88.6 99 45.5
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 6.9e-13 79.0 41 82.9
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 6.9e-13 79.0 164 34.1
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 2.1e-09 67.4 47 63.8
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 2.7e-09 67.0 201 28.4


User provided reference genes

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