Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 2.0e-36 155.2 78 100.0
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 1.5e-34 149.1 78 96.2
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 1.8e-32 142.1 78 91.0
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 1.3e-30 136.0 78 85.9
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 2.2e-30 135.2 77 87.0
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 3.1e-29 131.3 78 83.3
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 4.1e-29 131.0 78 84.6
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 9.1e-29 129.8 78 82.1
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 2.0e-28 128.6 78 80.8
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 2.7e-28 128.3 78 80.8
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 2.7e-28 128.3 78 80.8
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 3.5e-28 127.9 75 84.0
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 1.3e-27 125.9 77 80.5
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 5.0e-27 124.0 76 81.6
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 8.5e-27 123.2 78 75.6
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 1.1e-26 122.9 77 75.3
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 1.5e-26 122.5 77 81.8
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 1.5e-26 122.5 77 79.2
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.5e-26 122.5 76 81.6
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.2e-26 121.3 76 80.3
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 3.2e-26 121.3 75 78.7
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 4.2e-26 120.9 78 74.4
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 4.2e-26 120.9 78 74.4
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 4.2e-26 120.9 77 76.6
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 4.2e-26 120.9 75 78.7
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 5.5e-26 120.6 78 74.4
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 7.2e-26 120.2 78 74.4
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 7.2e-26 120.2 78 73.1
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 1.2e-25 119.4 78 73.1
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.2e-25 119.4 76 78.9
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.6e-25 119.0 78 73.1
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 1.6e-25 119.0 78 73.1
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.6e-25 119.0 78 71.8
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 1.6e-25 119.0 78 75.6
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 2.7e-25 118.2 78 78.2
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 3.6e-25 117.9 78 71.8
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 4.7e-25 117.5 77 71.4
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 6.1e-25 117.1 78 73.1
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 6.1e-25 117.1 77 74.0
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 8.0e-25 116.7 78 73.1
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 8.0e-25 116.7 75 78.7
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-24 116.3 73 78.1
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 1.0e-24 116.3 78 70.5
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 1.0e-24 116.3 77 76.6
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 1.0e-24 116.3 78 74.4
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 1.4e-24 115.9 78 73.1
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 1.4e-24 115.9 78 71.8
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 2.3e-24 115.2 75 73.3
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 6.8e-24 113.6 77 75.3
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 6.8e-24 113.6 78 73.1
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 6.8e-24 113.6 77 70.1
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 8.8e-24 113.2 78 71.8
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 8.8e-24 113.2 77 74.0
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 1.2e-23 112.8 76 72.4
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 1.2e-23 112.8 77 71.4
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 2.0e-23 112.1 75 72.0
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 2.6e-23 111.7 77 72.7
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 3.4e-23 111.3 78 71.8
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 4.4e-23 110.9 77 74.0
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 4.4e-23 110.9 77 71.4
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 5.7e-23 110.5 75 74.7
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 7.5e-23 110.2 78 67.9
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 7.5e-23 110.2 77 71.4
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 1.7e-22 109.0 78 67.9
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.2e-22 108.6 77 70.1
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 3.7e-22 107.8 77 66.2
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 4.9e-22 107.5 77 64.9
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 6.3e-22 107.1 78 65.4
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 6.3e-22 107.1 78 65.4
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 8.3e-22 106.7 76 69.7
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 8.3e-22 106.7 76 69.7
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.1e-21 106.3 77 68.8
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 1.4e-21 105.9 77 68.8
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.4e-21 105.9 75 72.0
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 1.8e-21 105.5 77 68.8
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 2.4e-21 105.1 77 67.5
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.4e-21 105.1 77 67.5
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 3.1e-21 104.8 76 68.4
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 5.4e-21 104.0 75 68.0
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 5.4e-21 104.0 77 67.5
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 7.0e-21 103.6 78 66.7
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 3.8e-19 97.8 76 68.4
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.9e-18 95.5 66 68.2
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.6e-17 92.4 61 73.8
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 2.8e-17 91.7 60 73.3
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 2.8e-17 91.7 66 66.7
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 3.6e-17 91.3 69 65.2
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 6.1e-17 90.5 65 66.2
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 1.0e-16 89.7 77 54.5
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 8.3e-14 80.1 130 39.2
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 3.5e-12 74.7 77 50.6
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 4.6e-12 74.3 76 48.7
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 1.1e-10 69.7 44 72.7
TPR.G40511 Trifolium pratense HOM05D007648 ORTHO05D009613 4.3e-10 67.8 34 97.1
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.2e-09 66.2 45 68.9
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 1.2e-09 66.2 46 67.4
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 1.2e-09 66.2 46 67.4
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 1.2e-09 66.2 46 63.0
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 3.6e-09 64.7 38 78.9
MCO07G444 Micromonas commoda HOM05D007648 ORTHO05D009613 5.8e-07 57.4 72 43.1
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 7.5e-07 57.0 76 43.4
PRCOL_00002456 Prasinoderma coloniale HOM05D007648 ORTHO05D009613 9.8e-07 56.6 75 41.3


User provided reference genes

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