Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 0.0e+00 1223.4 632 100.0
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.1e-208 729.6 652 66.6
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 3.5e-203 712.2 655 64.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.0e-195 686.4 558 69.0
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.7e-171 606.3 709 53.2
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 6.0e-171 605.1 700 54.0
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.1e-170 602.1 701 53.1
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.5e-169 600.5 704 54.4
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 2.4e-156 556.6 713 52.0
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.3e-144 517.7 723 49.1
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 6.3e-144 515.4 722 49.0
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 2.0e-126 457.2 642 49.1
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.1e-124 451.4 630 48.3
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.5e-124 450.3 617 48.0
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 4.5e-118 429.5 619 48.0
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.3e-117 427.9 655 44.6
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 6.1e-115 419.1 672 45.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 5.2e-114 416.0 626 46.0
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 8.2e-112 408.7 626 46.0
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 8.2e-112 408.7 636 44.8
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 5.7e-105 386.0 674 43.5
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.8e-99 367.1 576 45.7
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 3.6e-75 287.0 728 34.5
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.7e-69 268.1 715 34.1
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 2.3e-69 267.7 707 34.1
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 3.3e-68 263.8 713 33.8
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 6.8e-66 256.1 635 35.9
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.2e-63 247.3 645 35.7
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.6e-62 243.4 629 35.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.5e-60 237.7 698 32.8
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 4.3e-60 236.9 673 34.8
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 5.3e-58 229.9 627 35.2
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 9.0e-58 229.2 677 32.6
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.2e-57 228.8 711 32.9
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 3.4e-57 227.3 628 34.2
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 3.8e-56 223.8 677 31.2
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 5.4e-55 219.9 715 31.5
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 7.1e-55 219.5 636 32.5
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.5e-52 211.8 683 30.7
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.4e-50 204.5 706 31.6
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.5e-49 201.8 702 32.2
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 4.5e-49 200.3 625 33.6
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.7e-48 198.4 688 29.7
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.7e-48 198.4 610 32.6
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 6.4e-48 196.4 525 34.1
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.4e-48 196.1 719 31.4
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.9e-47 194.9 687 29.7
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.4e-47 194.5 741 29.3
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 9.3e-47 192.6 617 33.1
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.1e-46 191.4 629 33.1
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.0e-45 189.1 627 33.2
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 8.7e-45 186.0 714 29.8
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.7e-43 180.6 654 29.1
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.1e-42 179.1 629 31.0
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.6e-41 172.9 727 27.8
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.2e-40 171.4 673 28.7
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 3.8e-40 170.6 634 31.2
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 4.3e-36 157.1 658 29.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 2.1e-35 154.8 708 29.4
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 3.7e-35 154.1 625 31.5
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 4.5e-33 147.1 457 33.9
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.3e-32 145.6 656 27.7
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.1e-31 142.5 510 30.0
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.2e-30 139.0 700 27.7
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 2.1e-30 138.3 614 29.5
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 3.9e-29 134.0 600 29.2
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 5.1e-29 133.7 286 36.4
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.5e-28 132.1 506 29.8
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 9.7e-28 129.4 610 29.2
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.3e-27 129.0 663 26.7
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.2e-27 128.3 343 32.1
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 6.3e-27 126.7 610 28.7
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 9.0e-26 122.9 301 38.5
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 9.0e-26 122.9 610 28.2
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 3.4e-25 120.9 634 28.9
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 5.9e-25 120.2 647 25.8
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.2e-24 118.2 589 28.0
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 1.4e-23 115.5 75 74.7
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 6.1e-22 110.2 637 27.5
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.3e-21 108.2 646 25.7
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 5.1e-21 107.1 508 28.0
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.1e-20 105.9 617 26.6
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 1.2e-17 95.9 534 26.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 5.9e-17 93.6 557 27.5
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 7.7e-17 93.2 626 25.1
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.3e-16 92.4 553 26.6
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.7e-16 92.0 727 25.0
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 1.4e-15 89.0 542 26.4
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.4e-15 89.0 323 30.7
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.9e-15 88.6 143 46.9
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 7.2e-15 86.7 280 31.1
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 7.2e-15 86.7 540 25.9
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 9.4e-15 86.3 469 27.9
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.7e-14 84.7 222 32.4
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 6.1e-14 83.6 567 25.0
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 3.0e-13 81.3 535 25.4
TPR.G31885 Trifolium pratense HOM05D001130 ORTHO05D013423 3.9e-13 80.9 91 54.9
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 8.8e-13 79.7 541 25.7
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 8.8e-13 79.7 559 25.8
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 2.6e-12 78.2 427 27.6
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.7e-11 75.5 567 24.3
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 2.8e-11 74.7 228 32.9
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 2.8e-11 74.7 176 38.1
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 3.7e-11 74.3 113 46.9
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.8e-10 72.0 109 48.6
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.8e-10 72.0 524 24.6
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 2.4e-10 71.6 129 42.6
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 3.1e-10 71.2 524 25.2
TPR.G35411 Trifolium pratense HOM05D000001 ORTHO05D000003 1.5e-09 68.9 109 45.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 2.0e-09 68.6 495 23.4
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 3.5e-09 67.8 123 42.3
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 3.5e-09 67.8 324 26.9
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 5.9e-09 67.0 488 25.6
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 2.9e-08 64.7 489 26.4
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 3.2e-07 61.2 511 24.1
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 3.6e-06 57.8 100 38.0


User provided reference genes

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