Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.8e-38 162.2 83 100.0
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.8e-38 162.2 83 100.0
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.8e-27 125.6 82 80.5
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 3.1e-27 124.8 83 81.9
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 7.7e-26 120.2 85 75.3
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.2e-25 118.6 86 73.3
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 5.0e-25 117.5 85 76.5
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 6.5e-25 117.1 86 74.4
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.5e-24 115.9 89 71.9
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 2.5e-24 115.2 87 73.6
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 7.2e-24 113.6 89 67.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.2e-23 112.8 86 72.1
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 1.6e-23 112.5 85 68.2
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 1.6e-23 112.5 86 69.8
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 2.1e-23 112.1 86 69.8
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 8.0e-23 110.2 83 66.3
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.0e-22 109.8 86 67.4
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.4e-22 109.4 85 67.1
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 3.0e-22 108.2 89 66.3
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 5.2e-22 107.5 84 69.0
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 8.8e-22 106.7 87 66.7
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 1.5e-21 105.9 84 67.9
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.4e-21 104.4 88 67.0
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 7.5e-21 103.6 85 65.9
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 2.8e-20 101.7 87 65.5
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.7e-20 101.3 86 65.1
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 6.3e-20 100.5 86 62.8
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 8.2e-20 100.1 85 63.5
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 8.2e-20 100.1 85 65.9
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.1e-19 99.8 85 65.9
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-19 99.4 86 64.0
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.4e-19 99.4 86 64.0
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.4e-19 99.4 87 66.7
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.4e-19 99.4 96 57.3
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 1.8e-19 99.0 83 63.9
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 2.4e-19 98.6 96 57.3
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 3.1e-19 98.2 83 66.3
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.1e-19 97.8 77 66.2
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.1e-19 97.8 77 66.2
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.3e-19 97.4 86 61.6
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 5.3e-19 97.4 90 66.7
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.0e-19 97.1 85 64.7
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 9.1e-19 96.7 74 67.6
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.6e-18 95.9 92 58.7
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 7.7e-18 93.6 87 65.5
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.9e-17 91.7 72 69.4
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.9e-17 91.7 69 69.6
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 3.8e-17 91.3 88 62.5
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 5.0e-17 90.9 88 62.5
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 6.5e-17 90.5 74 64.9
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.5e-16 89.4 84 60.7
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.9e-16 89.0 88 56.8
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 7.2e-16 87.0 80 61.2
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 7.2e-16 87.0 84 56.0
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 9.4e-16 86.7 74 67.6
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 9.4e-16 86.7 74 67.6
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 9.4e-16 86.7 74 67.6
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 9.4e-16 86.7 74 67.6
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 9.4e-16 86.7 74 67.6
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 9.4e-16 86.7 73 67.1
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.2e-15 86.3 88 53.4
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.6e-15 85.9 90 54.4
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 2.1e-15 85.5 74 58.1
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 2.7e-15 85.1 79 62.0
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 2.7e-15 85.1 79 62.0
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.7e-15 85.1 84 56.0
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 3.6e-15 84.7 96 56.2
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.0e-14 83.2 76 60.5
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.4e-14 82.8 84 57.1
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.4e-14 82.8 72 63.9
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 2.3e-14 82.0 73 64.4
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.3e-14 82.0 76 60.5
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 3.0e-14 81.6 76 60.5
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 3.0e-14 81.6 76 60.5
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 3.0e-14 81.6 76 61.8
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 4.0e-14 81.3 75 60.0
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 5.2e-14 80.9 76 60.5
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 6.8e-14 80.5 88 55.7
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 8.8e-14 80.1 87 55.2
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 8.8e-14 80.1 80 56.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.2e-13 79.7 77 58.4
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.5e-13 79.3 71 59.2
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 3.4e-13 78.2 71 60.6
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 4.4e-13 77.8 74 58.1
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 7.5e-13 77.0 75 53.3
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 7.5e-13 77.0 71 57.7
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 9.8e-13 76.6 85 57.6
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.3e-12 76.3 71 59.2
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.2e-12 75.5 88 52.3
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.8e-12 75.1 76 55.3
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 4.8e-12 74.3 72 59.7
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-11 73.2 75 54.7
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.4e-11 72.8 66 56.1
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.4e-11 72.8 74 54.1
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.4e-11 72.0 75 60.0
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 3.1e-11 71.6 96 47.9
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 5.4e-11 70.9 76 51.3
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 5.4e-11 70.9 76 51.3
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 1.2e-10 69.7 76 51.3
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 1.2e-10 69.7 76 51.3
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 7.7e-10 67.0 79 53.2
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 3.2e-08 61.6 79 49.4
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 3.6e-07 58.2 82 45.1


User provided reference genes

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