Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13423_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 6.3e-133 477.6 276 100.0
Ca_13439_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 6.3e-133 477.6 276 100.0
Medtr1g025620 Medicago truncatula HOM05D013708 ORTHO05D003197 4.3e-65 252.3 361 53.2
Medtr1g034990 Medicago truncatula HOM05D013708 ORTHO05D003197 6.2e-56 221.9 327 52.6
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 1.5e-54 217.2 447 43.4
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 2.2e-48 196.8 330 47.6
TPR.G32858 Trifolium pratense HOM05D013708 ORTHO05D003197 8.5e-45 184.9 334 47.6
Psat6g003360 Pisum sativum HOM05D013708 ORTHO05D003197 8.2e-40 168.3 198 65.7
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 2.2e-32 143.7 188 61.7
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 2.3e-26 123.6 330 40.3
Glyma.17G259300 Glycine max HOM05D013708 ORTHO05D003197 6.7e-26 122.1 126 55.6
Phvul.001G004700 Phaseolus vulgaris HOM05D013708 ORTHO05D003197 7.4e-25 118.6 197 57.9
Glyma.14G220400 Glycine max HOM05D013708 ORTHO05D003197 1.7e-24 117.5 435 28.0
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 2.6e-22 110.2 328 36.6
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 2.6e-22 110.2 329 38.3
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.0e-18 98.2 331 32.6
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 3.3e-17 93.2 326 30.4
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.1e-15 86.7 346 31.2
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.6e-14 84.3 225 31.1
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 1.6e-14 84.3 325 33.8
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.5e-14 83.2 336 31.5
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 1.0e-13 81.6 345 33.9
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 1.0e-13 81.6 342 31.9
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 1.3e-13 81.3 367 34.9
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 1.3e-13 81.3 331 30.2
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.7e-13 80.9 327 34.9
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 2.2e-13 80.5 342 31.6
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 2.9e-13 80.1 312 33.0
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 6.5e-13 79.0 355 35.5
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 8.5e-13 78.6 331 32.0
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 8.5e-13 78.6 280 39.6
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 4.2e-12 76.3 330 32.4
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 7.2e-12 75.5 350 30.9
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 9.4e-12 75.1 341 31.1
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 1.2e-11 74.7 332 30.4
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.2e-11 74.7 360 32.5
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 2.7e-11 73.6 347 36.0
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.6e-11 73.2 348 29.9
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 4.7e-11 72.8 321 34.0
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 8.0e-11 72.0 353 33.7
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 8.0e-11 72.0 331 30.8
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 8.0e-11 72.0 351 33.3
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 8.0e-11 72.0 351 30.5
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 1.4e-10 71.2 330 30.0
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 5.2e-10 69.3 172 34.3
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 5.2e-10 69.3 231 29.0
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 6.8e-10 68.9 337 30.6
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 6.8e-10 68.9 281 28.1
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 6.8e-10 68.9 333 23.7
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 8.8e-10 68.6 396 28.5
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 8.8e-10 68.6 343 27.7
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 1.2e-09 68.2 388 31.7
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 2.6e-09 67.0 267 36.0
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 4.4e-09 66.2 342 33.0
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 5.7e-09 65.9 121 37.2
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 7.5e-09 65.5 346 32.9
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 9.8e-09 65.1 213 38.0
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.3e-08 64.7 348 32.2
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 1.7e-08 64.3 342 32.5
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 2.8e-08 63.5 231 29.4
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 3.7e-08 63.2 372 30.6
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 3.7e-08 63.2 347 29.4
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.7e-08 63.2 355 31.0
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.7e-08 63.2 252 27.4
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 6.3e-08 62.4 341 32.0
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 6.3e-08 62.4 329 32.5
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 1.1e-07 61.6 296 26.7
FvH4_6g14711 Fragaria vesca HOM05D051550 ORTHO05D045480 1.1e-07 61.6 145 33.8
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 1.4e-07 61.2 201 40.8
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.4e-07 60.5 351 25.9
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 2.4e-07 60.5 309 28.2
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 2.4e-07 60.5 191 42.9
FAN14G4482 Fragaria x ananassa HOM05D051550 ORTHO05D045480 3.1e-07 60.1 145 33.1
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 3.1e-07 60.1 344 27.0
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 3.1e-07 60.1 213 32.4
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 3.1e-07 60.1 337 26.7
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 4.1e-07 59.7 341 29.3
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 4.1e-07 59.7 258 24.8
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 5.4e-07 59.3 205 39.5
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 5.4e-07 59.3 226 29.2
Potri.005G242300 Populus trichocarpa HOM05D004095 ORTHO05D003197 5.4e-07 59.3 176 29.0
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 5.4e-07 59.3 180 42.8
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.0e-07 58.9 348 31.3
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 7.0e-07 58.9 185 40.0
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 1.2e-06 58.2 381 32.5
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 1.2e-06 58.2 267 33.0
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.2e-06 58.2 336 23.2
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.6e-06 57.8 323 24.8
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.6e-06 57.8 217 31.3
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 2.0e-06 57.4 329 26.4
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 2.0e-06 57.4 193 40.9
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 2.0e-06 57.4 372 27.7
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.7e-06 57.0 322 28.0
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 3.5e-06 56.6 180 41.7
AT1G20100 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 4.5e-06 56.2 219 28.3
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.5e-06 56.2 326 26.7
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 4.5e-06 56.2 225 28.4
Carub.0002s2277 Capsella rubella HOM05D008819 ORTHO05D003197 5.9e-06 55.8 217 27.6
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 5.9e-06 55.8 209 40.2
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 5.9e-06 55.8 212 30.7
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 7.7e-06 55.5 332 24.7


User provided reference genes

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