Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 7.7e-218 760.4 434 100.0
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 8.4e-124 448.0 589 52.3
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 1.0e-121 441.0 618 51.0
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 7.2e-107 391.7 702 43.2
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 6.3e-79 298.9 642 40.5
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.3e-76 291.2 630 41.0
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 1.7e-71 274.2 630 38.9
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 6.6e-68 262.3 596 41.6
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 5.5e-67 259.2 594 38.7
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 1.4e-62 244.6 439 42.8
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 6.6e-36 156.0 231 44.6
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 5.6e-35 152.9 186 48.9
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 1.6e-34 151.4 258 38.8
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 6.2e-34 149.4 306 36.6
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.1e-33 148.7 384 33.6
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 1.5e-32 144.8 164 47.6
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 2.6e-32 144.1 191 42.9
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 1.7e-31 141.4 195 42.6
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 3.8e-31 140.2 309 36.9
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 8.4e-31 139.0 308 36.7
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 1.1e-30 138.7 237 36.7
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 1.1e-30 138.7 219 40.6
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.1e-30 138.7 411 33.3
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 9.3e-30 135.6 284 39.1
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.2e-29 135.2 292 37.3
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 1.6e-29 134.8 224 42.4
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 2.1e-29 134.4 305 34.4
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 2.7e-29 134.0 230 43.5
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 3.5e-29 133.7 296 34.8
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 4.6e-29 133.3 236 37.3
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 1.0e-28 132.1 223 39.5
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 3.9e-28 130.2 382 30.4
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 8.7e-28 129.0 302 35.4
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 4.3e-27 126.7 299 35.8
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 5.6e-27 126.3 424 30.0
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 1.3e-26 125.2 222 41.9
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.6e-26 124.8 538 28.1
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 2.1e-26 124.4 180 37.8
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 2.1e-26 124.4 173 42.2
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 2.8e-26 124.0 430 30.9
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 6.2e-26 122.9 290 32.8
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 1.1e-25 122.1 225 38.7
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 1.1e-25 122.1 405 28.9
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.1e-25 122.1 304 31.2
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 1.4e-25 121.7 222 35.1
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 1.4e-25 121.7 273 34.8
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 3.1e-25 120.6 241 44.0
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 5.3e-25 119.8 238 45.4
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 6.9e-25 119.4 380 30.5
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.6e-24 117.5 224 34.8
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 9.9e-24 115.5 400 29.5
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 1.7e-23 114.8 226 34.5
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 2.9e-23 114.0 399 30.8
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 2.9e-23 114.0 269 29.7
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.9e-23 114.0 241 35.3
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 6.4e-23 112.8 286 32.2
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 2.4e-22 110.9 251 34.7
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 5.4e-22 109.8 310 30.3
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 7.1e-22 109.4 264 32.6
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 1.2e-21 108.6 420 27.1
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 2.1e-21 107.8 243 35.0
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 3.5e-21 107.1 256 32.0
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 3.5e-21 107.1 219 38.4
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 3.5e-21 107.1 314 31.2
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 6.0e-21 106.3 289 30.1
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 6.0e-21 106.3 287 29.6
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 7.9e-21 105.9 288 30.6
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 7.9e-21 105.9 242 30.6
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 1.0e-20 105.5 276 32.6
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 2.3e-20 104.4 199 32.7
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 2.3e-20 104.4 255 36.5
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.0e-20 104.0 302 31.5
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 3.9e-20 103.6 257 32.7
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 5.1e-20 103.2 243 30.9
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 5.1e-20 103.2 163 43.6
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 6.6e-20 102.8 209 34.0
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 6.6e-20 102.8 383 28.7
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.1e-19 102.1 297 31.3
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.5e-19 101.7 409 29.3
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 2.5e-19 100.9 128 46.1
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 3.3e-19 100.5 230 31.7
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 4.3e-19 100.1 234 31.2
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 4.3e-19 100.1 338 28.4
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 5.6e-19 99.8 249 30.5
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 7.3e-19 99.4 249 30.5
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 9.6e-19 99.0 510 29.0
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 9.6e-19 99.0 416 26.4
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.6e-18 98.2 416 26.7
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 2.1e-18 97.8 274 31.8
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 2.8e-18 97.4 184 32.6
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 4.8e-18 96.7 284 29.9
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 4.8e-18 96.7 248 27.8
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 4.8e-18 96.7 354 31.1
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 1.1e-17 95.5 199 31.2
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 1.1e-17 95.5 432 27.1
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 1.4e-17 95.1 371 28.0
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 1.4e-17 95.1 390 27.4
TPR.G7025 Trifolium pratense HOM05D000472 ORTHO05D007526 1.4e-17 95.1 128 49.2
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.4e-17 95.1 383 27.9
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 1.8e-17 94.7 199 31.7
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 3.1e-17 94.0 247 35.2
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 6.9e-17 92.8 216 29.2
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 1.2e-16 92.0 214 34.6
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 5.8e-16 89.7 431 28.5
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 1.3e-15 88.6 434 26.5
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 3.8e-15 87.0 259 34.0
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 1.9e-14 84.7 183 31.7
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 3.2e-14 84.0 414 27.3
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 3.5e-13 80.5 187 32.1
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 4.6e-13 80.1 223 31.8
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 4.6e-13 80.1 484 26.0
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.0e-12 79.0 182 29.7
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 6.7e-12 76.3 432 22.9
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 6.7e-12 76.3 423 26.5
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 8.7e-12 75.9 373 24.7
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 9.6e-11 72.4 185 27.6
TPR.G20164 Trifolium pratense HOM05D006278 ORTHO05D007526 1.3e-10 72.0 68 61.8
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 2.1e-10 71.2 149 36.9
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 2.4e-09 67.8 147 31.3
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.1e-09 67.4 225 27.6
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 3.1e-09 67.4 195 27.7
Medtr1g023790 Medicago truncatula HOM05D006278 ORTHO05D007526 9.0e-09 65.9 38 78.9
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 5.8e-08 63.2 189 30.7
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 5.8e-08 63.2 187 28.3
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 1.0e-07 62.4 372 26.1
Lj1g0015234 Lotus japonicus HOM05D004242 ORTHO05D004349 2.9e-07 60.8 123 33.3
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 4.9e-07 60.1 264 26.5
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 4.9e-07 60.1 264 26.9
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 6.5e-07 59.7 117 31.6
PSO761G0055 Papaver somniferum HOM05D004242 ORTHO05D004349 6.5e-07 59.7 117 38.5
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 8.4e-07 59.3 126 32.5
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 8.4e-07 59.3 118 32.2
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 2.5e-06 57.8 111 33.3
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 3.2e-06 57.4 382 25.1
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 3.2e-06 57.4 118 29.7
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 4.2e-06 57.0 156 28.8
Lalb_Chr15g0076401 Lupinus albus HOM05D004242 ORTHO05D004349 5.5e-06 56.6 117 33.3
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 7.1e-06 56.2 121 32.2
arahy.Tifrunner.gnm1.ann1.YBIH8U Arachis hypogaea HOM05D004242 ORTHO05D004349 9.3e-06 55.8 110 34.5
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 9.3e-06 55.8 147 28.6


User provided reference genes

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