Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 1.6e-252 875.5 436 100.0
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 3.2e-208 728.4 439 81.8
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 4.5e-202 708.0 438 80.4
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 9.5e-200 700.3 434 79.7
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 9.8e-189 663.7 437 75.3
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 2.3e-182 642.5 430 72.6
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 2.2e-172 609.4 432 70.6
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 4.4e-165 585.1 433 70.4
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 2.1e-151 539.7 433 66.5
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 6.4e-148 528.1 385 69.9
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.3e-143 513.8 360 76.1
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 2.1e-138 496.5 440 58.9
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 6.0e-138 495.0 436 58.3
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 7.9e-138 494.6 431 58.5
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 3.0e-137 492.7 431 58.2
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 5.1e-137 491.9 437 57.2
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 2.5e-136 489.6 429 59.2
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 4.3e-136 488.8 431 57.8
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 7.4e-136 488.0 437 58.4
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 3.1e-134 482.6 432 58.1
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 6.9e-134 481.5 423 57.7
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.2e-133 480.7 444 56.8
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 2.0e-133 479.9 435 57.5
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 2.0e-133 479.9 429 57.1
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 7.6e-133 478.0 441 55.1
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 7.6e-133 478.0 439 56.9
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 1.0e-132 477.6 436 55.7
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 1.3e-132 477.2 439 55.6
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 8.4e-132 474.6 439 56.0
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.1e-131 474.2 433 57.7
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.5e-131 473.0 445 55.3
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 2.5e-131 473.0 431 56.8
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 9.3e-131 471.1 440 58.4
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 1.2e-130 470.7 430 57.2
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 1.3e-129 467.2 428 53.7
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 3.0e-129 466.1 440 57.5
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.7e-129 464.9 438 56.6
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 9.7e-128 461.1 430 58.4
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 2.8e-127 459.5 437 58.1
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 8.2e-127 458.0 435 54.5
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 3.1e-126 456.1 431 55.5
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 3.1e-126 456.1 441 55.8
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 2.0e-125 453.4 430 54.4
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 3.4e-125 452.6 436 53.4
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 4.5e-125 452.2 437 54.0
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 7.7e-125 451.4 436 55.0
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.7e-124 450.3 434 56.0
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.9e-124 449.5 554 46.4
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 5.0e-124 448.7 438 53.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.4e-123 447.2 475 52.0
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 3.2e-123 446.0 433 52.7
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.2e-123 445.7 437 54.9
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 7.2e-123 444.9 442 53.6
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.2e-122 444.1 435 52.0
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 1.6e-122 443.7 433 52.4
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 2.1e-122 443.4 441 54.9
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 7.9e-122 441.4 433 51.7
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.4e-121 440.7 433 55.7
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.8e-121 440.3 433 52.2
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 3.0e-121 439.5 437 51.7
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.9e-121 439.1 449 50.8
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.1e-120 437.6 424 55.7
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.5e-120 437.2 448 50.0
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 1.1e-118 431.0 436 51.6
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 1.1e-118 431.0 443 51.0
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 3.1e-118 429.5 495 49.9
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 4.1e-118 429.1 438 53.4
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.9e-118 428.3 457 50.1
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.9e-118 428.3 457 50.1
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 1.2e-117 427.6 436 53.7
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.7e-116 423.7 441 49.7
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.7e-116 423.7 432 51.2
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 2.2e-116 423.3 436 51.8
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.4e-115 420.6 434 50.5
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 3.6e-114 416.0 337 62.6
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.4e-110 403.3 390 55.6
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 4.1e-110 402.5 449 50.6
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 3.9e-105 386.0 431 47.8
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.1e-104 384.4 391 52.2
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.6e-104 383.3 384 52.9
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 3.3e-104 382.9 340 56.2
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.2e-103 380.2 457 48.6
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 9.4e-99 364.8 449 47.0
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 6.1e-98 362.1 439 45.3
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 4.0e-97 359.4 416 45.2
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 4.4e-96 355.9 449 45.2
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 4.7e-90 335.9 388 47.9
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 6.1e-90 335.5 365 49.9
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 8.8e-89 331.6 456 41.7
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 2.6e-88 330.1 346 50.9
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.6e-82 309.7 444 42.6
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.2e-79 300.4 406 42.4
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.6e-77 294.3 356 48.6
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.5e-75 287.0 438 39.0
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 5.2e-73 279.3 306 45.8
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 7.3e-67 258.8 371 42.3
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.7e-61 240.4 369 40.4
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 8.6e-60 235.3 161 67.7
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 5.2e-57 226.1 305 43.0
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 3.0e-52 210.3 192 50.5
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 2.4e-49 200.7 448 29.0
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 9.3e-46 188.7 244 48.4
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 2.5e-35 154.1 245 37.1
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 5.6e-35 152.9 247 38.9
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 6.2e-34 149.4 86 80.2
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.3e-25 119.8 160 47.5
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.4e-17 95.1 165 38.8
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 2.2e-15 87.8 67 56.7
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.9e-15 87.4 215 27.9
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 1.1e-09 68.9 97 54.6
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.1e-09 68.9 174 33.3
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 6.5e-07 59.7 48 62.5


User provided reference genes

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