Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13330_v3 Cicer arietinum L. HOM05D001637 ORTHO05D000175 3.7e-85 318.2 158 100.0
Medtr1g021730 Medicago truncatula HOM05D001637 ORTHO05D000175 1.0e-74 283.5 157 86.6
Lj5g0017977 Lotus japonicus HOM05D001637 ORTHO05D000175 4.8e-69 264.6 159 80.5
TPR.G15733 Trifolium pratense HOM05D001637 ORTHO05D000175 8.2e-69 263.8 157 81.5
Phvul.001G017200 Phaseolus vulgaris HOM05D001637 ORTHO05D000175 9.1e-68 260.4 160 78.8
VMungo0647G1468 Vigna mungo HOM05D001637 ORTHO05D000175 5.0e-66 254.6 160 76.9
Lalb_Chr14g0369001 Lupinus albus HOM05D001637 ORTHO05D000175 2.6e-59 232.3 159 69.8
Cfa018450 Carpinus fangiana HOM05D000909 ORTHO05D000928 5.2e-55 218.0 158 63.3
Thecc.08G020900 Theobroma cacao HOM05D001637 ORTHO05D000175 9.7e-54 213.8 147 68.0
QL02p007245 Quercus lobata HOM05D001637 ORTHO05D000175 9.1e-52 207.2 157 63.1
Duzib093G0105 Durio zibethinus HOM05D001637 ORTHO05D000175 1.2e-51 206.8 147 64.6
COL.COLO4_26385 Corchorus olitorius HOM05D000909 ORTHO05D000928 2.0e-51 206.1 147 65.3
Gohir.D05G200400 Gossypium hirsutum HOM05D001637 ORTHO05D000175 2.7e-51 205.7 147 63.9
Atru.chr13.559 Acer truncatum HOM05D001637 ORTHO05D000175 3.5e-51 205.3 159 63.5
Gorai.009G205700 Gossypium raimondii HOM05D001637 ORTHO05D000175 5.9e-51 204.5 147 63.3
Gohir.D06G010000 Gossypium hirsutum HOM05D001637 ORTHO05D000175 3.8e-50 201.8 152 60.5
Dinv39372 Davidia involucrata HOM05D001637 ORTHO05D000175 5.0e-50 201.4 147 61.2
Gorai.010G012900 Gossypium raimondii HOM05D001637 ORTHO05D000175 6.5e-50 201.1 152 59.9
Gohir.A06G012600 Gossypium hirsutum HOM05D001637 ORTHO05D000175 1.1e-49 200.3 148 61.5
Atru.BG.236.p Acer truncatum HOM05D001637 ORTHO05D000175 1.5e-49 199.9 146 66.4
Actinidia15291 Actinidia chinensis HOM05D000296 ORTHO05D000175 1.5e-49 199.9 156 58.3
Sabra14G0029000 Salix brachista HOM05D001637 ORTHO05D000175 3.2e-49 198.7 157 60.5
Lj7A420T22 Lonicera japonica HOM05D001637 ORTHO05D000175 4.2e-49 198.4 158 57.6
Migut.C00674 Erythranthe guttata HOM05D001637 ORTHO05D000175 5.5e-49 198.0 147 61.9
Haze_17616 Corylus avellana HOM05D001637 ORTHO05D000175 9.4e-49 197.2 164 59.1
Gohir.A05G197400 Gossypium hirsutum HOM05D001637 ORTHO05D000175 1.2e-48 196.8 147 63.9
Ciclev10003465m.g Citrus clementina HOM05D001637 ORTHO05D000175 2.1e-48 196.1 144 63.2
Manes.05G164300 Manihot esculenta HOM05D001637 ORTHO05D000175 2.1e-48 196.1 150 62.0
vmacro21604 Vaccinium macrocarpon HOM05D001637 ORTHO05D000175 2.1e-48 196.1 147 61.9
BcaC08g42955 Brassica carinata HOM05D003421 ORTHO05D003268 2.7e-48 195.7 163 55.8
C06p01960 Brassica napus HOM05D000296 ORTHO05D000175 2.7e-48 195.7 163 55.8
BolC6t35327H Brassica oleracea HOM05D000296 ORTHO05D000175 2.7e-48 195.7 163 55.8
AL1G53750 Arabidopsis lyrata HOM05D001637 ORTHO05D000175 3.6e-48 195.3 147 59.9
RcHm_v2.0_Chr6g0300331 Rosa chinensis HOM05D001637 ORTHO05D000175 3.6e-48 195.3 148 60.8
CSS0038874 Camellia sinensis var. sinensis HOM05D000296 ORTHO05D000175 4.7e-48 194.9 144 61.8
TWI56G1069 Tripterygium wilfordii HOM05D000296 ORTHO05D000175 6.1e-48 194.5 149 62.4
Potri.014G039800 Populus trichocarpa HOM05D000296 ORTHO05D000175 1.4e-47 193.4 157 58.6
Sc02g0006610 Simmondsia chinensis HOM05D001637 ORTHO05D000175 1.4e-47 193.4 146 58.2
A10p06330 Brassica napus HOM05D000296 ORTHO05D000175 1.8e-47 193.0 163 54.6
BraA10t42901Z Brassica rapa HOM05D000296 ORTHO05D000175 1.8e-47 193.0 163 54.6
Sp1g34540 Schrenkiella parvula HOM05D000296 ORTHO05D000175 1.8e-47 193.0 147 59.9
CARHR037080 Cardamine hirsuta HOM05D000296 ORTHO05D000175 4.0e-47 191.8 146 59.6
Prupe.1G384600 Prunus persica HOM05D001637 ORTHO05D000175 4.0e-47 191.8 152 56.6
PGR031G2186 Punica granatum HOM05D000296 ORTHO05D000175 6.8e-47 191.0 147 57.8
GSVIVG01009632001 Vitis vinifera HOM05D001637 ORTHO05D000175 8.8e-47 190.7 148 59.5
Eucgr.A00482 Eucalyptus grandis HOM05D001637 ORTHO05D000175 1.2e-46 190.3 154 57.1
AT1G47510 Arabidopsis thaliana HOM05D000296 ORTHO05D000175 1.5e-46 189.9 147 58.5
Solyc04g079820.3 Solanum lycopersicum HOM05D001637 ORTHO05D000175 1.5e-46 189.9 157 54.1
THA.LOC104813202 Tarenaya hassleriana HOM05D001637 ORTHO05D000175 1.5e-46 189.9 149 57.7
Nn1g05124 Nelumbo nucifera HOM05D001637 ORTHO05D000175 2.0e-46 189.5 146 61.0
Psat6g010880 Pisum sativum HOM05D001637 ORTHO05D000175 2.6e-46 189.1 105 87.6
PGSC0003DMG400016891 Solanum tuberosum HOM05D001637 ORTHO05D000175 2.6e-46 189.1 147 57.1
MD08G1037300 Malus domestica HOM05D001637 ORTHO05D000175 3.4e-46 188.7 163 54.6
Sopen04g033390 Solanum pennellii HOM05D001637 ORTHO05D000175 3.4e-46 188.7 147 56.5
Carub.0001s3628 Capsella rubella HOM05D001637 ORTHO05D000175 5.7e-46 188.0 146 58.2
Rhsim06G0037700 Rhododendron simsii HOM05D001637 ORTHO05D000175 5.7e-46 188.0 156 57.7
Os03g0626500 Oryza sativa ssp. japonica HOM05D000296 ORTHO05D000175 7.5e-46 187.6 147 56.5
TAR381G0530 Trochodendron aralioides HOM05D000296 ORTHO05D000175 9.8e-46 187.2 149 57.7
MSTRG.25134 Avicennia marina HOM05D001637 ORTHO05D000175 1.7e-45 186.4 153 55.6
CiPaw.16G053100 Carya illinoinensis HOM05D001637 ORTHO05D000175 1.7e-45 186.4 149 62.4
Cc10_g03490 Coffea canephora HOM05D001637 ORTHO05D000175 1.7e-45 186.4 147 54.4
Thhalv10011683m.g Eutrema salsugineum HOM05D001637 ORTHO05D000175 1.7e-45 186.4 144 59.0
Zm00001eb051200 Zea mays HOM05D001637 ORTHO05D000175 3.1e-44 182.2 147 55.8
Glyma.14G077900 Glycine max HOM05D001637 ORTHO05D000175 7.7e-43 177.6 108 82.4
arahy.Tifrunner.gnm1.ann1.LW4QVS Arachis hypogaea HOM05D001637 ORTHO05D000175 1.1e-41 173.7 158 56.3
arahy.Tifrunner.gnm1.ann1.NH00NZ Arachis hypogaea HOM05D001637 ORTHO05D000175 1.1e-41 173.7 158 56.3
Nitab4.5_0000110g0080 Nicotiana tabacum HOM05D001637 ORTHO05D000175 9.5e-41 170.6 137 56.2
ATR0733G044 Amborella trichopoda HOM05D000296 ORTHO05D000175 2.7e-40 169.1 145 56.6
Aqoxy6G00997 Aquilegia oxysepala HOM05D000296 ORTHO05D000175 6.1e-40 167.9 149 53.7
CANSAT25G3245 Cannabis sativa HOM05D001637 ORTHO05D000175 4.0e-39 165.2 161 50.3
Aqoxy6G00994 Aquilegia oxysepala HOM05D000296 ORTHO05D000175 8.8e-39 164.1 149 53.7
FvH4_2g40410 Fragaria vesca HOM05D000296 ORTHO05D000175 7.5e-38 161.0 147 51.7
RcHm_v2.0_Chr2g0154391 Rosa chinensis HOM05D001637 ORTHO05D000175 7.5e-38 161.0 127 59.1
Peaxi162Scf02754g00016 Petunia axillaris HOM05D001637 ORTHO05D000175 2.8e-37 159.1 130 53.8
Glyma.17G247600 Glycine max HOM05D001637 ORTHO05D000175 4.1e-36 155.2 159 56.0
FAN20G0981 Fragaria x ananassa HOM05D001637 ORTHO05D000175 4.5e-35 151.8 172 45.3
FAN27G2354 Fragaria x ananassa HOM05D001637 ORTHO05D000175 1.7e-34 149.8 170 45.3
PSO675G7254 Papaver somniferum HOM05D000296 ORTHO05D000175 6.6e-34 147.9 157 51.6
Sed0006601 Sechium edule HOM05D000296 ORTHO05D000175 1.6e-32 143.3 154 51.3
PSO541G2553 Papaver somniferum HOM05D000296 ORTHO05D000175 5.2e-31 138.3 157 49.7
Nitab4.5_0011041g0010 Nicotiana tabacum HOM05D001637 ORTHO05D000175 6.6e-26 121.3 147 44.9
MBI16_g13155_MAGBIO Magnolia biondii HOM05D000296 ORTHO05D000175 3.3e-25 119.0 152 44.7
Mapoly0028s0139 Marchantia polymorpha HOM05D000296 ORTHO05D000175 2.1e-24 116.3 130 44.6
SMO271G0172 Selaginella moellendorffii HOM05D000296 ORTHO05D000175 6.8e-23 111.3 130 40.8
SEGI_23867 Sequoiadendron giganteum HOM05D000296 ORTHO05D000175 1.2e-22 110.5 130 40.0
Pp3c21_20640 Physcomitrium patens HOM05D000296 ORTHO05D000175 8.3e-21 104.4 133 42.1
Pp3c18_1400 Physcomitrium patens HOM05D000296 ORTHO05D000175 3.2e-20 102.4 133 42.9
Oeu019095.1 Olea europaea HOM05D001637 ORTHO05D000175 8.6e-18 94.4 63 65.1
SMO111G0096 Selaginella moellendorffii HOM05D000296 ORTHO05D000175 9.5e-17 90.9 133 37.6
SEGI_08196 Sequoiadendron giganteum HOM05D000296 ORTHO05D000175 3.7e-13 79.0 94 42.6
VMungo1080G0081 Vigna mungo HOM05D045226 ORTHO05D000175 3.9e-10 68.9 44 61.4
VMungo0384G0001 Vigna mungo HOM05D003914 ORTHO05D001189 5.1e-10 68.6 44 61.4
COL.COLO4_21699 Corchorus olitorius HOM05D001637 ORTHO05D000175 5.6e-09 65.1 47 63.8
SMO340G0051 Selaginella moellendorffii HOM05D000296 ORTHO05D000175 2.8e-08 62.8 72 41.7


User provided reference genes

Program Settings