Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 5.0e-35 150.6 78 100.0
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.3e-30 136.0 78 89.7
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 1.8e-29 132.1 78 87.2
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.2e-28 129.4 78 85.9
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.3e-27 125.9 78 85.9
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 2.3e-24 115.2 78 80.8
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.2e-23 112.8 78 79.5
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 4.4e-23 110.9 75 77.3
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 4.4e-23 110.9 79 77.2
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 2.8e-22 108.2 79 74.7
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 4.9e-22 107.5 73 78.1
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 1.1e-21 106.3 75 74.7
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 3.1e-21 104.8 79 74.7
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 5.4e-21 104.0 75 76.0
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 5.4e-21 104.0 78 69.2
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 5.4e-21 104.0 78 69.2
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 9.1e-21 103.2 74 78.4
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.6e-20 102.4 78 71.8
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.6e-20 102.4 78 71.8
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.0e-20 102.1 75 72.0
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 7.7e-20 100.1 74 75.7
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.3e-19 99.4 74 75.7
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.3e-19 99.4 78 69.2
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 1.7e-19 99.0 74 74.3
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 5.0e-19 97.4 75 70.7
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 5.0e-19 97.4 74 71.6
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 6.6e-19 97.1 75 68.0
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.1e-18 96.3 76 72.4
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.3e-18 94.7 75 72.0
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 3.3e-18 94.7 70 72.9
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 4.2e-18 94.4 75 72.0
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 4.2e-18 94.4 74 71.6
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 9.5e-18 93.2 78 66.7
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.2e-17 92.8 75 69.3
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 1.2e-17 92.8 76 68.4
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 2.8e-17 91.7 75 66.7
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 3.6e-17 91.3 73 68.5
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 3.6e-17 91.3 75 68.0
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 6.1e-17 90.5 76 67.1
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 8.0e-17 90.1 73 68.5
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 1.0e-16 89.7 78 65.4
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 2.3e-16 88.6 78 64.1
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 3.0e-16 88.2 78 64.1
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 4.0e-16 87.8 73 65.8
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 6.8e-16 87.0 79 60.8
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 1.2e-15 86.3 73 64.4
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.2e-15 86.3 75 65.3
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 2.6e-15 85.1 86 59.3
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 3.4e-15 84.7 73 64.4
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.7e-15 84.0 89 56.2
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 5.7e-15 84.0 82 61.0
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 1.7e-14 82.4 77 63.6
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 2.2e-14 82.0 77 61.0
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 6.3e-14 80.5 73 61.6
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 1.4e-13 79.3 74 64.9
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 3.2e-13 78.2 73 61.6
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 4.1e-13 77.8 73 58.9
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 4.1e-13 77.8 70 62.9
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 4.1e-13 77.8 70 62.9
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 7.0e-13 77.0 73 63.0
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 9.2e-13 76.6 70 62.9
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 9.2e-13 76.6 70 62.9
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 9.2e-13 76.6 75 57.3
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 1.6e-12 75.9 73 61.6
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 2.7e-12 75.1 77 58.4
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 2.7e-12 75.1 83 57.8
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 2.7e-12 75.1 70 60.0
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 5.9e-12 73.9 73 57.5
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 7.8e-12 73.6 73 58.9
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 1.3e-11 72.8 100 50.0
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 2.3e-11 72.0 88 52.3
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 2.9e-11 71.6 73 60.3
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 5.0e-11 70.9 73 54.8
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 5.0e-11 70.9 78 59.0
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 8.6e-11 70.1 72 58.3
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 4.3e-10 67.8 75 57.3
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 7.3e-10 67.0 90 50.0
Glyma.04G045900 Glycine max HOM05D015670 ORTHO05D009588 9.5e-10 66.6 73 54.8
Phvul.001G027900 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 9.5e-10 66.6 74 56.8
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.8e-09 65.1 86 51.2
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.4e-08 62.8 67 58.2
Lalb_Chr23g0267531 Lupinus albus HOM05D015670 ORTHO05D009588 4.0e-08 61.2 33 87.9
Phvul.009G071900 Phaseolus vulgaris HOM05D015670 ORTHO05D009588 8.9e-08 60.1 33 84.8
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 3.4e-07 58.2 78 43.6
Psat5g038880 Pisum sativum HOM05D015670 ORTHO05D009588 9.8e-07 56.6 73 49.3
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 9.8e-07 56.6 79 50.6
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 1.3e-06 56.2 70 54.3
Lalb_Chr08g0245551 Lupinus albus HOM05D015670 ORTHO05D009588 4.9e-06 54.3 28 85.7
Lalb_Chr11g0062881 Lupinus albus HOM05D015670 ORTHO05D009588 4.9e-06 54.3 28 85.7


User provided reference genes

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