Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 9.4e-192 673.3 332 100.0
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.4e-147 525.8 337 79.5
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 7.1e-139 497.7 330 77.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.4e-134 483.4 330 73.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 6.9e-126 454.5 339 69.6
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.7e-124 449.9 323 70.3
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.8e-121 439.9 341 65.7
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 3.2e-115 419.1 325 64.3
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.8e-111 406.0 332 63.3
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.1e-110 402.1 342 61.1
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 2.5e-107 392.9 339 59.3
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 9.3e-107 391.0 335 59.4
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 2.7e-106 389.4 331 59.8
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 6.7e-105 384.8 343 58.9
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 8.7e-105 384.4 345 58.6
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.9e-104 383.3 341 58.1
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.9e-104 383.3 293 64.2
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.3e-104 382.5 336 60.1
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 3.3e-104 382.5 344 58.1
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.3e-104 382.1 333 60.1
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 9.7e-104 380.9 347 57.6
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.3e-103 380.6 345 58.0
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.3e-103 380.6 344 59.0
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.3e-103 380.6 340 58.2
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 6.3e-103 378.3 340 59.4
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 8.2e-103 377.9 344 57.6
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 5.3e-102 375.2 342 57.6
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.5e-101 373.6 340 57.4
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.6e-101 372.9 354 56.8
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.7e-100 370.2 344 56.1
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.4e-99 367.1 339 56.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.5e-99 366.3 345 56.8
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 2.5e-99 366.3 346 57.5
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 3.2e-99 365.9 345 56.5
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.1e-98 363.2 348 56.9
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 3.6e-98 362.5 346 55.5
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 6.1e-98 361.7 341 55.7
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.9e-97 359.0 346 54.9
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.1e-96 357.5 345 55.1
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.4e-96 354.8 347 55.0
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 2.8e-95 352.8 339 53.4
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.7e-95 352.4 357 53.2
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 8.2e-95 351.3 345 54.5
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.4e-94 350.5 381 51.2
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.8e-94 350.1 348 55.7
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 6.9e-94 348.2 341 55.4
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 6.9e-94 348.2 340 54.7
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.0e-93 346.7 343 54.2
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 2.6e-93 346.3 333 53.8
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 5.9e-93 345.1 327 55.7
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 8.5e-92 341.3 339 53.4
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.4e-91 340.5 325 56.0
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.9e-91 340.1 304 57.6
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 2.5e-91 339.7 337 55.8
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 2.1e-90 336.7 331 53.2
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 4.7e-90 335.5 343 53.1
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 4.7e-90 335.5 330 52.7
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.0e-89 334.3 334 53.0
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.0e-89 334.3 297 58.9
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.8e-89 333.6 339 52.5
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 3.9e-89 332.4 341 54.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 3.9e-89 332.4 333 55.0
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 2.0e-88 330.1 340 52.9
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 2.6e-88 329.7 334 52.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 2.6e-88 329.7 347 53.3
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 3.3e-88 329.3 339 51.9
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 5.7e-88 328.6 334 53.0
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 5.7e-88 328.6 338 53.0
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 2.8e-87 326.2 338 53.0
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.4e-86 323.9 338 52.7
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 5.3e-86 322.0 338 52.4
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 7.0e-86 321.6 325 52.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 5.9e-85 318.5 279 63.4
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.9e-84 316.2 427 44.3
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.9e-84 316.2 352 50.9
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 4.2e-83 312.4 328 51.2
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 3.0e-81 306.2 276 58.0
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.0e-81 305.8 276 57.6
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 5.7e-80 302.0 332 50.0
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 7.5e-80 301.6 346 49.1
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 7.0e-78 295.0 333 49.2
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.6e-77 293.9 268 57.5
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.0e-77 293.5 339 50.1
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 4.5e-77 292.4 271 54.6
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.9e-75 287.0 354 44.9
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 3.2e-75 286.2 352 45.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.1e-74 283.5 314 46.2
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 4.7e-74 282.3 210 66.2
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 2.8e-71 273.1 310 48.1
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 3.7e-71 272.7 357 44.5
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 7.0e-70 268.5 210 62.4
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 2.9e-60 236.5 220 56.8
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 7.5e-48 195.3 261 44.8
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.4e-46 190.3 185 56.8
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 5.4e-46 189.1 282 35.1
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 5.6e-35 152.5 248 34.7
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.8e-33 147.5 121 67.8
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 2.4e-33 147.1 159 47.2
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 6.8e-33 145.6 172 47.7
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.2e-32 144.8 127 58.3
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.7e-31 141.0 187 40.6
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 3.8e-31 139.8 128 58.6
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 3.5e-29 133.3 198 40.9
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.1e-25 121.7 114 57.9
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 5.3e-25 119.4 125 54.4
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 5.8e-24 115.9 173 39.9
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.3e-23 114.8 146 46.6
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.4e-22 111.3 153 39.9
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 3.5e-21 106.7 93 59.1
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 3.2e-14 83.6 74 55.4
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 5.4e-14 82.8 83 44.6
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 7.4e-11 72.4 70 54.3
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 1.1e-09 68.6 72 52.8
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.2e-07 60.8 37 73.0


User provided reference genes

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