Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.4e-284 982.2 473 100.0
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.1e-233 813.1 479 82.3
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 3.2e-225 785.0 472 81.6
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.7e-218 762.7 476 78.8
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.1e-192 676.0 477 72.3
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.6e-179 632.5 480 66.5
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 3.6e-176 622.1 463 67.0
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 1.2e-171 607.1 475 65.5
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 8.5e-170 600.9 455 66.4
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 3.3e-166 589.0 452 66.2
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 3.7e-165 585.5 482 62.2
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 3.8e-162 575.5 480 62.3
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.6e-160 570.1 479 60.5
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 3.1e-156 555.8 478 61.1
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 5.3e-156 555.1 471 61.1
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.2e-155 553.9 481 59.7
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.9e-154 549.3 472 59.3
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.1e-153 547.4 472 59.3
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.2e-152 543.9 491 59.3
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 6.7e-151 538.1 433 63.3
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 2.6e-150 536.2 472 56.1
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 5.7e-150 535.0 471 59.7
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 5.7e-150 535.0 478 58.8
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.7e-150 535.0 447 61.5
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.3e-149 531.6 472 58.1
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-148 530.8 472 57.8
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.4e-148 530.4 467 58.5
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 9.1e-148 527.7 491 57.8
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.7e-146 523.5 491 57.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 3.2e-145 519.2 474 58.4
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 6.8e-143 511.5 487 55.9
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.2e-142 510.8 480 57.3
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.0e-142 510.0 480 57.7
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 5.7e-142 508.4 478 56.3
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.7e-141 506.9 488 55.3
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.3e-141 505.0 481 55.7
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.0e-138 497.7 468 56.4
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 9.5e-137 491.1 481 53.2
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 3.6e-136 489.2 478 55.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 8.0e-136 488.0 473 54.8
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 1.4e-135 487.3 476 54.4
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.4e-135 487.3 485 54.4
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.3e-135 486.5 460 55.2
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 3.0e-135 486.1 473 54.3
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 3.0e-135 486.1 467 55.2
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 5.2e-135 485.3 471 55.0
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 5.2e-135 485.3 479 53.9
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 8.9e-135 484.6 466 54.3
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 8.9e-135 484.6 474 53.4
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.2e-134 484.2 462 54.8
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 4.4e-134 482.3 471 55.6
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.3e-133 480.7 476 52.1
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.7e-133 480.3 474 53.0
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 2.2e-133 479.9 454 54.4
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 2.2e-133 479.9 454 54.4
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 3.1e-132 476.1 478 54.0
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.2e-131 474.2 478 53.6
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.6e-131 473.8 459 54.7
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.0e-131 473.4 473 52.4
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.0e-131 473.4 477 53.5
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.9e-130 469.5 477 53.7
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.3e-129 466.1 460 53.5
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.6e-128 463.8 460 53.0
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.8e-128 463.0 469 52.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.7e-128 462.2 460 52.8
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.4e-127 460.7 460 52.8
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 8.9e-127 458.0 472 51.3
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.9e-127 458.0 460 53.0
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.8e-124 450.3 465 52.0
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.8e-124 450.3 469 53.3
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.0e-122 444.5 464 51.5
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 6.6e-122 441.8 464 52.8
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 8.0e-120 434.9 450 49.1
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.1e-113 414.5 478 48.5
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.9e-113 413.7 452 49.3
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 4.3e-113 412.5 464 49.1
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 7.5e-110 401.7 452 48.2
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 2.2e-109 400.2 453 48.6
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 6.4e-109 398.7 452 47.6
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 3.5e-107 392.9 456 47.8
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 3.0e-106 389.8 472 45.8
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 5.6e-105 385.6 448 46.2
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 8.1e-104 381.7 453 47.7
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 8.1e-104 381.7 417 49.6
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-103 381.3 445 48.8
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.8e-103 380.6 458 46.1
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.8e-103 380.6 458 46.1
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.3e-101 374.4 522 42.9
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 3.8e-101 372.9 454 45.6
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.1e-100 371.3 449 45.2
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 1.9e-100 370.5 458 45.9
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 7.1e-100 368.6 456 43.2
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.0e-98 364.8 453 43.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 6.6e-98 362.1 464 42.5
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 3.3e-97 359.8 300 62.7
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 2.8e-96 356.7 332 56.0
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 7.8e-91 338.6 458 43.0
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.1e-89 334.7 349 51.6
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 7.3e-89 332.0 458 42.6
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 7.6e-78 295.4 323 51.1
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 3.7e-72 276.6 288 52.1
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.3e-69 268.1 297 51.2
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 8.7e-66 255.4 504 33.7
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.2e-59 235.0 249 51.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.6e-59 233.0 330 43.3
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.7e-53 214.5 452 33.6
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 6.7e-50 202.6 539 30.1
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 8.2e-48 195.7 229 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 8.5e-45 185.7 357 33.6
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.4e-42 178.3 164 54.3
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 1.6e-35 154.8 555 23.8
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 9.7e-33 145.6 188 47.3
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 5.9e-30 136.3 149 44.3
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.5e-28 131.7 99 62.6
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.5e-28 131.0 99 59.6
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 2.6e-25 120.9 134 47.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.0e-21 109.0 105 51.4
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 2.3e-21 107.8 297 31.0
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 7.2e-20 102.8 119 45.4
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.2e-19 102.1 88 61.4
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 3.6e-19 100.5 83 66.3
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.7e-16 90.5 65 61.5
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.8e-15 88.2 179 31.3
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.7e-13 81.6 95 47.4
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 4.4e-09 67.0 119 42.0


User provided reference genes

Program Settings