Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 9.2e-60 233.4 122 100.0
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.2e-46 189.9 118 83.1
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.1e-44 183.3 123 81.3
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.6e-43 179.5 122 80.3
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 9.5e-41 170.2 112 79.5
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 1.6e-40 169.5 129 73.6
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 3.1e-39 165.2 122 75.4
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 2.0e-38 162.5 123 73.2
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 2.2e-37 159.1 122 73.8
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 4.9e-37 157.9 122 73.8
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 6.4e-37 157.5 118 69.5
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.4e-36 155.6 118 68.6
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 3.5e-35 151.8 109 72.5
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 9.6e-33 143.7 124 67.7
Ca_10674_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.4e-31 139.8 122 70.5
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 3.4e-30 135.2 99 67.7
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 4.4e-30 134.8 97 69.1
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 4.4e-30 134.8 99 66.7
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 4.4e-30 134.8 101 67.3
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 7.6e-30 134.0 104 67.3
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 4.9e-29 131.3 97 69.1
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.1e-28 130.2 97 69.1
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.4e-28 129.8 97 69.1
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.4e-28 129.0 93 67.7
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 3.2e-28 128.6 99 67.7
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 9.3e-28 127.1 99 62.6
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 9.3e-28 127.1 101 62.4
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 2.3e-26 122.5 98 62.2
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 5.1e-26 121.3 111 60.4
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 6.6e-26 120.9 101 62.4
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 8.7e-26 120.6 99 60.6
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 8.7e-26 120.6 102 61.8
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.5e-25 119.8 101 60.4
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 4.3e-25 118.2 104 60.6
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 7.3e-25 117.5 115 52.2
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 9.6e-25 117.1 102 56.9
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 9.6e-25 117.1 104 61.5
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.3e-24 116.7 104 57.7
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 2.8e-24 115.5 103 62.1
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.8e-24 115.5 103 62.1
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.8e-24 115.5 102 57.8
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.8e-24 115.5 102 56.9
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 2.8e-24 115.5 102 56.9
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 3.6e-24 115.2 102 58.8
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.6e-24 115.2 110 59.1
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 4.8e-24 114.8 102 57.8
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 4.8e-24 114.8 97 61.9
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 4.8e-24 114.8 76 69.7
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 6.2e-24 114.4 98 56.1
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 8.1e-24 114.0 93 61.3
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 8.1e-24 114.0 80 71.2
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 8.1e-24 114.0 100 58.0
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.1e-23 113.6 103 61.2
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 1.4e-23 113.2 93 61.3
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 1.4e-23 113.2 103 56.3
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.4e-23 113.2 115 55.7
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.4e-23 113.2 101 57.4
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 1.4e-23 113.2 122 54.9
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 1.4e-23 113.2 95 61.1
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.8e-23 112.8 103 59.2
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 2.4e-23 112.5 122 52.5
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 2.4e-23 112.5 104 55.8
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 4.0e-23 111.7 84 60.7
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 4.0e-23 111.7 99 56.6
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.0e-23 111.7 97 56.7
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 6.9e-23 110.9 101 57.4
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 9.0e-23 110.5 84 59.5
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 9.0e-23 110.5 101 58.4
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 9.0e-23 110.5 116 52.6
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.5e-22 109.8 108 52.8
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.5e-22 109.8 101 56.4
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.5e-22 109.8 102 59.8
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 2.0e-22 109.4 97 54.6
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.0e-22 109.4 81 64.2
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.6e-22 109.0 101 56.4
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 3.4e-22 108.6 112 49.1
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 3.4e-22 108.6 94 57.4
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 4.4e-22 108.2 114 52.6
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.4e-22 108.2 96 53.1
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 5.8e-22 107.8 108 52.8
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 5.8e-22 107.8 98 55.1
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 5.8e-22 107.8 102 57.8
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 9.9e-22 107.1 84 64.3
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 9.9e-22 107.1 106 51.9
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 9.9e-22 107.1 105 52.4
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 9.9e-22 107.1 97 54.6
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 1.3e-21 106.7 119 48.7
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.3e-21 106.7 90 63.3
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.3e-21 106.7 90 63.3
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.3e-21 106.7 99 53.5
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 1.7e-21 106.3 94 57.4
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 2.2e-21 105.9 107 50.5
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.2e-21 105.9 83 61.4
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 2.2e-21 105.9 90 55.6
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.9e-21 105.5 85 61.2
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 3.8e-21 105.1 112 50.0
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 3.8e-21 105.1 79 64.6
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 3.8e-21 105.1 79 64.6
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 4.9e-21 104.8 122 47.5
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 4.9e-21 104.8 122 47.5
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 4.9e-21 104.8 122 47.5
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 4.9e-21 104.8 88 56.8
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 6.4e-21 104.4 110 49.1
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 6.4e-21 104.4 110 49.1
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 1.4e-20 103.2 67 71.6
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 1.4e-20 103.2 92 54.3
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 2.4e-20 102.4 105 49.5
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 3.2e-20 102.1 94 57.4
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 4.2e-20 101.7 132 44.7
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 4.2e-20 101.7 91 53.8
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 5.4e-20 101.3 92 55.4
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 9.3e-20 100.5 105 51.4
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 9.3e-20 100.5 101 53.5
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.2e-19 100.1 102 50.0
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 2.1e-19 99.4 99 56.6
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 2.7e-19 99.0 79 65.8
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 3.5e-19 98.6 122 45.1
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 6.0e-19 97.8 99 53.5
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 1.3e-18 96.7 96 51.0
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.7e-18 96.3 66 68.2
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 2.3e-18 95.9 71 62.0
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.8e-15 86.3 65 61.5
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 9.9e-14 80.5 67 52.2
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 1.3e-13 80.1 63 55.6
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 3.2e-12 75.5 80 41.2
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 4.6e-11 71.6 76 43.4
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 1.8e-10 69.7 66 53.0
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 1.1e-07 60.5 49 61.2
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.4e-07 60.1 50 66.0


User provided reference genes

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