Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13107_v3 Cicer arietinum L. HOM05D005831 ORTHO05D007007 2.1e-166 589.0 303 100.0
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 1.0e-123 447.2 347 72.6
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 9.4e-122 440.7 346 69.9
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 1.0e-120 437.2 346 69.9
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 1.4e-120 436.8 346 69.4
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 2.3e-120 436.0 346 69.7
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 6.7e-120 434.5 346 69.1
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 2.0e-116 422.9 315 72.1
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 1.9e-106 389.8 346 64.5
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 8.0e-97 357.8 344 60.5
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 1.0e-96 357.5 342 60.8
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 5.2e-96 355.1 348 60.1
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 5.2e-96 355.1 317 63.7
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 6.8e-96 354.8 343 59.8
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 2.0e-95 353.2 343 58.6
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 2.0e-95 353.2 348 59.5
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 7.5e-95 351.3 347 59.4
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 4.9e-94 348.6 334 61.1
Psat6g022600 Pisum sativum HOM05D005831 ORTHO05D007007 1.1e-93 347.4 241 77.2
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 1.8e-93 346.7 345 59.4
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 3.1e-93 345.9 358 57.5
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 7.0e-93 344.7 350 58.0
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 9.2e-93 344.4 334 59.6
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 4.5e-92 342.0 343 58.0
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 7.8e-92 341.3 324 58.0
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 1.3e-91 340.5 337 58.5
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 1.3e-91 340.5 350 57.1
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 1.3e-91 340.5 324 59.0
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 8.6e-91 337.8 323 59.8
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 5.6e-90 335.1 340 57.4
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 7.3e-90 334.7 350 55.7
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 2.1e-89 333.2 346 54.6
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 1.0e-88 330.9 324 58.6
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 1.4e-88 330.5 328 58.5
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 1.4e-88 330.5 349 58.5
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 2.3e-88 329.7 319 56.7
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 3.0e-88 329.3 322 58.4
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 5.2e-88 328.6 337 58.5
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 5.2e-88 328.6 346 54.0
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 6.8e-88 328.2 346 57.5
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 6.8e-88 328.2 346 57.5
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 6.8e-88 328.2 346 54.3
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 8.9e-88 327.8 346 55.2
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 1.2e-87 327.4 292 62.7
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 1.5e-87 327.0 344 55.5
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 2.0e-87 326.6 346 54.0
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 5.7e-87 325.1 338 57.4
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 9.8e-87 324.3 328 56.4
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 1.3e-86 323.9 343 55.7
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 1.3e-86 323.9 346 54.6
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 1.3e-86 323.9 307 58.3
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 4.9e-86 322.0 330 56.4
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 8.3e-86 321.2 328 56.1
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 2.4e-85 319.7 328 57.0
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 2.4e-85 319.7 323 56.3
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 2.4e-85 319.7 344 56.1
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 7.0e-85 318.2 329 55.3
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 7.0e-85 318.2 314 59.9
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 9.2e-85 317.8 325 56.6
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 9.2e-85 317.8 335 55.8
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 2.0e-84 316.6 345 52.5
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 4.6e-84 315.5 331 55.3
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 5.9e-84 315.1 333 56.2
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 1.0e-83 314.3 339 53.7
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 1.3e-83 313.9 342 55.6
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 3.9e-83 312.4 338 54.1
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 7.3e-82 308.1 336 53.3
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 1.2e-81 307.4 337 53.7
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 1.6e-81 307.0 337 53.4
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 1.6e-81 307.0 342 52.0
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 6.2e-81 305.1 338 50.9
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 3.1e-80 302.8 336 52.1
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 8.9e-80 301.2 330 53.0
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 1.5e-79 300.4 334 52.4
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 3.4e-79 299.3 340 52.9
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 3.4e-79 299.3 340 52.9
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 4.4e-79 298.9 259 66.4
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 7.5e-79 298.1 336 51.2
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 9.8e-79 297.7 338 52.7
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 3.7e-78 295.8 335 52.2
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 4.9e-78 295.4 315 54.6
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.9e-77 293.5 319 53.9
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 2.4e-77 293.1 386 47.7
TPR.G38878 Trifolium pratense HOM05D005831 ORTHO05D007007 4.1e-77 292.4 209 77.5
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 3.0e-75 286.2 336 50.9
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 5.0e-75 285.4 314 53.5
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 1.2e-73 280.8 270 58.9
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 6.2e-73 278.5 237 64.1
Dinv41837 Davidia involucrata HOM05D005831 ORTHO05D007007 1.4e-72 277.3 283 56.9
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 6.8e-72 275.0 336 50.9
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 1.2e-71 274.2 284 54.6
Gohir.A07G020300 Gossypium hirsutum HOM05D005831 ORTHO05D007007 2.0e-71 273.5 238 62.6
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 7.5e-71 271.6 334 49.4
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 9.9e-71 271.2 341 49.0
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 2.4e-69 266.5 352 48.9
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 5.4e-69 265.4 319 50.5
arahy.Tifrunner.gnm1.ann1.VR587A Arachis hypogaea HOM05D005831 ORTHO05D007007 1.4e-64 250.8 353 48.2
Sed0000493 Sechium edule HOM05D005831 ORTHO05D007007 1.4e-64 250.8 243 56.0
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 4.0e-64 249.2 338 48.8
Migut.A00085 Erythranthe guttata HOM05D005831 ORTHO05D007007 3.2e-61 239.6 234 56.0
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 7.8e-52 208.4 307 48.5
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.6e-49 200.7 336 43.5
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 6.9e-48 195.3 229 51.5
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 1.2e-47 194.5 294 42.5
Zm00001eb108960 Zea mays HOM05D005831 ORTHO05D007007 3.4e-47 193.0 239 43.9
SHI18844 Sapria himalayana HOM05D005831 ORTHO05D007007 2.1e-44 183.7 222 52.7
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 2.7e-44 183.3 200 53.5
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 8.7e-43 178.3 197 53.3
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 1.5e-42 177.6 372 38.4
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.8e-40 170.6 350 39.4
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 1.8e-40 170.6 288 38.2
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 5.3e-40 169.1 233 46.8
TPR.G40658 Trifolium pratense HOM05D005831 ORTHO05D007007 2.4e-37 160.2 143 65.0
HPP92_027843 Vanilla planifolia HOM05D005831 ORTHO05D007007 1.6e-36 157.5 194 47.9
SEGI_09079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.1e-24 118.2 169 45.6
Psat0s2173g0120 Pisum sativum HOM05D012210 ORTHO05D007007 2.9e-22 110.2 63 88.9
Actinidia27570 Actinidia chinensis HOM05D005831 ORTHO05D007007 1.4e-21 107.8 247 34.4
AagrBONN_evm.TU.Sc2ySwM_117.3066 Anthoceros agrestis HOM05D005831 ORTHO05D007007 1.9e-21 107.5 146 41.8
RcHm_v2.0_Chr4g0387071 Rosa chinensis HOM05D005831 ORTHO05D007007 3.0e-19 100.1 106 54.7
arahy.Tifrunner.gnm1.ann1.FV9EQX Arachis hypogaea HOM05D005831 ORTHO05D007007 5.7e-18 95.9 69 71.0
CARHR118440 Cardamine hirsuta HOM05D005831 ORTHO05D007007 9.7e-18 95.1 86 55.8
CBR_g34477 Chara braunii HOM05D005831 ORTHO05D007007 1.8e-16 90.9 360 25.6
Aqoxy5G02406 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.2e-15 88.2 205 36.1
HPP92_027844 Vanilla planifolia HOM05D005831 ORTHO05D007007 7.7e-15 85.5 79 62.0
SEGI_09068 Sequoiadendron giganteum HOM05D005831 ORTHO05D007007 6.5e-14 82.4 69 65.2
PRCOL_00001676 Prasinoderma coloniale HOM05D005831 ORTHO05D007007 3.2e-13 80.1 253 28.9
Solyc08g061880.2 Solanum lycopersicum HOM05D005831 ORTHO05D007007 1.3e-09 68.2 62 66.1
QL06p019149 Quercus lobata HOM05D005831 ORTHO05D007007 8.2e-09 65.5 101 45.5
MCO12G124 Micromonas commoda HOM05D005831 ORTHO05D007007 1.5e-07 61.2 283 25.1
Cfa027250 Carpinus fangiana HOM05D005831 ORTHO05D007007 5.9e-07 59.3 284 23.6


User provided reference genes

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