Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 8.5e-304 1046.2 525 100.0
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 2.2e-243 845.5 564 77.5
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.1e-242 841.3 525 84.4
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.2e-238 829.7 564 76.2
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.3e-235 819.7 566 76.0
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 3.5e-233 811.6 565 74.9
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 5.6e-231 804.3 563 74.6
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 9.6e-231 803.5 564 74.3
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 2.8e-230 802.0 564 74.3
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 6.2e-230 800.8 561 75.6
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.4e-229 799.7 565 74.2
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 5.2e-229 797.7 565 74.5
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 1.9e-226 789.3 564 73.2
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 1.9e-226 789.3 565 73.3
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 3.2e-226 788.5 564 72.9
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 2.3e-224 782.3 550 74.2
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 1.1e-221 773.5 565 72.7
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 4.4e-220 768.1 564 72.3
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 5.8e-220 767.7 590 70.7
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 4.2e-218 761.5 564 70.6
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 7.1e-218 760.8 550 72.5
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 1.1e-215 753.4 560 71.1
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 1.1e-215 753.4 560 71.1
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 3.9e-208 728.4 563 67.3
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 8.1e-206 720.7 565 67.4
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 1.1e-202 710.3 562 66.4
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 4.2e-202 708.4 562 66.2
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 9.3e-202 707.2 560 67.0
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 6.0e-201 704.5 551 66.6
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 1.8e-200 703.0 528 69.1
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 6.7e-200 701.0 566 65.2
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.5e-199 699.1 552 67.6
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 2.5e-199 699.1 567 65.3
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 1.3e-198 696.8 570 64.6
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 1.3e-198 696.8 570 64.2
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.3e-198 696.8 563 65.7
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 3.1e-197 692.2 570 64.0
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 5.3e-197 691.4 564 64.5
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 6.9e-197 691.0 566 65.0
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 6.9e-197 691.0 567 64.6
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 6.9e-197 691.0 563 66.3
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 1.2e-196 690.3 529 68.6
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 7.6e-196 687.6 496 73.8
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 2.5e-194 682.6 525 67.8
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.2e-194 682.2 525 68.0
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 4.2e-194 681.8 525 67.6
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 1.6e-193 679.9 567 64.0
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.1e-193 679.5 525 67.6
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 6.1e-193 677.9 565 63.5
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 1.3e-192 676.8 569 64.3
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.8e-192 676.4 525 67.4
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.9e-192 675.2 530 67.2
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 5.1e-192 674.9 557 64.8
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 1.5e-191 673.3 550 64.2
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 4.3e-191 671.8 570 62.5
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 9.7e-191 670.6 574 62.9
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 1.3e-190 670.2 552 64.7
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 1.6e-190 669.8 570 63.0
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 4.8e-190 668.3 574 62.7
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 4.8e-190 668.3 561 62.7
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 6.9e-189 664.5 539 64.6
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.5e-188 663.3 492 69.7
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 2.0e-188 662.9 550 64.0
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 2.6e-188 662.5 572 62.2
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 3.4e-188 662.1 503 68.2
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 2.9e-187 659.1 544 65.3
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 3.2e-186 655.6 547 63.8
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 7.2e-186 654.4 548 62.2
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 7.2e-186 654.4 503 67.4
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 1.6e-185 653.3 520 64.4
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 6.7e-184 647.9 540 62.8
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 6.7e-184 647.9 563 60.4
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 8.8e-184 647.5 562 61.0
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 2.0e-183 646.4 578 59.0
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 3.3e-183 645.6 572 61.0
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 4.3e-183 645.2 530 63.8
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 9.7e-183 644.0 540 62.4
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 2.2e-182 642.9 573 59.9
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 6.3e-182 641.3 540 62.6
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.4e-181 640.2 530 63.8
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 4.5e-180 635.2 565 60.9
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 5.9e-180 634.8 517 65.2
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 5.9e-180 634.8 537 61.3
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.0e-179 634.0 548 61.5
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 2.9e-179 632.5 552 60.9
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 2.9e-179 632.5 495 67.5
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 3.8e-179 632.1 562 60.5
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 1.4e-178 630.2 574 57.7
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 3.2e-178 629.0 551 61.2
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.2e-177 627.1 558 59.7
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 2.7e-177 625.9 549 60.3
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 2.3e-176 622.9 532 61.5
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 5.1e-176 621.7 565 59.8
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 2.0e-175 619.8 570 58.1
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.3e-175 619.0 481 64.9
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 4.4e-175 618.6 553 59.1
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 1.7e-174 616.7 514 64.2
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.2e-174 616.3 579 56.8
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 2.8e-174 615.9 627 55.7
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 5.3e-173 611.7 559 58.9
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 9.1e-173 610.9 537 59.4
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 2.0e-172 609.8 553 59.0
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 5.9e-172 608.2 354 88.1
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.0e-171 607.4 559 58.5
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.0e-171 607.4 578 56.2
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.3e-171 607.1 495 66.5
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 1.7e-171 606.7 553 58.6
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 2.9e-171 605.9 572 58.9
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 1.9e-170 603.2 553 58.4
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 3.2e-170 602.4 550 58.4
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 5.5e-170 601.7 562 58.0
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 1.8e-168 596.7 545 58.3
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.8e-168 596.7 543 57.5
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.3e-166 590.5 534 60.9
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 3.7e-166 589.0 501 61.9
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 1.4e-165 587.0 549 58.1
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 3.2e-162 575.9 477 62.5
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 8.8e-160 567.8 407 73.5
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 2.8e-158 562.8 546 59.0
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 5.4e-157 558.5 485 60.6
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.6e-153 547.0 567 54.9
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 2.7e-153 546.2 418 65.6
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 1.0e-152 544.3 556 54.0
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.1e-146 524.2 415 62.9
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 2.4e-141 506.5 557 52.1
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 2.7e-140 503.1 576 48.8
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 1.4e-133 480.7 483 55.1
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 1.0e-131 474.6 433 58.9
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.3e-131 474.2 548 49.3
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 4.1e-125 452.6 554 47.8
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 2.1e-124 450.3 564 47.7
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 4.6e-124 449.1 517 49.5
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 3.0e-123 446.4 375 64.5
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 5.6e-122 442.2 471 53.5
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 8.1e-113 411.8 573 44.2
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 4.0e-112 409.5 566 41.7
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 4.4e-111 406.0 376 57.4
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 5.3e-104 382.5 382 57.6
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 2.2e-102 377.1 562 41.3
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 1.3e-89 334.7 434 49.8
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 2.2e-73 280.8 517 37.1
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 5.3e-72 276.2 543 35.0
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 2.0e-71 274.2 320 44.1
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 1.1e-66 258.5 175 77.1
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.4e-56 224.9 247 54.7
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 7.5e-50 202.6 195 56.9
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 3.6e-44 183.7 91 93.4
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 2.6e-42 177.6 150 67.3
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 1.3e-41 175.3 111 77.5
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 9.1e-40 169.1 474 29.5
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 4.5e-39 166.8 366 34.2
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 2.3e-38 164.5 416 31.0
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 2.1e-36 157.9 165 63.0
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.3e-35 154.5 173 50.3
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 1.3e-33 148.7 112 67.0
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 1.6e-31 141.7 125 49.6
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 1.0e-30 139.0 131 58.0
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 2.1e-28 131.3 112 61.6
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 1.8e-27 128.3 430 26.3
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 8.0e-20 102.8 164 38.4
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 5.2e-19 100.1 69 71.0
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 3.3e-13 80.9 39 92.3
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 9.5e-13 79.3 39 89.7
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 2.3e-11 74.7 38 86.8
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 3.4e-10 70.9 38 81.6
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 1.4e-08 65.5 33 81.8
Medtr3g040320 Medicago truncatula HOM05D004210 ORTHO05D005017 4.1e-08 63.9 57 59.6
AT1G10580 Arabidopsis thaliana HOM05D002303 ORTHO05D006504 5.1e-06 57.0 315 23.2
AL1G21402 Arabidopsis lyrata HOM05D002303 ORTHO05D006504 6.6e-06 56.6 315 23.2
CARHR010740 Cardamine hirsuta HOM05D002303 ORTHO05D006504 6.6e-06 56.6 315 23.2
BcaC01g03529 Brassica carinata HOM05D004210 ORTHO05D005017 8.6e-06 56.2 66 45.5


User provided reference genes

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