Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 4.4e-186 654.4 320 100.0
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.8e-171 605.9 318 91.5
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.0e-170 602.4 320 90.3
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 9.2e-168 593.6 318 89.9
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 2.3e-163 578.9 317 88.3
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 2.7e-159 565.5 321 87.9
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 5.6e-157 557.8 318 83.6
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 2.6e-154 548.9 328 81.1
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 7.0e-152 540.8 289 90.7
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.3e-150 536.6 285 91.6
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 8.6e-150 533.9 317 82.0
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 2.5e-149 532.3 314 80.9
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 9.5e-149 530.4 310 80.6
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 9.5e-149 530.4 310 81.0
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.1e-148 529.3 310 80.6
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 8.1e-148 527.3 310 80.3
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 8.9e-147 523.9 319 80.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.0e-146 522.7 320 77.8
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 5.8e-146 521.2 327 78.6
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 7.5e-146 520.8 323 78.6
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 9.8e-146 520.4 320 78.1
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.9e-145 518.8 320 77.8
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 3.7e-145 518.5 327 77.7
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 8.3e-145 517.3 327 77.7
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.1e-144 516.9 318 78.3
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.1e-144 516.9 318 77.7
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.1e-144 516.9 320 77.2
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-144 516.9 320 77.2
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.9e-144 516.2 321 78.2
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 2.4e-144 515.8 320 80.0
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.2e-144 515.4 318 77.4
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 5.4e-144 514.6 329 77.2
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 9.2e-144 513.8 328 77.4
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-143 513.5 320 76.6
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.6e-143 513.1 320 76.9
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.1e-143 512.7 314 79.0
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.7e-143 512.3 323 78.3
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 6.0e-143 511.1 320 76.6
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.3e-142 509.2 288 83.3
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 3.0e-142 508.8 325 77.8
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 6.6e-142 507.7 329 76.3
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 8.6e-142 507.3 328 75.9
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 2.5e-141 505.8 322 77.0
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 3.3e-141 505.4 329 75.7
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 5.6e-141 504.6 329 75.7
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 5.6e-141 504.6 329 75.7
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 2.1e-140 502.7 286 87.8
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.8e-140 502.3 330 75.5
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.8e-140 502.3 330 75.5
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 4.7e-140 501.5 315 77.1
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 8.9e-139 497.3 315 76.8
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 2.0e-138 496.1 317 74.4
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.8e-138 494.6 323 76.8
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 1.7e-137 493.0 317 76.0
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 4.9e-137 491.5 326 75.2
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.1e-136 490.3 338 74.3
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.9e-136 489.6 328 75.0
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 1.9e-136 489.6 320 76.2
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.2e-136 488.8 312 77.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 4.1e-136 488.4 324 76.2
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 4.1e-136 488.4 324 76.2
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 5.4e-136 488.0 323 75.2
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.7e-134 483.0 333 73.6
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 3.0e-134 482.3 287 82.6
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 6.6e-134 481.1 320 73.8
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 6.6e-134 481.1 325 74.8
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.9e-133 479.6 261 90.0
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.3e-133 478.4 326 74.5
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 9.3e-128 460.7 317 73.5
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 3.5e-127 458.8 321 73.5
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 1.0e-126 457.2 311 72.7
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.1e-123 447.2 389 61.2
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 4.0e-123 445.3 426 58.0
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 2.4e-120 436.0 271 79.7
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 4.2e-120 435.3 322 70.8
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.6e-119 433.3 261 79.3
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 7.9e-119 431.0 312 67.6
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 5.1e-118 428.3 327 67.9
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.8e-115 419.9 295 69.8
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.4e-115 419.5 284 72.5
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 6.9e-115 417.9 264 76.1
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.6e-114 416.0 254 75.6
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.4e-112 410.2 341 63.9
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 7.1e-112 407.9 274 72.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 7.9e-111 404.4 247 78.1
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.1e-109 400.6 308 62.3
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.8e-108 395.2 296 71.3
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 6.2e-108 394.8 309 66.3
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 4.5e-106 388.7 308 60.4
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.8e-105 385.6 320 64.1
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.8e-102 376.7 307 59.0
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 8.7e-102 374.4 247 73.7
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.6e-100 370.2 290 61.4
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.1e-100 369.8 314 62.4
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 2.4e-99 366.3 643 37.9
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.4e-96 357.1 333 60.1
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.5e-93 347.1 283 66.4
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 3.7e-92 342.4 260 62.7
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.1e-87 326.6 263 65.8
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 6.7e-86 321.6 208 75.5
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 5.3e-83 312.0 312 54.2
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.5e-80 303.1 240 68.3
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 6.7e-78 295.0 163 84.0
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 9.7e-77 291.2 193 75.6
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 1.6e-74 283.9 188 68.1
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 5.7e-69 265.4 217 58.1
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 6.3e-68 261.9 164 80.5
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.8e-67 260.4 193 71.0
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 7.5e-61 238.4 243 56.0
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 8.3e-60 235.0 322 46.0
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 8.0e-55 218.4 131 80.9
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 7.5e-53 211.8 155 65.8
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 2.2e-52 210.3 145 69.7
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.7e-52 209.5 212 52.4
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 5.7e-45 185.7 101 86.1
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 4.4e-37 159.5 90 83.3
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 6.6e-33 145.6 272 35.3
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 6.2e-31 139.0 114 60.5
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.3e-28 131.3 278 30.6
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 5.1e-25 119.4 80 71.2
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 7.8e-18 95.5 364 24.5
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 9.6e-16 88.6 158 37.3
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 6.4e-12 75.9 54 75.9
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.2e-10 71.6 59 55.9
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.5e-08 64.7 55 60.0
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 3.3e-08 63.5 50 58.0


User provided reference genes

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