Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_13025_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 2.7e-161 572.0 299 100.0
Ca_05862_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 4.5e-68 262.3 216 69.0
Medtr5g079490 Medicago truncatula HOM05D000611 ORTHO05D004334 1.1e-29 134.8 254 38.2
Psat2g041880 Pisum sativum HOM05D000611 ORTHO05D004334 5.1e-27 125.9 199 39.7
LjContig00141g0016319 Lotus japonicus HOM05D000611 ORTHO05D004334 1.1e-26 124.8 252 35.7
TPR.G3467 Trifolium pratense HOM05D000611 ORTHO05D004334 5.6e-26 122.5 212 40.1
Medtr4g007820 Medicago truncatula HOM05D000611 ORTHO05D004334 3.6e-25 119.8 217 38.2
Ca_05859_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 1.1e-24 118.2 93 65.6
Glyma.14G069800 Glycine max HOM05D000611 ORTHO05D004334 8.3e-22 108.6 192 37.5
arahy.Tifrunner.gnm1.ann1.J7PSRM Arachis hypogaea HOM05D000611 ORTHO05D004334 3.3e-18 96.7 216 34.7
Phvul.008G234500 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 1.6e-17 94.4 187 38.0
vmacro22900 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 6.2e-17 92.4 116 43.1
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 8.1e-17 92.0 116 43.1
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 3.1e-16 90.1 136 39.7
Glyma.02G246100 Glycine max HOM05D000611 ORTHO05D004334 5.2e-16 89.4 222 35.1
Eucgr.J01547 Eucalyptus grandis HOM05D000611 ORTHO05D004334 6.8e-16 89.0 143 37.8
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 6.8e-16 89.0 136 41.2
EL10Ac1g01296 Beta vulgaris HOM05D000611 ORTHO05D004334 2.0e-15 87.4 255 29.8
Potri.017G126700 Populus trichocarpa HOM05D000611 ORTHO05D004334 2.0e-15 87.4 89 49.4
arahy.Tifrunner.gnm1.ann1.HDGD4N Arachis hypogaea HOM05D000611 ORTHO05D004334 4.4e-15 86.3 152 36.2
TWI18G1238 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 4.4e-15 86.3 137 40.1
Lalb_Chr20g0116941 Lupinus albus HOM05D000611 ORTHO05D004334 7.6e-15 85.5 161 34.8
PSO017G0779 Papaver somniferum HOM05D000611 ORTHO05D004334 7.6e-15 85.5 223 32.7
Sabra15G0047000 Salix brachista HOM05D000949 ORTHO05D004334 7.6e-15 85.5 118 40.7
Sabra17G0106600 Salix brachista HOM05D000611 ORTHO05D004334 7.6e-15 85.5 118 40.7
VMungo0647G1718 Vigna mungo HOM05D000611 ORTHO05D004334 7.6e-15 85.5 187 34.8
Phvul.008G234400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 9.9e-15 85.1 113 45.1
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 1.3e-14 84.7 117 41.0
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 2.9e-14 83.6 154 36.4
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 6.4e-14 82.4 185 30.8
Actinidia22792 Actinidia chinensis HOM05D000611 ORTHO05D004334 8.4e-14 82.0 116 39.7
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 8.4e-14 82.0 160 34.4
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 8.4e-14 82.0 129 38.8
Eucgr.J01631 Eucalyptus grandis HOM05D000611 ORTHO05D004334 1.9e-13 80.9 121 41.3
PSO170G1854 Papaver somniferum HOM05D000611 ORTHO05D004334 1.9e-13 80.9 124 42.7
PSO170G2195 Papaver somniferum HOM05D000611 ORTHO05D004334 1.9e-13 80.9 205 33.7
arahy.Tifrunner.gnm1.ann1.FBT475 Arachis hypogaea HOM05D000611 ORTHO05D004334 2.4e-13 80.5 189 34.9
Aqoxy3G00114 Aquilegia oxysepala HOM05D000611 ORTHO05D004334 4.2e-13 79.7 128 34.4
CANSAT78G1071 Cannabis sativa HOM05D000611 ORTHO05D004334 4.2e-13 79.7 119 39.5
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 5.4e-13 79.3 116 39.7
TAR622G0440 Trochodendron aralioides HOM05D000611 ORTHO05D004334 5.4e-13 79.3 201 30.8
Haze_14232 Corylus avellana HOM05D000611 ORTHO05D004334 7.1e-13 79.0 118 39.0
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 7.1e-13 79.0 123 40.7
Atru.chr1.1837 Acer truncatum HOM05D000611 ORTHO05D004334 9.2e-13 78.6 169 34.9
Glyma.11G217600 Glycine max HOM05D000611 ORTHO05D004334 9.2e-13 78.6 207 31.4
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 9.2e-13 78.6 177 33.9
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 1.2e-12 78.2 226 29.2
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.6e-12 77.8 104 41.3
Cfa007833 Carpinus fangiana HOM05D000611 ORTHO05D004334 1.6e-12 77.8 118 38.1
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 2.7e-12 77.0 114 38.6
QL11p039394 Quercus lobata HOM05D000611 ORTHO05D004334 3.5e-12 76.6 127 37.8
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 7.8e-12 75.5 117 37.6
QL11p003934 Quercus lobata HOM05D000611 ORTHO05D004334 1.0e-11 75.1 118 38.1
Sed0014398 Sechium edule HOM05D000611 ORTHO05D004334 1.0e-11 75.1 156 32.7
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 1.0e-11 75.1 114 36.0
Gohir.A12G056200 Gossypium hirsutum HOM05D000611 ORTHO05D004334 1.3e-11 74.7 143 35.0
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 1.3e-11 74.7 145 33.1
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 1.3e-11 74.7 145 33.1
Dinv26577 Davidia involucrata HOM05D000611 ORTHO05D004334 1.7e-11 74.3 168 32.1
Gorai.010G046100 Gossypium raimondii HOM05D000611 ORTHO05D004334 2.3e-11 73.9 123 37.4
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.3e-11 73.9 120 36.7
COL.COLO4_15730 Corchorus olitorius HOM05D000611 ORTHO05D004334 3.0e-11 73.6 138 34.1
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 3.0e-11 73.6 206 29.6
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 5.1e-11 72.8 113 38.1
CDE06G1088 Ceratophyllum demersum HOM05D000611 ORTHO05D004334 5.1e-11 72.8 114 35.1
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 5.1e-11 72.8 136 36.0
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 6.6e-11 72.4 113 36.3
TWI12G1101 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 6.6e-11 72.4 136 36.8
MBI16_g23759_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 1.5e-10 71.2 147 36.1
Sc15g0002490 Simmondsia chinensis HOM05D000611 ORTHO05D004334 2.5e-10 70.5 114 39.5
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.5e-10 70.5 171 32.7
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 3.3e-10 70.1 116 37.1
arahy.Tifrunner.gnm1.ann1.1QGT1E Arachis hypogaea HOM05D000611 ORTHO05D004334 9.6e-10 68.6 152 34.9
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 9.6e-10 68.6 117 34.2
Lj2g0020896 Lotus japonicus HOM05D000611 ORTHO05D004334 1.3e-09 68.2 118 39.8
Cfa009035 Carpinus fangiana HOM05D000611 ORTHO05D004334 1.6e-09 67.8 121 36.4
CDE04G0197 Ceratophyllum demersum HOM05D000543 ORTHO05D004334 2.1e-09 67.4 114 32.5
TAR374G0184 Trochodendron aralioides HOM05D000611 ORTHO05D004334 2.8e-09 67.0 116 35.3
ClCG05G011010 Citrullus lanatus HOM05D000611 ORTHO05D004334 3.6e-09 66.6 131 32.8
SGA_v2.0_scaffold63G21737 Striga asiatica HOM05D000611 ORTHO05D004334 3.6e-09 66.6 84 39.3
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 4.8e-09 66.2 149 32.2
CSS0039210 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 4.8e-09 66.2 105 36.2
QL09p038966 Quercus lobata HOM05D000611 ORTHO05D004334 6.2e-09 65.9 155 32.3
arahy.Tifrunner.gnm1.ann1.WY3AB3 Arachis hypogaea HOM05D000611 ORTHO05D004334 8.1e-09 65.5 129 37.2
MD09G1262200 Malus domestica HOM05D000611 ORTHO05D004334 8.1e-09 65.5 193 30.1
DCAR_003177 Daucus carota HOM05D000611 ORTHO05D004334 1.1e-08 65.1 208 26.9
Glyma.04G146300 Glycine max HOM05D000611 ORTHO05D004334 1.1e-08 65.1 124 37.1
AUR62012480 Chenopodium quinoa HOM05D000611 ORTHO05D004334 1.4e-08 64.7 129 31.0
Gorai.006G056800 Gossypium raimondii HOM05D000611 ORTHO05D004334 1.4e-08 64.7 120 35.0
Lsat_1_v5_gn_2_79980 Lactuca sativa HOM05D000379 ORTHO05D004334 1.8e-08 64.3 132 34.1
Nn3g20745 Nelumbo nucifera HOM05D000611 ORTHO05D004334 1.8e-08 64.3 152 30.3
Actinidia36368 Actinidia chinensis HOM05D000611 ORTHO05D004334 3.1e-08 63.5 84 40.5
AUR62023184 Chenopodium quinoa HOM05D000611 ORTHO05D004334 3.1e-08 63.5 196 27.6
Rhsim08G0147400 Rhododendron simsii HOM05D000611 ORTHO05D004334 3.1e-08 63.5 115 33.9
Lalb_Chr18g0053361 Lupinus albus HOM05D000611 ORTHO05D004334 4.0e-08 63.2 80 45.0
AUR62023231 Chenopodium quinoa HOM05D000611 ORTHO05D004334 5.3e-08 62.8 161 27.3
MELO3C020280.2 Cucumis melo HOM05D000611 ORTHO05D004334 5.3e-08 62.8 127 31.5
Lalb_Chr02g0154471 Lupinus albus HOM05D000611 ORTHO05D004334 5.3e-08 62.8 66 47.0
PGR119G2064 Punica granatum HOM05D000611 ORTHO05D004334 9.0e-08 62.0 127 31.5
Phvul.001G231400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 1.2e-07 61.6 164 29.3
CsaV3_3G021570 Cucumis sativus L. HOM05D000611 ORTHO05D004334 2.6e-07 60.5 103 34.0
Rhsim03G0037200 Rhododendron simsii HOM05D000611 ORTHO05D004334 2.6e-07 60.5 93 38.7
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 2.6e-07 60.5 69 44.9
Lj2g0007530 Lotus japonicus HOM05D000611 ORTHO05D004334 3.4e-07 60.1 101 38.6
arahy.Tifrunner.gnm1.ann1.E9G7WB Arachis hypogaea HOM05D000611 ORTHO05D004334 4.4e-07 59.7 129 35.7
Gohir.D06G041233 Gossypium hirsutum HOM05D000611 ORTHO05D004334 4.4e-07 59.7 86 38.4
Nn4g24174 Nelumbo nucifera HOM05D000611 ORTHO05D004334 5.8e-07 59.3 166 29.5
Hund16210 Selenicereus undatus HOM05D000611 ORTHO05D004334 5.8e-07 59.3 144 30.6
TPR.G24736 Trifolium pratense HOM05D000611 ORTHO05D004334 5.8e-07 59.3 126 33.3
MD17G1257100 Malus domestica HOM05D000611 ORTHO05D004334 7.6e-07 58.9 136 31.6
EL10Ac2g04473 Beta vulgaris HOM05D000611 ORTHO05D004334 2.2e-06 57.4 184 26.6
HPP92_009716 Vanilla planifolia HOM05D000611 ORTHO05D004334 2.2e-06 57.4 132 32.6
Os05g0307400 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D007148 2.9e-06 57.0 69 37.7
Migut.L00463 Erythranthe guttata HOM05D000611 ORTHO05D004334 3.8e-06 56.6 218 28.9
Gohir.A09G052128 Gossypium hirsutum HOM05D000611 ORTHO05D004334 8.4e-06 55.5 74 41.9


User provided reference genes

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