Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12964_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 4.6e-73 277.7 133 100.0
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 1.5e-31 139.8 100 71.0
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 9.7e-31 137.1 97 71.1
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 4.8e-30 134.8 104 68.3
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 2.4e-29 132.5 106 67.0
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 9.1e-29 130.6 111 64.0
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 7.7e-28 127.5 101 66.3
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 1.1e-26 123.6 105 66.7
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 1.6e-25 119.8 104 65.4
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 2.6e-23 112.5 114 55.3
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 5.9e-20 101.3 81 66.7
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 5.9e-20 101.3 81 66.7
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 1.7e-19 99.8 93 59.1
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 1.7e-19 99.8 102 57.8
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 5.0e-19 98.2 77 63.6
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 5.0e-19 98.2 108 53.7
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 8.6e-19 97.4 120 50.0
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 1.5e-18 96.7 75 68.0
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 2.5e-18 95.9 85 56.5
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 3.3e-18 95.5 66 69.7
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 3.3e-18 95.5 91 59.3
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 3.3e-18 95.5 85 64.7
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 5.5e-18 94.7 88 62.5
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 9.5e-18 94.0 78 64.1
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.2e-17 93.6 86 53.5
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 2.1e-17 92.8 67 67.2
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 2.1e-17 92.8 76 68.4
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 2.8e-17 92.4 65 70.8
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 3.6e-17 92.0 75 62.7
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 4.7e-17 91.7 75 64.0
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 6.1e-17 91.3 85 57.6
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 6.1e-17 91.3 78 59.0
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 1.8e-16 89.7 66 66.7
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 2.3e-16 89.4 69 62.3
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 3.0e-16 89.0 77 57.1
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 4.0e-16 88.6 96 57.3
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 6.8e-16 87.8 61 72.1
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 6.8e-16 87.8 78 62.8
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 6.8e-16 87.8 98 50.0
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 6.8e-16 87.8 72 62.5
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 8.9e-16 87.4 70 64.3
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 8.9e-16 87.4 87 54.0
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.2e-15 87.0 70 62.9
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 1.2e-15 87.0 66 63.6
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 1.5e-15 86.7 70 61.4
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 1.5e-15 86.7 78 62.8
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 1.5e-15 86.7 78 62.8
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 1.5e-15 86.7 78 62.8
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 1.5e-15 86.7 78 62.8
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 1.5e-15 86.7 77 61.0
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 1.5e-15 86.7 95 48.4
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 2.0e-15 86.3 58 70.7
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 2.0e-15 86.3 66 62.1
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 2.0e-15 86.3 63 69.8
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 2.0e-15 86.3 83 55.4
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 2.0e-15 86.3 67 65.7
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 2.6e-15 85.9 66 65.2
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 4.4e-15 85.1 78 61.5
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.4e-15 85.1 71 63.4
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.4e-15 85.1 71 63.4
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 4.4e-15 85.1 78 60.3
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 4.4e-15 85.1 71 63.4
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 5.7e-15 84.7 70 58.6
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 7.5e-15 84.3 69 63.8
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 9.8e-15 84.0 78 56.4
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 1.3e-14 83.6 71 62.0
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.3e-14 83.6 61 68.9
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.7e-14 83.2 56 67.9
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.7e-14 83.2 58 70.7
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 1.7e-14 83.2 84 53.6
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 2.2e-14 82.8 61 63.9
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 2.8e-14 82.4 64 56.2
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 3.7e-14 82.0 63 65.1
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 3.7e-14 82.0 75 58.7
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 3.7e-14 82.0 69 62.3
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 4.9e-14 81.6 104 51.0
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 4.9e-14 81.6 86 53.5
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 4.9e-14 81.6 64 60.9
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 6.3e-14 81.3 89 52.8
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 6.3e-14 81.3 68 60.3
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 1.1e-13 80.5 81 58.0
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.4e-13 80.1 63 61.9
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 1.4e-13 80.1 68 61.8
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 1.8e-13 79.7 90 53.3
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 3.2e-13 79.0 58 70.7
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 5.4e-13 78.2 70 61.4
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 5.4e-13 78.2 70 61.4
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 7.0e-13 77.8 81 50.6
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 1.6e-12 76.6 61 60.7
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 2.0e-12 76.3 79 54.4
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 3.5e-12 75.5 65 61.5
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 5.9e-12 74.7 79 53.2
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 7.8e-12 74.3 66 54.5
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 1.0e-11 73.9 75 56.0
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 5.0e-11 71.6 62 58.1
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 8.6e-11 70.9 78 44.9
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 1.1e-10 70.5 65 56.9
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 1.1e-10 70.5 72 45.8
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.5e-10 70.1 82 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 1.9e-10 69.7 64 54.7
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 6.1e-09 64.7 42 66.7
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 8.9e-08 60.8 65 47.7
QL06p007766 Quercus lobata HOM05D006526 ORTHO05D008496 1.2e-07 60.5 40 70.0


User provided reference genes

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