Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 4.2e-69 264.6 138 100.0
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 3.9e-51 204.9 137 81.0
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 5.3e-48 194.5 137 79.6
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 3.5e-47 191.8 131 81.7
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 1.5e-26 123.2 133 62.4
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 2.7e-23 112.5 137 57.7
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 4.6e-23 111.7 134 61.9
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.5e-21 106.7 135 57.8
Lalb_Chr21g0315251 Lupinus albus HOM05D002974 ORTHO05D002992 3.3e-21 105.5 132 53.8
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 4.0e-19 98.6 123 50.4
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 5.2e-19 98.2 123 50.4
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 3.4e-18 95.5 122 51.6
Lj3g0024515 Lotus japonicus HOM05D002974 ORTHO05D002992 1.1e-16 90.5 125 52.0
Phvul.011G203450 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.9e-16 89.7 124 50.0
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 9.2e-16 87.4 115 52.2
Glyma.15G232200 Glycine max HOM05D002974 ORTHO05D002992 2.7e-15 85.9 127 49.6
Glyma.13G193800 Glycine max HOM05D002974 ORTHO05D002992 1.1e-13 80.5 129 51.9
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 5.2e-11 71.6 138 39.9
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 6.8e-11 71.2 64 65.6
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 6.8e-11 71.2 64 65.6
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.2e-10 70.5 137 39.4
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 1.2e-10 70.5 118 43.2
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.5e-10 70.1 118 47.5
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.5e-10 70.1 65 58.5
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.4e-10 68.9 128 42.2
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 3.4e-10 68.9 137 43.8
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 4.4e-10 68.6 69 60.9
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.4e-10 68.6 96 46.9
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.4e-10 68.6 69 60.9
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 4.4e-10 68.6 120 45.0
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 5.8e-10 68.2 98 48.0
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.8e-10 68.2 65 63.1
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 7.5e-10 67.8 68 58.8
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 2.2e-09 66.2 65 63.1
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.9e-09 65.9 68 58.8
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 6.4e-09 64.7 128 40.6
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 8.3e-09 64.3 63 58.7
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 8.3e-09 64.3 110 44.5
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 8.3e-09 64.3 77 58.4
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 1.1e-08 63.9 133 37.6
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.4e-08 63.5 55 67.3
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 1.4e-08 63.5 69 56.5
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 1.4e-08 63.5 120 46.7
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.4e-08 63.5 67 50.7
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.9e-08 63.2 47 68.1
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 1.9e-08 63.2 128 39.1
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 1.9e-08 63.2 68 51.5
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.2e-08 62.4 50 68.0
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 3.2e-08 62.4 58 63.8
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 3.2e-08 62.4 60 60.0
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 3.2e-08 62.4 55 63.6
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 4.1e-08 62.0 56 64.3
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 5.4e-08 61.6 102 46.1
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 5.4e-08 61.6 83 48.2
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 7.1e-08 61.2 56 60.7
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 9.2e-08 60.8 55 63.6
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.2e-07 60.5 93 48.4
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 1.2e-07 60.5 118 39.0
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 1.2e-07 60.5 57 59.6
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 1.6e-07 60.1 69 53.6
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.1e-07 59.7 57 57.9
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 2.1e-07 59.7 57 57.9
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 2.1e-07 59.7 52 63.5
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.7e-07 59.3 57 57.9
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 3.5e-07 58.9 101 42.6
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 3.5e-07 58.9 54 57.4
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 4.6e-07 58.5 64 54.7
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 6.0e-07 58.2 40 72.5
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 6.0e-07 58.2 48 70.8
Nitab4.5_0000812g0090 Nicotiana tabacum HOM05D015198 ORTHO05D002992 6.0e-07 58.2 66 51.5
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 7.8e-07 57.8 44 68.2
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 7.8e-07 57.8 145 33.1
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 1.0e-06 57.4 43 72.1
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.0e-06 57.4 56 55.4
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 1.0e-06 57.4 56 55.4
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 1.0e-06 57.4 43 67.4
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.0e-06 57.4 107 42.1
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 1.3e-06 57.0 99 39.4
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 1.7e-06 56.6 46 63.0
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 1.7e-06 56.6 54 59.3
Gohir.D11G322600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.3e-06 56.2 41 68.3
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 2.3e-06 56.2 122 41.0
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 3.0e-06 55.8 43 69.8
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.9e-06 55.5 54 57.4
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.9e-06 55.5 60 58.3
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 3.9e-06 55.5 37 73.0
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 3.9e-06 55.5 47 61.7
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 3.9e-06 55.5 60 55.0
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 3.9e-06 55.5 48 64.6
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 5.1e-06 55.1 42 69.0
Potri.013G043800 Populus trichocarpa HOM05D011447 ORTHO05D010069 5.1e-06 55.1 50 60.0
Potri.016G093900 Populus trichocarpa HOM05D011447 ORTHO05D010069 5.1e-06 55.1 50 60.0
Solyc10g078440.2 Solanum lycopersicum HOM05D015198 ORTHO05D002992 5.1e-06 55.1 60 56.7
Zm00001eb395660 Zea mays HOM05D002974 ORTHO05D002992 5.1e-06 55.1 44 61.4
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 6.6e-06 54.7 68 51.5
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 6.6e-06 54.7 43 67.4
Gorai.007G352700 Gossypium raimondii HOM05D002974 ORTHO05D002992 6.6e-06 54.7 60 53.3
Nitab4.5_0004588g0030 Nicotiana tabacum HOM05D015198 ORTHO05D002992 6.6e-06 54.7 55 56.4
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 6.6e-06 54.7 113 39.8
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 6.6e-06 54.7 54 63.0
Sabra13G0040600 Salix brachista HOM05D011447 ORTHO05D010069 6.6e-06 54.7 50 58.0
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 8.6e-06 54.3 68 50.0
Cpa.g.sc5.168 Carica papaya HOM05D002974 ORTHO05D002992 8.6e-06 54.3 54 57.4
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 8.6e-06 54.3 53 56.6
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 8.6e-06 54.3 129 38.8


User provided reference genes

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