Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12907_v3 Cicer arietinum L. HOM05D003461 ORTHO05D004386 6.2e-277 956.8 482 100.0
Medtr1g010300 Medicago truncatula HOM05D003461 ORTHO05D004386 1.6e-208 729.6 524 74.2
Psat6g031040 Pisum sativum HOM05D003461 ORTHO05D004386 5.2e-191 671.4 528 71.0
TPR.G20094 Trifolium pratense HOM05D003461 ORTHO05D004386 8.9e-183 644.0 525 69.1
Lj5g0000879 Lotus japonicus HOM05D003461 ORTHO05D004386 2.3e-178 629.4 523 64.8
Glyma.14G129500 Glycine max HOM05D003461 ORTHO05D004386 5.1e-178 628.2 525 65.5
Phvul.001G055800 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 1.2e-174 617.1 524 64.3
VMungo0647G1896 Vigna mungo HOM05D003461 ORTHO05D004386 2.6e-174 615.9 525 64.8
Glyma.17G204000 Glycine max HOM05D003461 ORTHO05D004386 9.2e-172 607.4 528 64.6
Lalb_Chr11g0063991 Lupinus albus HOM05D003461 ORTHO05D004386 2.0e-158 563.1 526 59.3
arahy.Tifrunner.gnm1.ann1.3VS957 Arachis hypogaea HOM05D003461 ORTHO05D004386 3.8e-157 558.9 520 57.7
arahy.Tifrunner.gnm1.ann1.4R6GA4 Arachis hypogaea HOM05D003461 ORTHO05D004386 4.9e-157 558.5 520 57.7
Glyma.04G072400 Glycine max HOM05D003461 ORTHO05D004386 9.0e-143 511.1 520 55.2
Glyma.06G073700 Glycine max HOM05D003461 ORTHO05D004386 3.5e-139 499.2 520 54.8
Phvul.009G098100 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 6.0e-139 498.4 521 54.3
VMungo1309G0474 Vigna mungo HOM05D003461 ORTHO05D004386 2.5e-137 493.0 519 52.6
Haze_21625 Corylus avellana HOM05D003461 ORTHO05D004386 5.1e-130 468.8 526 51.9
Cfa013213 Carpinus fangiana HOM05D003461 ORTHO05D004386 2.2e-128 463.4 522 51.7
CiPaw.07G217500 Carya illinoinensis HOM05D003461 ORTHO05D004386 2.6e-126 456.4 519 50.9
QL12p031223 Quercus lobata HOM05D003461 ORTHO05D004386 1.9e-124 450.3 527 50.3
Prupe.1G466400 Prunus persica HOM05D003461 ORTHO05D004386 1.8e-119 433.7 527 49.0
FvH4_2g30180 Fragaria vesca HOM05D003461 ORTHO05D004386 2.4e-119 433.3 520 50.8
FAN24G1347 Fragaria x ananassa HOM05D003461 ORTHO05D004386 1.5e-118 430.6 533 49.2
RcHm_v2.0_Chr6g0312731 Rosa chinensis HOM05D003461 ORTHO05D004386 2.0e-118 430.3 524 49.4
FAN27G2808 Fragaria x ananassa HOM05D003461 ORTHO05D004386 1.0e-117 427.9 520 49.6
FAN15G0070 Fragaria x ananassa HOM05D003461 ORTHO05D004386 4.2e-116 422.5 519 49.1
Potri.018G034700 Populus trichocarpa HOM05D003461 ORTHO05D004386 4.2e-116 422.5 530 47.2
Thecc.09G143900 Theobroma cacao HOM05D003461 ORTHO05D004386 1.5e-113 414.1 536 46.8
FAN20G1067 Fragaria x ananassa HOM05D003461 ORTHO05D004386 3.3e-113 412.9 528 47.7
Atru.chr7.2323 Acer truncatum HOM05D003461 ORTHO05D004386 5.7e-113 412.1 534 47.9
MD15G1115000 Malus domestica HOM05D003461 ORTHO05D004386 2.8e-112 409.8 526 48.1
COL.COLO4_24068 Corchorus olitorius HOM05D003461 ORTHO05D004386 6.3e-112 408.7 534 46.4
Gohir.D06G048151 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.4e-111 407.5 529 46.1
MD08G1135800 Malus domestica HOM05D003461 ORTHO05D004386 1.4e-111 407.5 526 46.6
Gorai.010G053900 Gossypium raimondii HOM05D003461 ORTHO05D004386 2.4e-111 406.8 529 46.1
Sabra18G0035500 Salix brachista HOM05D003461 ORTHO05D004386 4.1e-111 406.0 531 46.9
Duzib150G1527 Durio zibethinus HOM05D003461 ORTHO05D004386 5.3e-111 405.6 530 47.4
TAR383G0906 Trochodendron aralioides HOM05D003461 ORTHO05D004386 2.0e-110 403.7 587 42.9
Gohir.A06G048100 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.3e-109 401.0 529 46.7
PGR044G2079 Punica granatum HOM05D003461 ORTHO05D004386 1.3e-109 401.0 514 46.3
GSVIVG01035727001 Vitis vinifera HOM05D003461 ORTHO05D004386 2.9e-109 399.8 542 45.4
Lj1g0021913 Lotus japonicus HOM05D003461 ORTHO05D004386 1.2e-107 394.4 487 46.8
CSS0003133 Camellia sinensis var. sinensis HOM05D003461 ORTHO05D004386 2.7e-107 393.3 553 43.2
Ciclev10007226m.g Citrus clementina HOM05D003461 ORTHO05D004386 2.7e-107 393.3 534 46.3
Duzib168G0147 Durio zibethinus HOM05D003461 ORTHO05D004386 2.7e-107 393.3 530 44.9
TWI34G1710 Tripterygium wilfordii HOM05D003461 ORTHO05D004386 6.1e-107 392.1 533 44.7
Gohir.A05G010700 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.4e-106 391.0 530 45.7
Gorai.009G011800 Gossypium raimondii HOM05D003461 ORTHO05D004386 3.9e-106 389.4 530 45.3
Gohir.D05G011400 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.1e-105 387.9 530 45.3
CANSAT01G0438 Cannabis sativa HOM05D003461 ORTHO05D004386 1.7e-104 384.0 484 46.5
Actinidia15712 Actinidia chinensis HOM05D003461 ORTHO05D004386 2.4e-103 380.2 541 42.5
Dinv35880 Davidia involucrata HOM05D003461 ORTHO05D004386 4.1e-103 379.4 550 44.0
Dinv30215 Davidia involucrata HOM05D003461 ORTHO05D004386 1.2e-102 377.9 580 43.4
PSO782G2185 Papaver somniferum HOM05D003461 ORTHO05D004386 2.9e-101 373.2 574 41.5
Eucgr.C02859 Eucalyptus grandis HOM05D003461 ORTHO05D004386 4.2e-100 369.4 531 44.3
PSO063G5065 Papaver somniferum HOM05D003461 ORTHO05D004386 1.4e-98 364.4 574 40.8
DCAR_006261 Daucus carota HOM05D003461 ORTHO05D004386 4.0e-98 362.8 571 40.6
ECA240G1832 Erigeron canadensis HOM05D003461 ORTHO05D004386 1.2e-97 361.3 486 45.3
Nn2g11834 Nelumbo nucifera HOM05D003461 ORTHO05D004386 1.2e-97 361.3 592 39.9
Medtr3g108080 Medicago truncatula HOM05D003461 ORTHO05D004386 3.4e-97 359.8 481 45.1
Rhsim07G0154200 Rhododendron simsii HOM05D003461 ORTHO05D004386 3.4e-97 359.8 552 41.8
THA.LOC104819890 Tarenaya hassleriana HOM05D003461 ORTHO05D004386 4.4e-97 359.4 519 42.0
Sc09g0008870 Simmondsia chinensis HOM05D003461 ORTHO05D004386 5.7e-97 359.0 568 41.5
Migut.A00272 Erythranthe guttata HOM05D003461 ORTHO05D004386 1.7e-96 357.5 560 40.2
Hund03002 Selenicereus undatus HOM05D003461 ORTHO05D004386 2.2e-96 357.1 559 41.3
SalBow4G0560 Salvia bowleyana HOM05D003461 ORTHO05D004386 3.1e-95 353.2 570 40.9
TPR.G34693 Trifolium pratense HOM05D003461 ORTHO05D004386 5.9e-94 349.0 482 43.4
Psat5g027760 Pisum sativum HOM05D003461 ORTHO05D004386 1.7e-93 347.4 482 45.6
SGA_v2.0_scaffold27G11498 Striga asiatica HOM05D003461 ORTHO05D004386 2.9e-93 346.7 535 40.2
Nitab4.5_0000125g0120 Nicotiana tabacum HOM05D003461 ORTHO05D004386 3.8e-93 346.3 581 38.2
Nitab4.5_0009600g0020 Nicotiana tabacum HOM05D003461 ORTHO05D004386 6.5e-93 345.5 578 38.4
Cc08_g08280 Coffea canephora HOM05D003461 ORTHO05D004386 4.2e-92 342.8 576 40.1
Lj7C712G2 Lonicera japonica HOM05D003461 ORTHO05D004386 4.2e-92 342.8 511 43.2
CAN.G21.14 Capsicum annuum HOM05D003461 ORTHO05D004386 5.5e-92 342.4 582 39.2
AUR62024833 Chenopodium quinoa HOM05D003461 ORTHO05D004386 6.1e-91 339.0 544 39.9
AUR62032384 Chenopodium quinoa HOM05D003461 ORTHO05D004386 6.1e-91 339.0 547 40.0
AUR62011223 Chenopodium quinoa HOM05D003461 ORTHO05D004386 1.4e-90 337.8 544 40.3
Sp4g05280 Schrenkiella parvula HOM05D003461 ORTHO05D004386 3.0e-90 336.7 519 41.2
EL10Ac2g02534 Beta vulgaris HOM05D003461 ORTHO05D004386 4.0e-90 336.3 554 40.6
Peaxi162Scf00105g01315 Petunia axillaris HOM05D003461 ORTHO05D004386 5.2e-90 335.9 584 37.3
Ca_15696_v3 Cicer arietinum L. HOM05D003461 ORTHO05D004386 8.8e-90 335.1 492 44.5
Thhalv10000008m.g Eutrema salsugineum HOM05D003461 ORTHO05D004386 2.0e-89 334.0 520 41.5
Solyc08g067870.2 Solanum lycopersicum HOM05D003461 ORTHO05D004386 1.4e-87 327.8 581 37.3
Sopen08g021790 Solanum pennellii HOM05D003461 ORTHO05D004386 1.4e-87 327.8 581 37.7
BcaC02g08333 Brassica carinata HOM05D003461 ORTHO05D004386 3.1e-87 326.6 505 41.0
A04p19870 Brassica napus HOM05D003461 ORTHO05D004386 3.1e-87 326.6 495 41.6
BolC4t27084H Brassica oleracea HOM05D003461 ORTHO05D004386 3.1e-87 326.6 505 41.0
AT2G25660 Arabidopsis thaliana HOM05D003461 ORTHO05D004386 1.2e-86 324.7 532 40.4
BraA04t17575Z Brassica rapa HOM05D003461 ORTHO05D004386 1.2e-86 324.7 505 41.0
C04p55600 Brassica napus HOM05D003461 ORTHO05D004386 1.6e-86 324.3 505 40.8
Ah.12g063310 Amaranthus hybridus HOM05D003461 ORTHO05D004386 2.0e-86 323.9 545 41.8
CsaV3_3G046700 Cucumis sativus L. HOM05D003461 ORTHO05D004386 4.5e-86 322.8 512 38.7
Aa31sc76G80 Aethionema arabicum HOM05D003461 ORTHO05D004386 5.9e-86 322.4 525 39.2
AL4G17260 Arabidopsis lyrata HOM05D003461 ORTHO05D004386 5.9e-86 322.4 505 41.2
Aqoxy7G01835 Aquilegia oxysepala HOM05D003461 ORTHO05D004386 7.7e-86 322.0 588 35.9
MELO3C003666.2 Cucumis melo HOM05D003461 ORTHO05D004386 1.3e-85 321.2 512 38.3
BcaB06g28084 Brassica carinata HOM05D003461 ORTHO05D004386 2.9e-85 320.1 498 40.2
Lsat_1_v5_gn_5_45581 Lactuca sativa HOM05D003461 ORTHO05D004386 4.2e-84 316.2 486 41.6
unitig_747.g21880 Utricularia gibba HOM05D003461 ORTHO05D004386 4.2e-84 316.2 521 39.2
Carub.0004s0545 Capsella rubella HOM05D003461 ORTHO05D004386 1.2e-83 314.7 517 40.2
ClCG05G017220 Citrullus lanatus HOM05D003461 ORTHO05D004386 4.7e-83 312.8 513 39.0
Sed0017351 Sechium edule HOM05D003461 ORTHO05D004386 8.0e-83 312.0 514 39.7
HanXRQChr08g0221141 Helianthus annuus HOM05D003461 ORTHO05D004386 8.3e-80 302.0 484 41.7
Zm00001eb122270 Zea mays HOM05D003461 ORTHO05D004386 1.3e-77 294.7 503 39.2
Os01g0179400 Oryza sativa ssp. japonica HOM05D003461 ORTHO05D004386 2.0e-73 280.8 506 35.8
HPP92_015178 Vanilla planifolia HOM05D003461 ORTHO05D004386 4.1e-71 273.1 494 38.5
Oeu019417.3 Olea europaea HOM05D003461 ORTHO05D004386 1.5e-68 264.6 533 35.1
Actinidia14640 Actinidia chinensis HOM05D003461 ORTHO05D004386 1.6e-62 244.6 530 34.0
ATR0037G074 Amborella trichopoda HOM05D003461 ORTHO05D004386 2.3e-61 240.7 584 30.8
Cpa.g.c45312 Carica papaya HOM05D003461 ORTHO05D004386 3.1e-58 230.3 199 62.3
Lsat_1_v5_gn_2_27900 Lactuca sativa HOM05D003461 ORTHO05D004386 6.9e-42 176.0 142 57.0
Lsat_1_v5_gn_4_90040 Lactuca sativa HOM05D003461 ORTHO05D004386 6.9e-42 176.0 142 57.0
Lsat_1_v5_gn_5_111480 Lactuca sativa HOM05D003461 ORTHO05D004386 6.9e-42 176.0 142 57.0
Lsat_1_v5_gn_8_141060 Lactuca sativa HOM05D003461 ORTHO05D004386 1.2e-41 175.3 142 57.0
Mapoly0004s0170 Marchantia polymorpha HOM05D003461 ORTHO05D004386 5.8e-41 172.9 181 50.3
AagrBONN_evm.TU.Sc2ySwM_228.5632 Anthoceros agrestis HOM05D003461 ORTHO05D004386 1.3e-40 171.8 179 51.4
Lsat_1_v5_gn_4_58000 Lactuca sativa HOM05D003461 ORTHO05D004386 2.4e-39 167.5 142 54.9
Lsat_1_v5_gn_9_53361 Lactuca sativa HOM05D003461 ORTHO05D004386 2.4e-39 167.5 142 55.6
SEGI_30777 Sequoiadendron giganteum HOM05D003461 ORTHO05D004386 1.4e-34 151.8 251 37.1
Pp3c4_150 Physcomitrium patens HOM05D003461 ORTHO05D004386 1.5e-33 148.3 197 40.6
CBR_g20101 Chara braunii HOM05D003461 ORTHO05D004386 2.4e-31 141.0 161 47.8
SMO347G0057 Selaginella moellendorffii HOM05D003461 ORTHO05D004386 5.1e-29 133.3 154 42.2


User provided reference genes

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