Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 4.1e-112 409.5 538 100.0
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 4.9e-65 253.1 247 82.2
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 2.4e-64 250.8 245 76.7
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 4.2e-64 250.0 265 67.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.8e-60 237.3 275 69.1
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.1e-59 235.3 246 77.2
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 1.4e-59 235.0 275 69.1
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 4.0e-59 233.4 266 67.3
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 2.3e-54 217.6 270 65.2
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 3.0e-54 217.2 259 67.2
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 2.0e-50 204.5 267 64.0
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 2.2e-44 184.5 271 59.4
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 2.6e-42 177.6 222 67.1
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 2.9e-41 174.1 273 59.7
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 3.0e-38 164.1 268 54.5
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 5.7e-37 159.8 256 58.6
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 6.3e-36 156.4 264 54.2
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 2.0e-34 151.4 248 60.1
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 2.0e-34 151.4 251 58.2
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.0e-33 149.1 263 53.2
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 3.2e-32 144.1 241 59.8
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 4.2e-32 143.7 243 58.0
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.7e-31 141.0 257 55.6
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 4.7e-31 140.2 258 52.7
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 6.1e-31 139.8 257 55.6
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 1.0e-30 139.0 267 54.3
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.8e-30 138.3 259 56.0
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.3e-30 137.9 257 55.3
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 3.0e-30 137.5 267 51.7
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 2.0e-29 134.8 259 55.2
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 1.7e-28 131.7 260 53.5
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 2.8e-28 131.0 241 53.9
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 2.8e-28 131.0 277 52.0
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 4.8e-28 130.2 259 56.8
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.1e-27 129.0 234 57.3
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 3.1e-27 127.5 216 59.3
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.1e-27 127.5 260 55.4
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 4.1e-27 127.1 213 60.6
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 5.3e-27 126.7 259 54.4
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 2.0e-26 124.8 244 55.7
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 4.5e-26 123.6 243 56.0
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 5.9e-26 123.2 233 57.5
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 2.9e-25 120.9 246 55.7
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 5.5e-24 116.7 223 61.9
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 5.5e-24 116.7 259 53.7
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 9.4e-24 115.9 237 56.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.6e-23 115.2 247 53.0
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 2.1e-23 114.8 133 47.4
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 2.7e-23 114.4 247 53.4
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 2.7e-23 114.4 223 58.3
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 4.7e-23 113.6 227 55.1
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 4.7e-23 113.6 249 54.2
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 4.7e-23 113.6 114 51.8
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 1.0e-22 112.5 250 53.2
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 1.4e-22 112.1 247 53.4
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 1.8e-22 111.7 258 53.5
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 3.0e-22 110.9 247 49.0
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 1.1e-21 109.0 260 53.5
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.3e-20 105.5 242 54.1
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.7e-20 105.1 267 49.4
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 4.8e-20 103.6 229 54.6
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 1.1e-19 102.4 223 53.8
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 4.1e-19 100.5 267 50.2
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 7.0e-19 99.8 267 49.8
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 2.0e-18 98.2 236 56.4
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 3.5e-18 97.4 114 47.4
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 6.5e-17 93.2 229 53.7
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 8.5e-17 92.8 87 52.9
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 1.9e-16 91.7 232 50.4
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 1.9e-16 91.7 134 40.3
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 2.5e-16 91.3 220 56.8
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 3.2e-16 90.9 132 40.9
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 7.2e-16 89.7 264 51.5
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 6.1e-15 86.7 224 54.0
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 8.0e-15 86.3 115 40.0
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 6.8e-14 83.2 212 55.2
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.2e-13 82.4 210 52.4
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 1.5e-13 82.0 206 57.3
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.0e-13 81.6 227 52.0
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 3.4e-13 80.9 123 39.8
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 4.4e-13 80.5 223 53.4
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 7.5e-13 79.7 85 49.4
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 2.2e-12 78.2 223 52.9
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 3.7e-12 77.4 192 51.6
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 1.1e-11 75.9 220 53.2
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 7.0e-11 73.2 120 35.8
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.2e-10 72.4 77 51.9
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 7.7e-10 69.7 210 51.0
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 7.7e-10 69.7 79 43.0
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 2.9e-09 67.8 162 59.3
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 5.5e-08 63.5 87 36.8
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 2.7e-07 61.2 107 34.6
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 8.0e-07 59.7 74 45.9
ATR0661G014 Amborella trichopoda HOM05D041650 ORTHO05D031096 1.8e-06 58.5 95 35.8
ATR0620G088 Amborella trichopoda HOM05D041650 ORTHO05D031096 2.3e-06 58.2 62 43.5


User provided reference genes

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