Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 6.1e-129 464.2 233 100.0
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 2.2e-115 419.1 233 89.7
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 2.8e-113 412.1 233 89.7
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 1.6e-108 396.4 234 85.5
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 1.2e-95 353.6 234 77.8
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 8.3e-94 347.4 237 75.1
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 5.4e-93 344.7 237 74.7
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 3.3e-90 335.5 187 85.0
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 4.3e-90 335.1 237 72.6
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 2.1e-89 332.8 237 71.3
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 1.2e-84 317.0 237 69.6
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 2.7e-84 315.8 210 74.3
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 1.0e-83 313.9 219 71.2
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 2.3e-83 312.8 222 74.8
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 3.3e-82 308.9 239 67.8
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 3.3e-82 308.9 239 67.8
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 5.6e-82 308.1 195 75.4
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 1.6e-81 306.6 238 65.5
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 1.4e-80 303.5 232 64.7
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 3.1e-80 302.4 199 72.9
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 1.5e-79 300.1 210 71.4
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 2.6e-79 299.3 231 64.9
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 5.8e-79 298.1 191 75.9
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 5.8e-79 298.1 212 70.8
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 1.3e-78 297.0 210 70.5
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 2.2e-78 296.2 189 75.1
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 3.8e-78 295.4 231 64.9
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 4.9e-78 295.0 242 62.4
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 6.4e-78 294.7 201 73.1
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 8.4e-78 294.3 231 64.1
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 1.4e-77 293.5 209 70.3
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 1.4e-77 293.5 245 62.4
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 1.9e-77 293.1 228 64.9
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 1.9e-77 293.1 228 64.9
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 1.9e-77 293.1 245 60.8
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 2.4e-77 292.7 188 72.9
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 3.2e-77 292.4 209 68.4
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 3.2e-77 292.4 234 62.8
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 4.1e-77 292.0 204 68.1
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 4.1e-77 292.0 242 64.0
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 4.1e-77 292.0 234 62.8
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 5.4e-77 291.6 217 68.2
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 7.1e-77 291.2 204 69.1
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 7.1e-77 291.2 188 72.3
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 7.1e-77 291.2 230 63.0
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 7.1e-77 291.2 188 72.3
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 7.1e-77 291.2 230 63.0
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 7.1e-77 291.2 217 67.7
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 7.1e-77 291.2 208 70.2
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 9.2e-77 290.8 188 75.5
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 9.2e-77 290.8 194 74.2
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 9.2e-77 290.8 226 62.8
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 1.2e-76 290.4 228 64.5
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 1.2e-76 290.4 235 61.3
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 1.6e-76 290.0 188 72.3
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 2.1e-76 289.7 240 63.8
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 2.1e-76 289.7 237 60.8
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 2.1e-76 289.7 237 60.8
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 2.1e-76 289.7 237 60.8
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 3.5e-76 288.9 188 74.5
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 3.5e-76 288.9 204 68.1
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 7.8e-76 287.7 236 62.7
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 1.0e-75 287.3 217 70.5
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 1.3e-75 287.0 210 67.1
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 1.7e-75 286.6 188 72.9
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.7e-75 286.6 219 66.2
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 1.7e-75 286.6 237 64.1
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.3e-75 286.2 235 62.6
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 3.9e-75 285.4 234 61.1
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 3.9e-75 285.4 219 65.8
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 5.1e-75 285.0 188 76.1
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 1.1e-74 283.9 193 73.1
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 2.5e-74 282.7 223 65.9
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 3.3e-74 282.3 216 67.1
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 1.4e-72 276.9 218 65.1
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 1.8e-72 276.6 183 71.0
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 1.8e-72 276.6 195 67.7
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 5.2e-72 275.0 211 66.4
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 1.2e-71 273.9 159 80.5
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 7.6e-71 271.2 214 64.0
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 9.9e-71 270.8 248 59.7
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 1.3e-70 270.4 234 59.8
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 1.7e-70 270.0 189 68.8
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 2.2e-70 269.6 173 75.1
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 3.8e-70 268.9 162 77.8
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 3.8e-70 268.9 191 67.5
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 8.4e-70 267.7 205 65.4
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 9.3e-69 264.2 186 67.2
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 1.0e-67 260.8 201 66.2
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.3e-66 255.8 214 60.3
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 9.6e-66 254.2 243 57.6
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 2.1e-65 253.1 164 71.3
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 2.8e-65 252.7 235 59.1
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 3.6e-65 252.3 213 62.9
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 6.9e-64 248.1 213 61.5
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 4.9e-62 241.9 160 69.4
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 8.4e-62 241.1 156 71.8
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.6e-60 236.9 231 58.9
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.1e-60 236.5 212 57.5
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 2.0e-55 219.9 198 53.0
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 7.1e-53 211.5 120 80.8
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 1.0e-51 207.6 183 61.2
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 5.6e-50 201.8 188 58.0
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 1.6e-49 200.3 194 48.5
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 2.4e-48 196.4 170 53.5
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 5.3e-48 195.3 163 57.7
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 5.8e-47 191.8 158 64.6
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.1e-45 187.6 140 65.7
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 3.2e-45 186.0 208 47.1
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.8e-43 180.3 124 68.5
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 2.0e-39 166.8 109 74.3
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 5.0e-30 135.6 128 53.9
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 7.9e-28 128.3 174 39.7
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 6.7e-27 125.2 91 68.1
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 2.1e-20 103.6 213 33.3
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 8.8e-19 98.2 198 33.8
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 7.4e-18 95.1 168 31.0
PRCOL_00004658 Prasinoderma coloniale HOM05D006422 ORTHO05D007992 9.7e-18 94.7 200 34.0
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 1.2e-15 87.8 71 59.2
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 1.4e-08 64.3 257 25.7
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 7.7e-07 58.5 178 23.6
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 2.2e-06 57.0 194 22.7
Pp3c3_12020 Physcomitrium patens HOM05D005663 ORTHO05D007258 2.2e-06 57.0 208 26.0
Lsat_1_v5_gn_9_118261 Lactuca sativa HOM05D003483 ORTHO05D004101 2.9e-06 56.6 225 22.2
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 2.9e-06 56.6 178 25.3
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 3.8e-06 56.2 170 27.1
Cc02_g22350 Coffea canephora HOM05D003483 ORTHO05D004101 6.5e-06 55.5 214 27.6
MELO3C010097.2 Cucumis melo HOM05D003483 ORTHO05D004101 6.5e-06 55.5 215 23.3
HanXRQChr06g0185051 Helianthus annuus HOM05D003483 ORTHO05D004101 8.5e-06 55.1 174 22.4


User provided reference genes

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