Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12814_v3 Cicer arietinum L. HOM05D008234 ORTHO05D010422 6.1e-233 810.4 413 100.0
TPR.G12012 Trifolium pratense HOM05D008234 ORTHO05D010422 7.9e-172 607.4 416 78.1
Lj1g0008618 Lotus japonicus HOM05D008234 ORTHO05D010422 2.5e-162 575.9 397 74.6
Medtr1g008360 Medicago truncatula HOM05D008234 ORTHO05D010422 6.3e-153 544.7 413 71.4
Psat6g034200 Pisum sativum HOM05D008234 ORTHO05D010422 2.2e-137 493.0 415 66.0
Psat6g034160 Pisum sativum HOM05D008234 ORTHO05D010422 3.4e-122 442.6 425 60.2
Glyma.14G141400 Glycine max HOM05D008234 ORTHO05D010422 4.3e-117 425.6 383 59.5
Dinv14224 Davidia involucrata HOM05D008234 ORTHO05D010422 9.2e-112 407.9 390 56.2
Actinidia31219 Actinidia chinensis HOM05D008234 ORTHO05D010422 5.8e-106 388.7 390 52.1
Prupe.1G453000 Prunus persica HOM05D008234 ORTHO05D010422 1.1e-104 384.4 391 54.5
Phvul.001G078800 Phaseolus vulgaris HOM05D008234 ORTHO05D010422 7.8e-103 378.3 416 52.4
TWI34G1157 Tripterygium wilfordii HOM05D008234 ORTHO05D010422 5.1e-94 349.0 388 49.2
Hma1.2p1_1255F.1_g270650 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 1.1e-93 347.8 315 56.2
MSTRG.25893 Avicennia marina HOM05D008234 ORTHO05D010422 7.3e-93 345.1 409 47.2
QL12p026340 Quercus lobata HOM05D008234 ORTHO05D010422 2.1e-92 343.6 398 50.3
Lsat_1_v5_gn_6_11021 Lactuca sativa HOM05D008234 ORTHO05D010422 1.4e-91 340.9 400 45.0
Lj7P707T11 Lonicera japonica HOM05D008234 ORTHO05D010422 4.0e-91 339.3 331 53.2
RcHm_v2.0_Chr6g0305711 Rosa chinensis HOM05D008234 ORTHO05D010422 8.9e-91 338.2 377 51.2
SGA_v2.0_scaffold185G40113 Striga asiatica HOM05D008234 ORTHO05D010422 4.4e-90 335.9 393 44.8
Aqoxy7G03839 Aquilegia oxysepala HOM05D008234 ORTHO05D010422 1.3e-89 334.3 415 46.0
CiPaw.08G023300 Carya illinoinensis HOM05D008234 ORTHO05D010422 2.9e-89 333.2 400 49.8
TAR626G1903 Trochodendron aralioides HOM05D008234 ORTHO05D010422 2.9e-89 333.2 389 47.8
Ah.16g105160 Amaranthus hybridus HOM05D008234 ORTHO05D010422 4.2e-88 329.3 388 46.4
CDE04G1659 Ceratophyllum demersum HOM05D008234 ORTHO05D010422 3.5e-87 326.2 414 46.9
FAN20G2600 Fragaria x ananassa HOM05D008234 ORTHO05D010422 1.5e-85 320.9 336 50.6
Migut.A00244 Erythranthe guttata HOM05D008234 ORTHO05D010422 3.6e-84 316.2 390 44.4
HanXRQChr02g0048071 Helianthus annuus HOM05D008234 ORTHO05D010422 8.1e-84 315.1 382 45.5
SalBow4G0332 Salvia bowleyana HOM05D008234 ORTHO05D010422 1.3e-81 307.8 388 45.1
Sabra06G0190100 Salix brachista HOM05D008234 ORTHO05D010422 8.4e-81 305.1 392 44.9
Cc08_g08970 Coffea canephora HOM05D008234 ORTHO05D010422 3.3e-77 293.1 415 41.2
Manes.03G062500 Manihot esculenta HOM05D008234 ORTHO05D010422 9.6e-77 291.6 392 43.9
Hund19548 Selenicereus undatus HOM05D008234 ORTHO05D010422 7.6e-74 282.0 387 41.9
AUR62023021 Chenopodium quinoa HOM05D008234 ORTHO05D010422 9.3e-72 275.0 384 41.7
MD08G1118800 Malus domestica HOM05D008234 ORTHO05D010422 4.6e-71 272.7 395 43.5
FAN15G0125 Fragaria x ananassa HOM05D008234 ORTHO05D010422 1.8e-70 270.8 345 45.8
FvH4_2g36160 Fragaria vesca HOM05D008234 ORTHO05D010422 5.6e-69 265.8 332 45.8
Os03g0159700 Oryza sativa ssp. japonica HOM05D008234 ORTHO05D010422 1.3e-68 264.6 385 38.7
ECA233G2242 Erigeron canadensis HOM05D008234 ORTHO05D010422 4.0e-67 259.6 275 49.5
Ciclev10008407m.g Citrus clementina HOM05D008234 ORTHO05D010422 1.2e-66 258.1 418 41.6
Thecc.03G110200 Theobroma cacao HOM05D008234 ORTHO05D010422 1.3e-65 254.6 392 40.8
CSS0041765 Camellia sinensis var. sinensis HOM05D008234 ORTHO05D010422 2.9e-65 253.4 412 39.3
Gohir.A03G071900 Gossypium hirsutum HOM05D008234 ORTHO05D010422 2.9e-65 253.4 323 44.0
Duzib068G0878 Durio zibethinus HOM05D008234 ORTHO05D010422 3.8e-65 253.1 387 40.6
Potri.006G243000 Populus trichocarpa HOM05D008234 ORTHO05D010422 1.1e-64 251.5 386 40.7
GSVIVG01035674001 Vitis vinifera HOM05D008234 ORTHO05D010422 1.4e-64 251.1 382 40.8
Zm00001eb004480 Zea mays HOM05D008234 ORTHO05D010422 3.5e-63 246.5 388 37.6
HPP92_009609 Vanilla planifolia HOM05D008234 ORTHO05D010422 1.8e-62 244.2 341 39.6
MELO3C003586.2 Cucumis melo HOM05D008234 ORTHO05D010422 3.9e-62 243.0 292 47.9
CsaV3_3G047390 Cucumis sativus L. HOM05D008234 ORTHO05D010422 1.9e-61 240.7 293 46.8
AUR62009335 Chenopodium quinoa HOM05D008234 ORTHO05D010422 9.6e-61 238.4 293 44.7
Cfa013340 Carpinus fangiana HOM05D001758 ORTHO05D005969 1.6e-60 237.7 322 43.8
EL10Ac2g04079 Beta vulgaris HOM05D008234 ORTHO05D010422 1.8e-59 234.2 410 37.3
COL.COLO4_28841 Corchorus olitorius HOM05D008234 ORTHO05D010422 1.1e-56 224.9 369 39.6
ATR0697G092 Amborella trichopoda HOM05D008234 ORTHO05D010422 7.2e-56 222.2 379 38.0
Haze_21845 Corylus avellana HOM05D008234 ORTHO05D010422 1.5e-53 214.5 322 41.9
Oeu011264.1 Olea europaea HOM05D008234 ORTHO05D010422 4.3e-53 213.0 299 40.8
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 4.8e-52 209.5 221 49.3
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.4e-51 208.0 384 33.6
Gorai.003G103400 Gossypium raimondii HOM05D008234 ORTHO05D001322 8.5e-49 198.7 279 42.7
Nn2g11729 Nelumbo nucifera HOM05D008234 ORTHO05D010422 1.5e-45 188.0 388 33.5
Gohir.D03G098600 Gossypium hirsutum HOM05D008234 ORTHO05D010422 4.7e-39 166.4 175 54.3
SEGI_11609 Sequoiadendron giganteum HOM05D008234 ORTHO05D010422 3.3e-37 160.2 250 37.6
Gohir.D03G098650 Gossypium hirsutum HOM05D008234 ORTHO05D010422 8.5e-33 145.6 137 54.0
Hma1.2p1_1434F.1_g283110 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 6.5e-17 92.8 86 47.7
Sed0021692 Sechium edule HOM05D008234 ORTHO05D010422 1.0e-14 85.5 99 45.5
ClCG00G003600 Citrullus lanatus HOM05D005775 ORTHO05D000023 7.8e-10 69.3 316 22.8
ClCG00G000230 Citrullus lanatus HOM05D005775 ORTHO05D000023 1.7e-09 68.2 193 25.9
Psat7g051760 Pisum sativum HOM05D006414 ORTHO05D007780 1.5e-08 65.1 114 34.2
Aqoxy5G00981 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 1.6e-07 61.6 102 35.3
Aqoxy6G00504 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 1.6e-07 61.6 102 35.3
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 1.6e-07 61.6 167 25.7
SMO353G0107 Selaginella moellendorffii HOM05D000001 ORTHO05D000003 2.1e-07 61.2 204 24.5
Ca_17703_v3 Cicer arietinum L. HOM05D006414 ORTHO05D007780 2.8e-07 60.8 96 37.5
Potri.016G119600 Populus trichocarpa HOM05D005775 ORTHO05D000023 3.6e-07 60.5 359 18.9
CDE01G0240 Ceratophyllum demersum HOM05D005862 ORTHO05D007731 6.1e-07 59.7 395 22.0
CDE09G1117 Ceratophyllum demersum HOM05D007173 ORTHO05D009151 8.0e-07 59.3 163 28.2
Medtr8g091670 Medicago truncatula HOM05D006414 ORTHO05D007780 1.0e-06 58.9 96 35.4
PSO210G0586 Papaver somniferum HOM05D001779 ORTHO05D001753 1.0e-06 58.9 222 23.0
CDE10G1362 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 1.4e-06 58.5 108 32.4
ClCG01G019140 Citrullus lanatus HOM05D006414 ORTHO05D007780 1.4e-06 58.5 96 36.5
PSO761G0432 Papaver somniferum HOM05D001779 ORTHO05D001753 1.4e-06 58.5 222 23.0
TAR376G0418 Trochodendron aralioides HOM05D002825 ORTHO05D003824 1.4e-06 58.5 175 26.3
CsaV3_6G045830 Cucumis sativus L. HOM05D006414 ORTHO05D007780 2.3e-06 57.8 96 36.5
Lalb_Chr07g0184891 Lupinus albus HOM05D006414 ORTHO05D007780 2.3e-06 57.8 96 34.4
Hund22619 Selenicereus undatus HOM05D001779 ORTHO05D001753 3.0e-06 57.4 207 22.2
Sopen01g021730 Solanum pennellii HOM05D001779 ORTHO05D001753 3.0e-06 57.4 248 20.6
TPR.G2171 Trifolium pratense HOM05D006414 ORTHO05D007780 3.0e-06 57.4 96 35.4
EL10Ac2g04386 Beta vulgaris HOM05D004783 ORTHO05D005581 4.0e-06 57.0 165 26.7
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 5.2e-06 56.6 339 20.9
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 5.2e-06 56.6 141 29.1
AUR62009429 Chenopodium quinoa HOM05D004783 ORTHO05D005581 6.8e-06 56.2 226 26.1
Nitab4.5_0000156g0020 Nicotiana tabacum HOM05D006414 ORTHO05D007780 6.8e-06 56.2 96 33.3
Nitab4.5_0002133g0010 Nicotiana tabacum HOM05D006414 ORTHO05D007780 6.8e-06 56.2 96 33.3
Peaxi162Scf01651g00012 Petunia axillaris HOM05D006414 ORTHO05D007780 6.8e-06 56.2 96 33.3
Sed0012904 Sechium edule HOM05D006414 ORTHO05D007780 6.8e-06 56.2 94 36.2
AUR62023108 Chenopodium quinoa HOM05D004783 ORTHO05D005581 8.9e-06 55.8 227 26.0
MBI16_g36317_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 8.9e-06 55.8 173 23.7
Zm00001eb194340 Zea mays HOM05D006414 ORTHO05D007780 8.9e-06 55.8 94 36.2


User provided reference genes

Program Settings