Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12796_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.0e-182 643.3 323 100.0
Ca_18962_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 8.5e-105 384.4 405 57.0
Ca_04570_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 8.6e-65 251.5 343 49.0
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 7.5e-61 238.4 320 46.9
Ca_24156_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 9.9e-61 238.0 309 48.2
Ca_14755_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 6.4e-60 235.3 231 62.3
Ca_20021_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 6.2e-55 218.8 407 38.3
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 6.6e-49 198.7 154 68.8
Ca_05035_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 3.3e-48 196.4 168 63.7
Ca_26697_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 6.2e-47 192.2 261 47.1
Ca_28461_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 2.9e-44 183.3 156 71.8
Ca_06640_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 9.3e-43 178.3 247 43.7
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 7.3e-40 168.7 260 40.0
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 2.3e-33 147.1 87 79.3
Ca_06557_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 4.8e-31 139.4 77 84.4
Ca_23084_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 9.3e-27 125.2 77 76.6
Ca_22995_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 9.6e-24 115.2 130 43.1
Ca_02147_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 6.2e-23 112.5 88 52.3
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 9.3e-19 98.6 88 52.3
TPR.G3229 Trifolium pratense HOM05D000017 ORTHO05D007253 9.3e-19 98.6 100 45.0
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 1.2e-18 98.2 87 51.7
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 2.7e-18 97.1 97 48.5
Ca_14871_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 4.6e-18 96.3 86 47.7
Ca_19105_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 4.6e-18 96.3 198 35.9
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 4.6e-18 96.3 86 48.8
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 2.3e-17 94.0 100 43.0
Ca_12267_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 3.0e-17 93.6 86 46.5
Ca_16174_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 3.9e-17 93.2 86 45.3
Ca_26949_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 1.1e-16 91.7 89 44.9
Ca_02580_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 9.7e-16 88.6 84 46.4
Ca_07183_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 9.7e-16 88.6 235 33.2
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 2.8e-15 87.0 86 43.0
TPR.G18584 Trifolium pratense HOM05D000017 ORTHO05D007253 2.8e-15 87.0 64 56.2
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 3.7e-15 86.7 87 46.0
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 6.3e-15 85.9 86 46.5
TPR.G35471 Trifolium pratense HOM05D000017 ORTHO05D009679 1.4e-14 84.7 66 51.5
Ca_20470_v3 Cicer arietinum L. HOM05D010632 ORTHO05D034590 1.5e-13 81.3 187 34.8
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.6e-13 80.5 74 45.9
Ca_03024_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 1.3e-12 78.2 107 38.3
TPR.G18641 Trifolium pratense HOM05D000017 ORTHO05D007253 2.2e-12 77.4 82 43.9
arahy.Tifrunner.gnm1.ann1.ZR77QB Arachis hypogaea HOM05D000017 ORTHO05D007253 5.5e-11 72.8 82 42.7
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 1.2e-10 71.6 78 39.7
Ca_22667_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 2.7e-10 70.5 210 30.0
Dinv03558 Davidia involucrata HOM05D007975 ORTHO05D010011 4.6e-10 69.7 88 37.5
Medtr2g018850 Medicago truncatula HOM05D000017 ORTHO05D000013 6.1e-10 69.3 89 34.8
CSS0015681 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.8e-09 67.8 76 36.8
CSS0048468 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.8e-09 67.8 76 38.2
Dinv10054 Davidia involucrata HOM05D000017 ORTHO05D000013 1.8e-09 67.8 70 40.0
CSS0031758 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.3e-09 67.4 76 38.2
CSS0000290 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.9e-09 66.6 76 36.8
CSS0024128 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.1e-09 66.2 76 36.8
ECA234G4280 Erigeron canadensis HOM05D000774 ORTHO05D000602 6.7e-09 65.9 65 44.6
CSS0024078 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.5e-08 63.9 76 32.9
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.5e-08 63.9 76 34.2
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 2.5e-08 63.9 68 42.6
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 2.5e-08 63.9 68 42.6
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 2.5e-08 63.9 68 42.6
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.3e-08 63.2 101 30.7
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.3e-08 63.2 101 30.7
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.7e-08 62.8 76 32.9
CAN.G864.10 Capsicum annuum HOM05D000017 ORTHO05D007253 5.7e-08 62.8 62 43.5
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.4e-08 62.4 76 32.9
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.4e-08 62.4 76 32.9
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.4e-08 62.4 76 32.9
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 9.7e-08 62.0 75 38.7
Dinv26922 Davidia involucrata HOM05D000017 ORTHO05D009679 1.3e-07 61.6 75 38.7
HanXRQChr15g0493111 Helianthus annuus HOM05D002876 ORTHO05D007253 1.3e-07 61.6 93 36.6
TWI09G0645 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-07 61.6 75 34.7
TWI38G0856 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-07 61.6 75 36.0
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-07 60.8 82 35.4
TWI31G0287 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-07 60.8 79 32.9
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-07 60.8 82 35.4
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-07 60.8 82 35.4
TWI75G0784 Tripterygium wilfordii HOM05D000017 ORTHO05D007253 2.2e-07 60.8 82 35.4
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-07 60.5 82 35.4
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 6.3e-07 59.3 69 42.0
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 8.2e-07 58.9 116 35.3
Dinv09296 Davidia involucrata HOM05D001162 ORTHO05D001218 8.2e-07 58.9 69 40.6
Sed0014455 Sechium edule HOM05D012029 ORTHO05D014680 8.2e-07 58.9 75 38.7
Sopen02g035490 Solanum pennellii HOM05D005268 ORTHO05D007253 8.2e-07 58.9 71 35.2
Sopen07g005140 Solanum pennellii HOM05D000017 ORTHO05D000013 8.2e-07 58.9 71 35.2
Medtr6g086675 Medicago truncatula HOM05D000017 ORTHO05D007253 1.1e-06 58.5 60 40.0
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 2.4e-06 57.4 65 38.5
Dinv00066 Davidia involucrata HOM05D008341 ORTHO05D007253 3.1e-06 57.0 69 39.1
SHI17934 Sapria himalayana HOM05D002876 ORTHO05D000013 3.1e-06 57.0 58 46.6
TAR511G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 3.1e-06 57.0 64 37.5
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.1e-06 56.6 64 37.5
Dinv01505 Davidia involucrata HOM05D007975 ORTHO05D010011 5.3e-06 56.2 48 47.9
MBI02_g40783_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 5.3e-06 56.2 75 30.7
AUR62032729 Chenopodium quinoa HOM05D000861 ORTHO05D007385 6.9e-06 55.8 77 36.4
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 6.9e-06 55.8 69 39.1
MBI03_g21288_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 6.9e-06 55.8 69 33.3
AL7G47640 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 9.1e-06 55.5 80 35.0


User provided reference genes

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