Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12750_v3 Cicer arietinum L. HOM05D002558 ORTHO05D002768 2.9e-32 141.4 74 100.0
Psat6g037800 Pisum sativum HOM05D002558 ORTHO05D002768 7.3e-20 100.1 67 80.6
Glyma.17G194200 Glycine max HOM05D002558 ORTHO05D002768 3.6e-19 97.8 66 81.8
TPR.G24532 Trifolium pratense HOM05D002558 ORTHO05D002768 3.1e-18 94.7 67 77.6
Phvul.002G267100 Phaseolus vulgaris HOM05D002558 ORTHO05D002768 6.9e-18 93.6 68 77.9
Glyma.14G146200 Glycine max HOM05D002558 ORTHO05D002768 7.6e-17 90.1 67 79.1
Glyma.04G083900 Glycine max HOM05D002558 ORTHO05D002768 9.9e-17 89.7 63 79.4
Glyma.06G085600 Glycine max HOM05D002558 ORTHO05D002768 1.4e-15 85.9 69 72.5
VMungo1309G0315 Vigna mungo HOM05D000191 ORTHO05D000122 2.4e-15 85.1 68 75.0
VMungo0251G1540 Vigna mungo HOM05D002558 ORTHO05D002768 4.2e-15 84.3 59 79.7
Medtr3g110202 Medicago truncatula HOM05D002558 ORTHO05D002768 2.1e-14 82.0 63 73.0
Eucgr.C02926 Eucalyptus grandis HOM05D002558 ORTHO05D002768 6.0e-14 80.5 67 58.2
ClCG08G012260 Citrullus lanatus HOM05D002558 ORTHO05D002768 7.9e-14 80.1 63 66.7
COL.COLO4_20966 Corchorus olitorius HOM05D000191 ORTHO05D000122 1.8e-13 79.0 67 61.2
Lalb_Chr08g0243091 Lupinus albus HOM05D002558 ORTHO05D002768 1.8e-13 79.0 68 69.1
TPR.G1349 Trifolium pratense HOM05D002558 ORTHO05D002768 2.3e-13 78.6 76 61.8
GSVIVG01035629001 Vitis vinifera HOM05D002558 ORTHO05D002768 3.0e-13 78.2 68 58.8
Peaxi162Scf01204g00123 Petunia axillaris HOM05D002558 ORTHO05D002768 5.1e-13 77.4 63 68.3
TWI63G0866 Tripterygium wilfordii HOM05D002558 ORTHO05D002768 5.1e-13 77.4 68 64.7
AUR62009287 Chenopodium quinoa HOM05D002558 ORTHO05D002768 1.1e-12 76.3 69 60.9
AUR62039693 Chenopodium quinoa HOM05D002558 ORTHO05D002768 1.1e-12 76.3 69 60.9
Medtr1g006605 Medicago truncatula HOM05D002558 ORTHO05D002768 2.5e-12 75.1 66 68.2
MD15G1093900 Malus domestica HOM05D002558 ORTHO05D002768 4.3e-12 74.3 69 58.0
Ah.10g035040 Amaranthus hybridus HOM05D002558 ORTHO05D002768 5.6e-12 73.9 69 60.9
Duzib168G1844 Durio zibethinus HOM05D002558 ORTHO05D002768 5.6e-12 73.9 62 62.9
Thecc.09G044700 Theobroma cacao HOM05D002558 ORTHO05D002768 5.6e-12 73.9 62 62.9
Cfa013362 Carpinus fangiana HOM05D002558 ORTHO05D002768 1.3e-11 72.8 63 60.3
Ca_15596_v3 Cicer arietinum L. HOM05D002558 ORTHO05D002768 1.3e-11 72.8 47 83.0
Duzib150G0654 Durio zibethinus HOM05D002558 ORTHO05D002768 1.6e-11 72.4 59 64.4
TWI34G1326 Tripterygium wilfordii HOM05D002558 ORTHO05D002768 1.6e-11 72.4 68 63.2
TAR626G0604 Trochodendron aralioides HOM05D002558 ORTHO05D002768 2.8e-11 71.6 68 54.4
CiPaw.07G204600 Carya illinoinensis HOM05D002558 ORTHO05D002768 3.7e-11 71.2 69 59.4
Gohir.A06G093000 Gossypium hirsutum HOM05D002558 ORTHO05D002768 3.7e-11 71.2 62 59.7
Gohir.A08G249984 Gossypium hirsutum HOM05D002558 ORTHO05D002768 3.7e-11 71.2 61 59.0
Gorai.010G107100 Gossypium raimondii HOM05D002558 ORTHO05D002768 3.7e-11 71.2 62 61.3
Solyc11g071220.2 Solanum lycopersicum HOM05D002558 ORTHO05D002768 3.7e-11 71.2 64 65.6
Sopen11g028900 Solanum pennellii HOM05D002558 ORTHO05D002768 3.7e-11 71.2 64 65.6
PGSC0003DMG400018583 Solanum tuberosum HOM05D002558 ORTHO05D002768 3.7e-11 71.2 64 65.6
arahy.Tifrunner.gnm1.ann1.9C8SD4 Arachis hypogaea HOM05D002558 ORTHO05D002768 4.8e-11 70.9 70 60.0
arahy.Tifrunner.gnm1.ann1.KPU76V Arachis hypogaea HOM05D002558 ORTHO05D002768 4.8e-11 70.9 70 60.0
Gorai.004G289900 Gossypium raimondii HOM05D002558 ORTHO05D002768 4.8e-11 70.9 61 57.4
SGA_v2.0_scaffold103G29960 Striga asiatica HOM05D002558 ORTHO05D002768 4.8e-11 70.9 64 62.5
MELO3C011144.2 Cucumis melo HOM05D002558 ORTHO05D002768 6.2e-11 70.5 66 60.6
Lj1g0018167 Lotus japonicus HOM05D002558 ORTHO05D002768 6.2e-11 70.5 66 63.6
Sc09g0009270 Simmondsia chinensis HOM05D002558 ORTHO05D002768 6.2e-11 70.5 71 59.2
CsaV3_2G030890 Cucumis sativus L. HOM05D002558 ORTHO05D002768 8.1e-11 70.1 65 61.5
vmacro05369 Vaccinium macrocarpon HOM05D002558 ORTHO05D002768 8.1e-11 70.1 65 60.0
Phvul.009G109500 Phaseolus vulgaris HOM05D002558 ORTHO05D002768 1.1e-10 69.7 64 65.6
Aqoxy7G01488 Aquilegia oxysepala HOM05D002558 ORTHO05D002768 1.4e-10 69.3 68 52.9
Migut.A00207 Erythranthe guttata HOM05D002558 ORTHO05D002768 1.4e-10 69.3 72 55.6
Gohir.D08G271500 Gossypium hirsutum HOM05D002558 ORTHO05D002768 1.4e-10 69.3 61 57.4
Lj7C702T4 Lonicera japonica HOM05D002558 ORTHO05D002768 1.4e-10 69.3 74 52.7
Potri.006G238800 Populus trichocarpa HOM05D002558 ORTHO05D002768 1.8e-10 68.9 70 55.7
FAN15G3002 Fragaria x ananassa HOM05D002558 ORTHO05D002768 2.4e-10 68.6 84 46.4
Potri.018G043800 Populus trichocarpa HOM05D002558 ORTHO05D002768 2.4e-10 68.6 68 61.8
Prupe.1G448700 Prunus persica HOM05D002558 ORTHO05D002768 2.4e-10 68.6 83 43.4
CAN.G309.70 Capsicum annuum HOM05D000001 ORTHO05D011234 3.1e-10 68.2 63 65.1
Lj1g0013926 Lotus japonicus HOM05D002558 ORTHO05D002768 3.1e-10 68.2 70 64.3
CDE08G0456 Ceratophyllum demersum HOM05D002558 ORTHO05D002768 4.0e-10 67.8 67 52.2
Psat5g021640 Pisum sativum HOM05D002558 ORTHO05D002768 4.0e-10 67.8 53 71.7
Ciclev10009557m.g Citrus clementina HOM05D002558 ORTHO05D002768 5.3e-10 67.4 61 62.3
MBI01_g24461_MAGBIO Magnolia biondii HOM05D002558 ORTHO05D002768 5.3e-10 67.4 67 50.7
MD08G1114400 Malus domestica HOM05D002558 ORTHO05D002768 5.3e-10 67.4 66 53.0
Lsat_1_v5_gn_5_33620 Lactuca sativa HOM05D002558 ORTHO05D002768 6.9e-10 67.0 91 48.4
Nn2g11627 Nelumbo nucifera HOM05D002558 ORTHO05D002768 9.0e-10 66.6 67 49.3
Oeu012198.1 Olea europaea HOM05D002558 ORTHO05D002768 9.0e-10 66.6 72 56.9
RcHm_v2.0_Chr6g0306181 Rosa chinensis HOM05D002558 ORTHO05D002768 9.0e-10 66.6 80 48.8
Hund19519 Selenicereus undatus HOM05D002558 ORTHO05D002768 9.0e-10 66.6 69 55.1
FvH4_2g35630 Fragaria vesca HOM05D002558 ORTHO05D002768 1.2e-09 66.2 84 46.4
Actinidia15737 Actinidia chinensis HOM05D002558 ORTHO05D002768 1.5e-09 65.9 73 54.8
Os05g0596200 Oryza sativa ssp. japonica HOM05D002558 ORTHO05D002768 1.5e-09 65.9 67 50.7
ECA246G0608 Erigeron canadensis HOM05D005233 ORTHO05D006308 2.6e-09 65.1 85 44.7
Sabra06G0186800 Salix brachista HOM05D002558 ORTHO05D002768 2.6e-09 65.1 63 57.1
Sabra18G0043900 Salix brachista HOM05D002558 ORTHO05D002768 2.6e-09 65.1 63 60.3
HanXRQChr08g0234401 Helianthus annuus HOM05D002558 ORTHO05D002768 4.5e-09 64.3 44 75.0
THA.LOC104799194 Tarenaya hassleriana HOM05D002558 ORTHO05D002768 4.5e-09 64.3 63 61.9
FAN27G0094 Fragaria x ananassa HOM05D002558 ORTHO05D002768 7.6e-09 63.5 79 45.6
Lalb_Chr23g0269601 Lupinus albus HOM05D002558 ORTHO05D002768 7.6e-09 63.5 65 61.5
Oeu031547.2 Olea europaea HOM05D002558 ORTHO05D002768 1.3e-08 62.8 73 53.4
PSO210G0675 Papaver somniferum HOM05D002558 ORTHO05D002768 1.3e-08 62.8 77 44.2
AL6G22300 Arabidopsis lyrata HOM05D000191 ORTHO05D002768 1.7e-08 62.4 60 58.3
Nn3g18172 Nelumbo nucifera HOM05D002558 ORTHO05D002768 2.9e-08 61.6 68 50.0
Carub.0006s1008 Capsella rubella HOM05D002558 ORTHO05D002768 3.8e-08 61.2 60 56.7
MBI04_g27061_MAGBIO Magnolia biondii HOM05D002558 ORTHO05D002768 3.8e-08 61.2 67 47.8
MSTRG.25908 Avicennia marina HOM05D002558 ORTHO05D002768 4.9e-08 60.8 67 58.2
CARHR201620 Cardamine hirsuta HOM05D002558 ORTHO05D002768 4.9e-08 60.8 59 54.2
CiPaw.08G025400 Carya illinoinensis HOM05D002558 ORTHO05D002768 4.9e-08 60.8 44 61.4
CDE02G1533 Ceratophyllum demersum HOM05D000191 ORTHO05D000122 4.9e-08 60.8 72 47.2
PSO210G3671 Papaver somniferum HOM05D002558 ORTHO05D002768 4.9e-08 60.8 77 44.2
AT5G11600 Arabidopsis thaliana HOM05D002558 ORTHO05D002768 8.4e-08 60.1 60 56.7
BolC2t06476H Brassica oleracea HOM05D002558 ORTHO05D002768 1.1e-07 59.7 52 59.6
CANSAT25G1183 Cannabis sativa HOM05D002558 ORTHO05D002768 1.1e-07 59.7 44 63.6
FAN20G1950 Fragaria x ananassa HOM05D002558 ORTHO05D002768 1.4e-07 59.3 84 41.7
BcaC03g13382 Brassica carinata HOM05D002558 ORTHO05D002768 2.5e-07 58.5 52 57.7
BcaNung01938 Brassica carinata HOM05D002558 ORTHO05D002768 2.5e-07 58.5 52 57.7
C02p05280 Brassica napus HOM05D002558 ORTHO05D002768 2.5e-07 58.5 52 57.7
Gohir.D06G092700 Gossypium hirsutum HOM05D002558 ORTHO05D002768 2.5e-07 58.5 61 52.5
QL12p041571 Quercus lobata HOM05D002558 ORTHO05D002768 2.5e-07 58.5 44 63.6
HPP92_024168 Vanilla planifolia HOM05D002558 ORTHO05D002768 2.5e-07 58.5 65 52.3
Thhalv10014651m.g Eutrema salsugineum HOM05D002558 ORTHO05D002768 3.2e-07 58.2 55 58.2
Sed0023683 Sechium edule HOM05D002558 ORTHO05D002768 5.5e-07 57.4 42 66.7
SalBow4G2117 Salvia bowleyana HOM05D002558 ORTHO05D002768 7.1e-07 57.0 40 70.0
A02p01100 Brassica napus HOM05D002558 ORTHO05D002768 9.3e-07 56.6 52 57.7
BraA02t05090Z Brassica rapa HOM05D002558 ORTHO05D002768 9.3e-07 56.6 52 57.7
Cc08_g09510 Coffea canephora HOM05D002558 ORTHO05D002768 1.2e-06 56.2 38 73.7
Nitab4.5_0001567g0160 Nicotiana tabacum HOM05D002558 ORTHO05D002768 1.6e-06 55.8 38 71.1
Sp6g32015 Schrenkiella parvula HOM05D002558 ORTHO05D002768 1.6e-06 55.8 60 51.7
BcaNung01939 Brassica carinata HOM05D002558 ORTHO05D002768 2.1e-06 55.5 52 57.7
CAN.G309.76 Capsicum annuum HOM05D002558 ORTHO05D002768 2.1e-06 55.5 38 73.7
SalBow4G0694 Salvia bowleyana HOM05D002558 ORTHO05D002768 2.1e-06 55.5 70 48.6
DCAR_000751 Daucus carota HOM05D002558 ORTHO05D002768 2.7e-06 55.1 32 75.0
Atru.chr7.2093 Acer truncatum HOM05D002558 ORTHO05D002768 3.5e-06 54.7 62 53.2
Atru.chr7.2107 Acer truncatum HOM05D002558 ORTHO05D002768 3.5e-06 54.7 62 53.2
Lj8A586T41 Lonicera japonica HOM05D002558 ORTHO05D002768 3.5e-06 54.7 33 72.7
Aa31LG3G15580 Aethionema arabicum HOM05D002558 ORTHO05D002768 6.0e-06 53.9 75 53.3


User provided reference genes

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