Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 9.7e-226 786.6 420 100.0
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 3.6e-180 635.2 423 84.9
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 7.5e-170 600.9 425 78.6
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 6.2e-164 581.3 420 76.7
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 2.9e-161 572.4 429 75.3
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 3.0e-158 562.4 432 74.1
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.6e-148 530.0 432 69.7
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 4.0e-147 525.4 423 70.4
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 3.8e-137 492.3 413 64.9
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 1.4e-136 490.3 423 63.4
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.4e-136 489.6 423 63.8
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 4.6e-135 485.3 426 62.9
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 4.6e-135 485.3 287 90.9
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 5.1e-134 481.9 405 64.7
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.1e-134 481.9 405 64.7
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 1.1e-133 480.7 423 62.9
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 2.5e-133 479.6 421 63.2
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.6e-133 478.4 405 64.4
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 1.8e-131 473.4 426 62.7
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 2.4e-131 473.0 449 59.5
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 6.9e-131 471.5 416 61.8
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 1.5e-130 470.3 422 63.5
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 2.6e-130 469.5 421 63.2
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 7.6e-130 468.0 416 61.8
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 6.4e-129 464.9 410 63.2
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.4e-128 463.8 415 63.1
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 1.9e-128 463.4 354 68.9
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.2e-128 462.2 378 65.9
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 7.1e-128 461.5 345 69.0
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-126 457.2 379 64.9
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 3.0e-126 456.1 381 63.8
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 6.7e-126 454.9 435 60.2
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.1e-125 454.1 428 59.8
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-125 453.8 347 69.5
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 5.6e-125 451.8 411 60.8
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 6.2e-124 448.4 411 59.4
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 8.2e-124 448.0 357 66.1
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 8.2e-124 448.0 383 64.0
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 2.4e-123 446.4 344 68.9
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 3.1e-123 446.0 424 58.0
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.2e-122 444.1 432 59.5
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.2e-122 444.1 393 61.6
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 2.0e-122 443.4 370 63.2
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 3.4e-122 442.6 344 67.4
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 5.8e-122 441.8 419 59.7
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 2.2e-121 439.9 383 62.1
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.1e-120 437.6 433 56.4
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.5e-120 436.4 423 58.9
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 3.2e-120 436.0 351 64.4
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.2e-119 434.1 371 62.8
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 1.2e-119 434.1 424 58.5
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 1.2e-119 434.1 424 57.3
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 3.5e-119 432.6 432 57.6
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 8.7e-118 427.9 345 64.6
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 1.3e-116 424.1 423 57.0
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 3.7e-116 422.5 375 60.8
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 4.8e-116 422.2 312 70.5
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.1e-115 419.5 474 53.8
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 4.1e-115 419.1 370 60.3
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 2.6e-114 416.4 360 61.9
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 6.5e-113 411.8 495 50.7
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 4.2e-112 409.1 372 59.7
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 1.2e-111 407.5 365 60.0
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 1.2e-111 407.5 365 60.0
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 3.6e-111 406.0 367 59.7
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 3.6e-111 406.0 367 59.7
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 1.8e-110 403.7 352 61.6
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 1.8e-110 403.7 372 57.8
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 2.3e-110 403.3 334 62.0
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 1.1e-109 401.0 519 52.0
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 2.5e-109 399.8 413 54.5
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 4.3e-109 399.1 366 59.6
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 8.2e-108 394.8 326 63.5
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.6e-106 389.8 410 54.6
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 4.5e-106 389.0 346 61.6
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.4e-104 384.0 394 53.6
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 5.5e-104 382.1 403 53.3
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 1.1e-101 374.4 280 70.0
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-101 374.4 369 57.5
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 1.5e-101 374.0 385 53.0
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 2.0e-101 373.6 342 59.1
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 5.3e-99 365.5 482 46.3
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.6e-98 363.2 332 56.6
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 2.5e-96 356.7 327 60.9
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 2.3e-94 350.1 324 55.9
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 6.7e-94 348.6 323 61.6
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 3.7e-92 342.8 368 54.3
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.2e-90 337.8 361 52.6
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 5.0e-89 332.4 416 50.2
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.7e-81 307.4 292 59.2
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.8e-81 306.2 405 46.7
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.0e-73 281.6 264 59.1
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 1.5e-72 277.7 267 57.3
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 4.7e-71 272.7 340 48.5
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 8.0e-71 271.9 219 65.3
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 1.5e-69 267.7 406 42.4
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 6.3e-68 262.3 240 57.9
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 3.1e-67 260.0 242 62.4
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 1.6e-66 257.7 206 63.1
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.6e-63 247.7 159 82.4
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 3.6e-63 246.5 213 60.1
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.8e-62 244.2 388 40.7
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 4.4e-61 239.6 152 86.8
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 8.3e-60 235.3 241 60.2
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 2.0e-58 230.7 216 57.4
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 6.6e-57 225.7 331 40.8
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 6.6e-57 225.7 158 75.3
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 7.3e-56 222.2 412 36.7
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 8.9e-54 215.3 329 41.3
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 1.5e-53 214.5 248 49.2
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 2.5e-48 197.2 235 52.3
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 3.6e-47 193.4 233 51.5
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.3e-46 190.7 338 36.7
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 5.2e-46 189.5 195 52.8
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 3.7e-44 183.3 226 52.2
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 2.5e-40 170.6 380 34.5
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 4.3e-40 169.9 125 69.6
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-38 164.9 243 39.1
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.4e-38 164.9 366 35.0
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 2.0e-37 161.0 203 45.3
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 3.5e-34 150.2 129 59.7
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 1.5e-32 144.8 359 30.6
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.5e-32 144.1 124 66.9
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 7.3e-32 142.5 336 33.0
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 6.2e-31 139.4 411 29.9
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.4e-30 138.3 345 32.2
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 9.0e-30 135.6 82 87.8
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.4e-29 133.7 356 29.5
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.7e-28 131.3 104 69.2
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.7e-28 131.3 102 69.6
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 1.1e-27 128.6 117 65.0
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 3.2e-27 127.1 117 56.4
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 3.9e-25 120.2 84 66.7
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.6e-24 116.3 116 57.8
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 2.1e-23 114.4 166 40.4
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 1.4e-22 111.7 126 50.0
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 2.4e-19 100.9 80 67.5
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 3.2e-19 100.5 73 78.1
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 3.5e-18 97.1 118 40.7
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 6.7e-17 92.8 53 88.7
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 3.7e-15 87.0 66 59.1
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.1e-14 85.5 81 50.6
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 2.6e-13 80.9 135 39.3
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 7.6e-13 79.3 71 50.7
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 9.9e-13 79.0 64 56.2
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 9.9e-13 79.0 59 71.2
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 5.5e-11 73.2 61 60.7
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-10 72.0 55 69.1
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 7.9e-10 69.3 67 53.7
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.8e-09 68.2 122 32.8
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 2.3e-09 67.8 104 37.5
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 1.1e-06 58.9 68 54.4
unitig_62.g23077 Utricularia gibba HOM05D000943 ORTHO05D008314 1.1e-06 58.9 367 26.4
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.4e-06 58.5 35 74.3
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 5.3e-06 56.6 240 22.1


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