Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12649_v3 Cicer arietinum L. HOM05D007157 ORTHO05D009045 1.1e-212 743.4 488 100.0
TPR.G29476 Trifolium pratense HOM05D007157 ORTHO05D009045 1.3e-128 464.2 452 79.0
Psat3g167400 Pisum sativum HOM05D007157 ORTHO05D009045 5.9e-118 428.7 456 75.4
TPR.G8553 Trifolium pratense HOM05D007157 ORTHO05D009045 2.3e-117 426.8 455 74.3
Medtr7g027940 Medicago truncatula HOM05D007157 ORTHO05D009045 3.9e-117 426.0 466 73.2
Glyma.16G053700 Glycine max HOM05D007157 ORTHO05D009045 6.4e-104 382.1 455 69.0
Lj1g0010660 Lotus japonicus HOM05D007157 ORTHO05D009045 5.4e-103 379.0 455 69.0
arahy.Tifrunner.gnm1.ann1.VP4GDR Arachis hypogaea HOM05D007157 ORTHO05D009045 6.8e-98 362.1 455 67.0
arahy.Tifrunner.gnm1.ann1.LR7EIQ Arachis hypogaea HOM05D007157 ORTHO05D009045 2.9e-96 356.7 455 66.2
Glyma.19G095500 Glycine max HOM05D007157 ORTHO05D009045 1.6e-94 350.9 439 56.5
VMungo1383G0567 Vigna mungo HOM05D007157 ORTHO05D009045 2.8e-91 340.1 455 63.3
FvH4_6g53850 Fragaria vesca HOM05D007157 ORTHO05D009045 8.4e-88 328.6 452 63.9
FAN14G2967 Fragaria x ananassa HOM05D007157 ORTHO05D009045 8.4e-88 328.6 452 63.9
FAN05G0711 Fragaria x ananassa HOM05D007157 ORTHO05D009045 1.9e-87 327.4 452 63.9
Lalb_Chr00c01g0403821 Lupinus albus HOM05D007157 ORTHO05D009045 1.9e-87 327.4 455 64.2
RcHm_v2.0_Chr2g0175991 Rosa chinensis HOM05D007157 ORTHO05D009045 7.1e-87 325.5 452 63.7
MD09G1008000 Malus domestica HOM05D007157 ORTHO05D009045 5.6e-84 315.8 455 57.8
Haze_14901 Corylus avellana HOM05D007157 ORTHO05D009045 5.1e-77 292.7 455 60.2
Cfa007204 Carpinus fangiana HOM05D007157 ORTHO05D009045 2.8e-75 287.0 455 60.2
Prupe.3G308900 Prunus persica HOM05D007157 ORTHO05D009045 9.0e-74 282.0 455 55.2
Sabra16G0209300 Salix brachista HOM05D007157 ORTHO05D009045 2.0e-73 280.8 471 56.9
CANSAT64G2603 Cannabis sativa HOM05D007157 ORTHO05D009045 3.8e-72 276.6 455 57.6
Rhsim10G0004500 Rhododendron simsii HOM05D007157 ORTHO05D009045 4.6e-70 269.6 455 56.3
Thecc.04G040600 Theobroma cacao HOM05D007157 ORTHO05D009045 4.6e-70 269.6 461 57.7
Dinv25644 Davidia involucrata HOM05D007157 ORTHO05D009045 1.1e-68 265.0 460 57.6
Lj5A824G14 Lonicera japonica HOM05D007157 ORTHO05D009045 1.1e-66 258.5 461 52.3
FAN02G1074 Fragaria x ananassa HOM05D007157 ORTHO05D009045 4.0e-66 256.5 434 54.6
Sc03g0006270 Simmondsia chinensis HOM05D007157 ORTHO05D009045 6.9e-66 255.8 455 55.8
Atru.chr6.2599 Acer truncatum HOM05D007157 ORTHO05D009045 1.2e-65 255.0 461 55.3
Ciclev10014547m.g Citrus clementina HOM05D007157 ORTHO05D009045 1.2e-65 255.0 453 56.5
Oeu048928.2 Olea europaea HOM05D007157 ORTHO05D009045 5.8e-65 252.7 453 56.1
ECA246G1262 Erigeron canadensis HOM05D000482 ORTHO05D000349 7.6e-65 252.3 460 52.8
CSS0034431 Camellia sinensis var. sinensis HOM05D007157 ORTHO05D009045 4.9e-64 249.6 457 56.9
DCAR_021804 Daucus carota HOM05D007157 ORTHO05D009045 8.4e-64 248.8 456 52.6
Actinidia36218 Actinidia chinensis HOM05D007157 ORTHO05D009045 1.9e-63 247.7 452 57.3
Potri.001G326800 Populus trichocarpa HOM05D007157 ORTHO05D009045 1.9e-63 247.7 429 54.5
ClCG11G009400 Citrullus lanatus HOM05D007157 ORTHO05D009045 3.2e-63 246.9 455 54.3
Hma1.2p1_0812F.1_g222250 Hydrangea macrophylla HOM05D007157 ORTHO05D009045 3.2e-63 246.9 459 55.3
Phvul.001G089400 Phaseolus vulgaris HOM05D007157 ORTHO05D009045 6.0e-62 242.7 226 56.2
CAN.G473.124 Capsicum annuum HOM05D007157 ORTHO05D009045 1.3e-61 241.5 457 51.6
TWI34G0589 Tripterygium wilfordii HOM05D007157 ORTHO05D009045 1.3e-61 241.5 457 56.5
TWI34G1752 Tripterygium wilfordii HOM05D007157 ORTHO05D009045 1.3e-61 241.5 457 56.5
CiPaw.03G058300 Carya illinoinensis HOM05D007157 ORTHO05D009045 1.8e-61 241.1 452 58.6
MSTRG.23478 Avicennia marina HOM05D007157 ORTHO05D009045 2.3e-61 240.7 455 55.8
Manes.04G088300 Manihot esculenta HOM05D007157 ORTHO05D009045 3.3e-60 236.9 455 56.7
Peaxi162Scf00420g00637 Petunia axillaris HOM05D007157 ORTHO05D009045 9.6e-60 235.3 453 49.4
Nitab4.5_0005858g0130 Nicotiana tabacum HOM05D000485 ORTHO05D009045 1.6e-59 234.6 457 34.1
PGSC0003DMG400020245 Solanum tuberosum HOM05D007157 ORTHO05D009045 1.6e-59 234.6 457 51.0
Sed0017582 Sechium edule HOM05D007157 ORTHO05D009045 6.3e-59 232.6 455 55.8
AL6G24740 Arabidopsis lyrata HOM05D007157 ORTHO05D009045 3.1e-58 230.3 453 52.3
SHI04033 Sapria himalayana HOM05D007157 ORTHO05D009045 5.3e-58 229.6 466 32.4
QL02p070811 Quercus lobata HOM05D007157 ORTHO05D009045 6.9e-58 229.2 455 56.5
Sopen02g038950 Solanum pennellii HOM05D007157 ORTHO05D009045 1.5e-57 228.0 486 47.3
vmacro05975 Vaccinium macrocarpon HOM05D007157 ORTHO05D009045 2.6e-57 227.3 428 56.1
Duzib147G0388 Durio zibethinus HOM05D007157 ORTHO05D009045 5.9e-57 226.1 461 55.1
Gohir.D04G075000 Gossypium hirsutum HOM05D007157 ORTHO05D009045 5.9e-57 226.1 456 54.8
C09p63050 Brassica napus HOM05D007157 ORTHO05D009045 7.6e-57 225.7 453 52.3
AUR62029427 Chenopodium quinoa HOM05D007157 ORTHO05D009045 7.6e-57 225.7 465 38.3
COL.COLO4_13293 Corchorus olitorius HOM05D000485 ORTHO05D009045 7.6e-57 225.7 456 54.4
Solyc02g094310.3 Solanum lycopersicum HOM05D007157 ORTHO05D009045 7.6e-57 225.7 453 48.6
SalBow3G1100 Salvia bowleyana HOM05D007157 ORTHO05D009045 3.8e-56 223.4 442 55.7
TAR629G1749 Trochodendron aralioides HOM05D007157 ORTHO05D009045 3.8e-56 223.4 460 55.2
AUR62003414 Chenopodium quinoa HOM05D000173 ORTHO05D006747 3.2e-55 220.3 465 52.7
Gohir.A05G336500 Gossypium hirsutum HOM05D007157 ORTHO05D009045 3.2e-55 220.3 456 54.4
SalBow3G1401 Salvia bowleyana HOM05D007157 ORTHO05D009045 3.2e-55 220.3 442 55.4
BolC9t59142H Brassica oleracea HOM05D007157 ORTHO05D009045 4.2e-55 219.9 453 52.1
Sp6g29920 Schrenkiella parvula HOM05D007157 ORTHO05D009045 6.1e-54 216.1 453 52.3
Aa31LG11G14870 Aethionema arabicum HOM05D007157 ORTHO05D009045 1.0e-53 215.3 481 49.9
A10p24350 Brassica napus HOM05D007157 ORTHO05D009045 1.0e-53 215.3 453 51.7
FAN09G1568 Fragaria x ananassa HOM05D007157 ORTHO05D009045 3.9e-53 213.4 347 66.3
BraA10t44501Z Brassica rapa HOM05D007157 ORTHO05D009045 1.1e-52 211.8 453 51.0
Aqoxy5G03262 Aquilegia oxysepala HOM05D007157 ORTHO05D009045 4.3e-52 209.9 475 52.2
CsaV3_2G034000 Cucumis sativus L. HOM05D007157 ORTHO05D009045 5.7e-52 209.5 230 45.7
Gorai.012G084300 Gossypium raimondii HOM05D007157 ORTHO05D009045 1.3e-51 208.4 456 53.9
MELO3C008172.2 Cucumis melo HOM05D007157 ORTHO05D009045 2.2e-51 207.6 229 45.4
GSVIVG01033052001 Vitis vinifera HOM05D007157 ORTHO05D009045 6.3e-51 206.1 465 51.4
EL10Ac6g15443 Beta vulgaris HOM05D007157 ORTHO05D009045 6.9e-50 202.6 462 50.2
Nitab4.5_0000519g0020 Nicotiana tabacum HOM05D007157 ORTHO05D009045 1.5e-49 201.4 457 48.8
Eucgr.H03351 Eucalyptus grandis HOM05D007157 ORTHO05D009045 2.6e-49 200.7 229 45.4
PSO017G3067 Papaver somniferum HOM05D007157 ORTHO05D009045 5.9e-49 199.5 460 51.7
Migut.H00838 Erythranthe guttata HOM05D007157 ORTHO05D009045 3.8e-48 196.8 434 54.4
Lj5A791T21 Lonicera japonica HOM05D007157 ORTHO05D009045 5.0e-48 196.4 461 47.5
Ah.03g148180 Amaranthus hybridus HOM05D007157 ORTHO05D009045 5.5e-47 193.0 431 42.9
Thhalv10012953m.g Eutrema salsugineum HOM05D007157 ORTHO05D009045 5.5e-47 193.0 241 41.9
AT5G14080 Arabidopsis thaliana HOM05D007157 ORTHO05D009045 3.6e-46 190.3 453 50.1
Cpa.g.c35912 Carica papaya HOM05D007157 ORTHO05D009045 4.6e-46 189.9 227 44.5
Carub.0006s1227 Capsella rubella HOM05D007157 ORTHO05D009045 7.4e-44 182.6 452 48.7
HanXRQChr17g0551661 Helianthus annuus HOM05D007157 ORTHO05D009045 1.3e-43 181.8 212 48.6
Lsat_1_v5_gn_0_3360 Lactuca sativa HOM05D007157 ORTHO05D009045 1.7e-43 181.4 170 54.7
THA.LOC104802372 Tarenaya hassleriana HOM05D007157 ORTHO05D009045 1.7e-40 171.4 229 39.3
BcaC02g07725 Brassica carinata HOM05D007157 ORTHO05D009045 2.9e-40 170.6 450 48.2
Zm00001eb093300 Zea mays HOM05D007157 ORTHO05D009045 2.9e-40 170.6 231 41.6
CDE01G0454 Ceratophyllum demersum HOM05D007157 ORTHO05D009045 3.8e-40 170.2 456 46.7
CARHR199280 Cardamine hirsuta HOM05D007157 ORTHO05D009045 1.1e-39 168.7 168 48.2
Hund04273 Selenicereus undatus HOM05D007157 ORTHO05D009045 5.5e-39 166.4 429 49.7
ATR0012G053 Amborella trichopoda HOM05D007157 ORTHO05D009045 1.6e-38 164.9 216 41.2
SGA_v2.0_scaffold211G42168 Striga asiatica HOM05D007157 ORTHO05D009045 7.9e-38 162.5 201 47.3
PGR083G0651 Punica granatum HOM05D007157 ORTHO05D009045 1.0e-37 162.2 187 44.9
TAR375G0551 Trochodendron aralioides HOM05D007157 ORTHO05D009045 1.8e-34 151.4 172 48.3
HPP92_009778 Vanilla planifolia HOM05D007157 ORTHO05D009045 1.6e-33 148.3 230 37.0
BolC4t27904H Brassica oleracea HOM05D007157 ORTHO05D009045 1.7e-32 144.8 431 47.3
Nn5g29238 Nelumbo nucifera HOM05D007157 ORTHO05D009045 2.5e-31 141.0 435 44.6
Lj8P534T4 Lonicera japonica HOM05D007157 ORTHO05D009045 3.0e-29 134.0 121 55.4
Cc00_g20250 Coffea canephora HOM05D007157 ORTHO05D009045 2.6e-28 131.0 362 51.9
Actinidia05886 Actinidia chinensis HOM05D007157 ORTHO05D009045 1.2e-22 112.1 102 57.8
FAN09G1907 Fragaria x ananassa HOM05D007157 ORTHO05D009045 3.6e-22 110.5 103 54.4
TPR.G29386 Trifolium pratense HOM05D007157 ORTHO05D009045 3.5e-17 94.0 96 54.2
TAR375G0854 Trochodendron aralioides HOM05D007157 ORTHO05D009045 7.2e-15 86.3 94 48.9
RcHm_v2.0_Chr4g0438541 Rosa chinensis HOM05D005622 ORTHO05D002854 3.6e-06 57.4 206 21.8
Atru.chr11.1653 Acer truncatum HOM05D005622 ORTHO05D002854 6.1e-06 56.6 132 25.8


User provided reference genes

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