Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 0.0e+00 1568.5 839 100.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 0.0e+00 1203.3 844 78.9
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 0.0e+00 1119.4 845 75.3
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 0.0e+00 1089.7 854 71.9
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 0.0e+00 1077.4 841 72.2
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 6.3e-293 1010.7 835 67.9
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.8e-285 985.3 842 67.6
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 6.3e-285 984.2 844 67.7
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 7.7e-283 977.2 753 71.7
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 3.6e-272 941.8 808 64.1
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 3.1e-268 928.7 797 64.2
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.9e-265 919.5 805 63.1
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.3e-263 912.5 631 79.7
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 4.0e-263 911.8 807 61.8
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 1.2e-262 910.2 804 62.2
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 4.4e-262 908.3 804 63.1
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 7.5e-262 907.5 792 62.0
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 6.4e-261 904.4 817 61.8
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 3.0e-258 895.6 831 61.3
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.1e-257 893.6 821 60.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 4.3e-257 891.7 769 62.3
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 4.0e-255 885.2 868 57.4
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 2.6e-254 882.5 791 61.7
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 6.4e-253 877.9 804 60.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 6.4e-253 877.9 836 59.6
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.4e-252 876.7 802 60.3
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 5.4e-252 874.8 862 59.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.3e-250 870.2 765 62.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 6.6e-250 867.8 820 59.4
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 9.5e-249 864.0 781 62.1
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 4.7e-248 861.7 767 62.2
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.4e-247 860.1 832 59.6
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 5.2e-247 858.2 812 58.0
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.8e-247 857.8 750 62.0
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 7.5e-246 854.4 780 60.9
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 2.2e-245 852.8 803 59.4
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 3.7e-245 852.0 772 61.4
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.6e-243 846.7 809 58.2
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 8.6e-242 840.9 721 62.8
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 4.3e-241 838.6 769 60.3
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 2.8e-240 835.9 835 56.2
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 5.2e-239 831.6 768 59.5
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 8.4e-237 824.3 772 59.5
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.1e-236 821.2 769 59.0
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 7.3e-233 811.2 857 54.7
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.2e-232 810.4 801 57.7
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 9.0e-231 804.3 767 57.4
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.5e-230 803.5 775 56.5
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 4.2e-228 795.4 775 56.4
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.0e-226 790.8 805 55.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 5.1e-226 788.5 776 56.3
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.1e-225 787.3 798 56.8
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 3.6e-224 782.3 753 58.3
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.4e-223 780.4 775 56.5
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 3.1e-223 779.2 773 55.5
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 5.3e-223 778.5 774 55.8
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 9.0e-223 777.7 774 55.8
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 1.4e-220 770.4 776 55.7
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.2e-220 769.2 776 54.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.2e-219 767.3 774 55.2
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.6e-219 766.9 772 55.8
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.6e-219 766.9 805 53.9
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 2.1e-219 766.5 862 51.9
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 2.7e-219 766.1 834 52.8
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.7e-219 766.1 862 51.9
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 6.0e-219 765.0 597 71.7
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 3.0e-218 762.7 777 54.2
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.9e-218 762.3 791 55.4
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 6.7e-218 761.5 815 53.3
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 8.7e-218 761.1 769 55.0
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.5e-217 759.6 775 55.2
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.6e-216 756.9 791 55.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.7e-216 755.7 766 54.0
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 8.1e-216 754.6 760 56.3
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.1e-215 754.2 796 53.8
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 3.1e-215 752.7 830 53.7
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.7e-213 746.9 802 54.9
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.3e-208 730.7 816 51.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.6e-208 730.3 825 51.2
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.5e-206 723.8 827 53.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.2e-203 714.1 796 51.6
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.6e-203 712.2 779 52.4
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.8e-200 703.0 706 55.0
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 5.9e-190 668.7 531 69.3
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.9e-189 666.4 632 59.8
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.4e-186 657.5 810 48.3
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 7.4e-185 651.7 782 47.7
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.1e-183 646.4 801 47.8
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 3.8e-181 639.4 699 51.6
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.2e-166 591.3 773 48.4
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 3.5e-166 589.7 551 59.7
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.6e-158 564.3 465 64.5
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.5e-158 562.8 591 54.3
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.0e-157 561.6 805 43.7
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.3e-149 533.9 723 45.9
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-146 524.6 484 60.1
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 7.5e-145 518.8 634 48.1
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 8.0e-139 498.8 589 49.1
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.0e-125 453.8 523 49.9
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 6.6e-125 452.6 465 53.5
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 2.8e-115 420.6 815 35.3
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.4e-111 407.5 866 35.6
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 7.1e-87 326.2 776 33.6
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.3e-83 315.5 277 63.5
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.3e-77 294.7 631 32.8
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 5.9e-73 280.0 403 41.7
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.3e-69 268.1 213 66.7
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-64 252.3 220 62.3
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.3e-61 241.5 200 62.5
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.6e-57 228.8 186 62.4
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.7e-54 217.2 266 50.0
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.4e-53 215.7 220 57.7
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 1.5e-47 195.7 857 25.9
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 8.3e-35 153.3 151 60.9
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 7.0e-26 123.6 110 64.5
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.9e-23 115.5 128 53.9
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 1.2e-22 112.8 167 44.3
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 3.7e-19 101.3 152 38.8
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 3.7e-11 74.7 68 50.0
ECA240G1335 Erigeron canadensis HOM05D001865 ORTHO05D001815 2.5e-07 62.0 223 30.9
Lsat_1_v5_gn_4_184081 Lactuca sativa HOM05D001865 ORTHO05D001815 9.6e-07 60.1 223 30.9
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 1.2e-06 59.7 32 81.2
SMO364G0541 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 3.6e-06 58.2 170 28.8
Sc16g0003200 Simmondsia chinensis HOM05D001865 ORTHO05D001815 3.6e-06 58.2 211 27.5


User provided reference genes

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